Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                           --------->TOE2(3)                                          --------->ARR14(2)        <------ZmHOX2a(1)  ------->GAMYB                                              <---------ARR14(2) --------ALFIN1           --------->MYB46(3)                  <---------GLK1(1)      ------>MYB46(1)< ------->ZAT6         <---------MYB59                         --------->GLK1(1)      ------>MYB83   - ---->REM1(1)       <-----------ARR10             <---------MYB46(3)               <xxxxxxxxxxxxxxxxx ->TOE1(3)         --------->GLK1(1)             --------->ALFIN1    --------->MYB52(1)      --------   aacactgccaggaccatcagggtatctaaccacaacgacttgacaaacacagtggtgaacacagaaatcactaacagagccatcaccaaatcccataatc  7440400                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                  --------->GLK1(2)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                           --------->ALFIN1 ---->YAB1                     ---------->DOF2                         <---------ANAC58<---------ZAT2 ---------ZAT14            --------->ANAC58               --------->WRKY12<-----------HVH21 -------->ZAT14  <---------MYB52(1)                       --------->WRKY38(1)    <---------GLK1(1) xxxxsmallRNA(fl3)         --------->ANAC58           --------->ICU4   <---------ANAC58--------->ZAT2 ->YAB1        <---------MYB46(3)                --------->YAB1      ------->TEIL--------->GLK1(1)   agagcagtgagattgagccgttgagtctcaagacaaagcctctctctcttatcgtaatctttgactgtatgaatcgtgtgagggaatccagcttccttca  7440500               <---------MYB52(1)              --------->LBD16             --------->ANAC46            ------>ZmHOX2a(2)           --------->CCA1(2)           --------->ARR14(1)           <------ZmHOX2a(2)          --------->ARR14(2)          <---------ARR14(2)          --------->AGP1          --------->ARR14(3)          <---------ARR14(3)                       <-------GAMYB                                    <          <---------ARR11(3)                      <---------MYB46(3)                    =============          --------->ARR11(3)              <---------REM1(1)                    <---------ARR14(2)   -         --------->GLK1(1)                <---------ANAC46                     --------->ARR14(2)   <         <---------GLK1(1)                <---------ZAT6                   --------->ANAC46        <-        ----------->ARR10               <---------MYB46(3)              <---------ARR11(3)       ====       --------->LBD16                 --------->ALFIN1                 --------->ARR11(3)       ----      --------->LBD16                  <---------DEAR3(1)               <---------ARR14(2)      <----     <---------HSFB2a(2)               <---------AtMYB61                --------->ARR14(2)     ------     --------->HSFB2a(2)            <---------DEAR3(1)                ---------->TaMYB80---------->DOF2 <---------ANAC58               ---------->DOF2 <------ZmHOX2a(1) ----------->GT1    ------>NtERF2<-- <---------ANAC58  <----------DOF2  --------->ALFIN1             ----------->GT1   --------->At4g35610   atggcttcccgagatccgctactttggagaaaatagaagcggtggtgtaaggaggttgagtttggagagggtaatatccccaatcggctccaaagagacc  7440600           <---------ANAC58           <---------ANAC58           --------->O2           <---------TGA1a           --------->TGA1a           <---------ANAC46           <---------ANAC55(2)           <---------O2           <---------ANAC55(1)          <-----------------------TaNAC69(2)    <------MYB46(1)    <------MYB83          <---------bZIP60(1)  <--------P              --------->bZIP60(1)  ===================MYC_MYB <-------GAMYB          <---------ICU4 ====================MYC_MYB ---------DEAR3(2)      --------->YAB1 ====================bZIP_DOF               <---------REM1(1)     --------->MYB52(1) -------->MYB55(2)     --------->ICU4   <---------ANAC46         ------->GAMYB ---------MYB46(3)   <---------ICU4   --------->MYB52(1)        <---------MYB55(2)                --- --------DEAR3(1)    --------->YAB1  ----------->TGA1           <---------MYB52(2)                <-- ====================MYC_MYB <---------ANAC58                 --------->MYB52(1)                 <--- -------->AtMYB77   --------->ICU4   ----------->HVH21   ------->GAMYB  --------->ZAT14     --------- -----DEAR3(1)--------->REM1(2)--------->ATERF1(1)      --------->MYB46(3)                  <-------- --->DEAR3(2)--------->ALFIN1<---------ANAC58    --------->ICU4 --------->MYB46(3)          --------- -------MYB52(1)  --------->YAB1   ----------->RAV1(2) --------->At4g35610      <----------DOF2 <----   ggcggttggagagacgtgtagaataatgatgtcgtctccctgacggatgtagttatcaacagcccaacgaacagtgaaggcactttcttcagagagctcc  7440700                             <---------REM1(1)                         ======================HOX2a_HOX2a                         <------ZmHOX2a(1)  --------->GLK1(2)                   <---------DOF5.7(2)     --------->ARR14(