Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ---------->DOF2                                                                 --------->ANAC55(1)                                                                 --------->ANAC58                                                                 --------->ANAC55(2)                                                                 --------->ANAC58                                                                 <---------ANAC55(2)                                                         <-----------------AGL1         ------>ZmHOX2a(1)                            <---------ANAC58 --------->TOE2(3) ----------DOF2                                     ----------------------->TaNAC69(2) ---->REM1(1)           --------->SPL7        <-----------GT1    --------->ANAC46     --------->YAB1 ------ANAC81   <----------DOF2    <---------MYB52(2) <---------ANAC58 --------->TOE1(3)   atctttcattcctcccatcttttccctacgctcacaaacaaaccctattaacaattccttcccttacacgtaacctaaagaaatgaaatcagaaccagaa  7501400            --------->AtLEC2    <------MYB83    <------MYB46(1)    --------->ANAC55(2)    <---------ANAC55(2)                             --------->KAN4(2)   --------->MYB111(1)                      <----------DOF2   --------->MYB46(2)                <---------ARR11(3)   --------->MYB59                  <---------GLK1(1)                           <----------DOF2  <---------MYB55(1)            <------ZmHOX2a(2)   --------->WOX13(1)  <---------YAB1         <----- <---------MYB52(1)            <---------ARR11(3) <------ZmHOX2a(2)---------->DOF2            <------   attgttaggtaaccttgcaaaacctagtgccaagatcgaaatctcactttagatcaatcccaaaatccaaaaagattataaactttgtttttgttttacg  7501500                                                                                        ----------->RAV1(1)                                                                                      --------->SPL7                                                                                    <---------SPL7                                                                                   <---------ANAC58                                                                        <---------RVE1(1)                    ---------->DOF2                                     <---------CCA1(1)                  ----------->HVH21                                    <---------ARR14(2)                ----------->RAV1(2)                                    <---------ARR11(3)       <------ZmHOX2a(2)                                        ---------->DOF2    <---------bZIP60(1)      <---------ARR11(3)                          ---------->DOF2      --------->ARR11(3)      --------->ARR11(3)<----------ID1         >>>>>>>>>TBF1--------->ANAC58       --------->bZIP60(1) ----ANAC46<---------ARR14(2)               >>>>>>>>>TBF1   --------->ANAC58       <---------ANAC58 ---TOE2(3)--------->ARR14(2)            >>>>>>>>>TBF1    ---------->DOF2       <-----------RAV1(1)   tagatggagatcaaatccacctgaaagaaacaaattttaagaagaagaagaagaaagcagagaagcaaaagaagatatttttgtgtcgtcccacaatgga  7501600                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                <---------ANAC46                              <---------ARR11(3)                                <---------ANAC58                   <----------DOF2                                --------->ALFIN1                  <---------ANAC58             ------                   --------->DAG2                                 <---------ANAC46             <-----                  ---------->DOF2         ----------->HVH21    <--------P     --------->ARR11(3)             ----------->RAV1(1)<---------ANAC58    <-----------HVH21     ===========================            <----------ID1    --------->ALFIN1      <---------RAP2.6(3)   ---------->DOF2  --------->LBD16            --------->ANAC58  <---------ANAC58   --------->At4g35610   --------->ANAC58  <---------LBD16            --------->ANAC58  <---------ANAC46   <---------At4g35610   --------->ANAC58----------->HVH21           --------->SPL7     <---------ANAC58   --------->ZAT14  <---------ANAC58 <---------CCA1(2)   ttccatacgaggggacgacaaaaagcttaggggtgtgtgtgtgtgtgactctgcggtcatgtctggttgcttcaagtaaagatccctatctcacgggaac  7501700                                  <------MYB83                                 <---------AtMYB61                                 ----------->ARR10                                 --------->MYB46(2)                                 --------->MYB52(2)                             <---------MYB46(3)                          <---------ANAC58                         <---------MYB46(3)                    --------->ARR11(3)                   <------MYB46(1)<------MYB46(1)                   <------MYB83  --------->MYB111(1)              --------->ALFIN1   --------->MYB59            <---------bZIP60(2)<---------MYB52(1)            <---------ANAC58 <------MYB46(1)            ==========================MYC_MYB            --------->O2 --------->MYB55(2)               --------->ALFIN1            ========================MYC_MYB             <---------ANAC58            <---------ANAC46 <------MYB83       <------ZmHOX2a(1)            <---------TGA1a  --------->MYB52(2)<------MYB46(1)       --------->ARR11(3)          <---------TGA2(2)<--------P        <--------P <---------ANAC58         ----------->TGA1--------->ATHB12 <---------ZAT6<---------ANAC46         ----------->HVH21<---------ANAC58<---------AtMYB61          <---------ARR11(3) --->GLK1(1)<---------O2<---------AtMYB61 --------->ALFIN1----------->HVH21                      ---- ----GLK1(1)<---------ANAC58 --------->MYB55(2)<------MYB83     --------->ALFIN1        <----------DOF2 =====================bZIP_DOF<-------GAMYB<---------MYB46(3)<---------AtMYB61----------->HVH21 <----   tcggattgtacatgacgtggaaggtattggttggttaggtccgagtggtaggagaatggcgtgaaggtggagatgttcgggtgactcggtcttttacata  7501800                                                    <---------------AGL15                                                    ------>ZmHOX2a(1)                                                    --------------->AGL15                                                   --------------->AGL15                                                   <-----------------AGL2                                                   --------->TOE2(3)                                                  ----------------->AGL1                                                  <-----------------AGL1                                                  ----------------->AG        --------->ARR11(3)                                                  <-----------------AGL2      <---------ARR11(3)      <-------MYC3                             <----------DOF2     <----------DOF2      ------->MYC3                             *TSS----------------->AG      --------->CCA1(1)   ----------->RAV1(1)                        <---------ICU4      <---------ICU4                    < ----->ANAC46                           <---------ICU4          --------->GLK1(2)                   < ---TEIL                                --------->YAB1 <------------CBF      --------->RVE1(1)  <----   cacagccacatgtttttgttatctctctcttggctaacttcatcatcatctttcctaaattgggctaatctttagcgaaatatctgtttctgatcacgat  7501900                                   <---------DEAR3(1)                                   --------->ETT(1)                                <------MYB46(1)                                <------MYB83                           --------->ALFIN1                         <---------ANAC58                         <---------bZIP60(2)                         --------->DEAR3(2)                         <---------ANAC58                         <---------SPL7                         <---------ANAC55(1)                      ----------->HVH21                         <---------ANAC46                     <------MYB46(1)          <-----------RAV1(1)  --------->MYB59               <---------AtMYB61        <------------CBF<------NtERF2<------NtERF2     <---------LBD16        <------MYB46(1)    --------->ZAT6      ----------------->AGL1     <---------SPL7 <---------DEAR3(2)  <-----------GT1     --------->ALFIN1         <-----------GT1<------MYB83 <------ZmHOX2a(1) --------->ZAT14    <---------HSFB2a(1)      <---------ANAC58--------->MYB59  <---------MYB46(3)    = ----------DOF2     --------->HSFB2a(1)      <---------ANAC58<---------MYB46(3)      <------ZmHOX2a(1) ---------DAG2      --------->HSFC1(2)    <----------DOF2  <---------MYB52(1) <------MYB83          - --ZmHOX2a(2)      --------->DAG2<-----------HVH21<---------DAG2 --------->ETT(1)   <----------ID1 <-   cactttacactattgtgggagaaggtgccgtgttcggtcggagtctttcttaccttacgcggtttggtcggaccgaaggatggtttaggacaaaacccat  7502000                    <-------MYC3                    ------->MYC3                    <-------MYC2                    ------->MYC2                    ------->PIF4                    <-------PIF5                    ------->PIF5            --------->TGA1a                    ------->MYC4            --------->O2                    <-------MYC4            <---------TGA1a                    <-------PIF4            <---------O2                                         <---                   --------->ANAC46      <---------WRKY38(1)                           <---------ANAC58                   <---------TGA1a       <---------ETT(2)                 <---------ANAC58       ====                   --------->O2          <---------WRKY12                 --------->O2 <---------ANAC58                   --------->TGA1a ---------->DOF2                        --------->ANAC55(2)    <---                   <---------O2    =================================================bZIP_DOF     ----             --------->GLK1(1)     ===================bZIP_DOF            <---------ANAC46       <---             <---------GLK1(1)   ----------->HVH21                        <---------O2 <---------ANAC46    <------ZmHOX2a(1)          <---------ANAC46                           <---------ANAC55(1)    <--- ============================bZIP_DOF    --------->ETT(2)                 <---------ANAC58       ---- --------->DOF2    ===========================bZIP_DOF                    <---------bZIP60(2)    <--- -----ZmHOX2a(1) <------------OsbHLH66   <---------DEAR3(1)--------->ICU4 <---------TGA1a--------->ALFIN1   aggaaaggaccatggatttccacgtgccgaagcgcgtgaaaggtcgacgtctcgttgtggaatttttaaaattttgacgtgttaagagagcgtgtgcata  7502100        <---------At4g35610        --------->PCF2                                                                      ---------   <---------ANAC58                                                                       <---------O2   <---------ANAC58                                                                       --------->TGA1a ------ANAC58                                        --------->ARR11(3)                   --------->bZIP60(2) =============================================bZIP_DOF                                    <---------TGA1a ------ANAC46                                    <---------AtLEC2   <---------ANAC58      --------->O2 ----->O2 --------->ZAT18                    <----------DOF2        <---------ANAC46 --------->ANAC58 ------ANAC58                            ------>NtERF2              <---------ANAC58 --------->ANAC58 ------TGA1a                            <---------PCF2        <---------ARR11(3)  <---------REM1(1) ----->TGA1a       <-------TEIL    <----------DOF2   <---------ARR11(3)        --------->ALFIN1 ------O2 <---------ZAT18  <---------ZAT6<---------ZAT18      --------->ARR11(3)<---------MYB46(3) --   cgtgggcttgagcccactagtttcatttagtgtgagtctttggggccctttgcaagattttagacatcttacttggagacagtggtgaagcaacgtgacc  7502200                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                   --------->YAB1                                                     <---------YAB1              <---------TOE2(3)                                                   <---------ANAC58        <---------AHL20(2)    ----                                                   <---------ANAC46        --------->AHL20(2) <------                                      ------->GAMYB--------->ANAC55(2) <---------AHL20(2)    <-------                                    <---------At4g35610     <---------TOE1(3)  <---------AHL20(2)<---                                    --------->At4g35610   ---------->DOF2 <---------AHL20(2) <-------     --------->ALFIN1        --------->YAB1        <---------ANAC58    --------->AHL20(2)    -------- <---------At5g28300       <---------WOX13(1)   <----------DOF2    <---------AHL20(2)  ----------->GT1 -->HVH21             --------->At4g35610    <-----------GT1<---------TOE2(3) --------->AHL20(2)<---- --------->HVH21      <---------At4g35610 <---------ICU4<---------YAB1<---------AHL20(2)     --------   agtgaccgtgtgagactgtgagtcatctcattgatgacaactgaaaattactttcgtgattaaaggtttttatttatttatttaatgatatgtaatataa  7502300  Previous    Next  AGI:  At3g21320.1    Description:  similar to ELF3 (EARLY FLOWERING 3) [Arabidopsis thaliana] (TAIR:AT2G25930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45746.1) Range:  from: 7499059    to: 7501847    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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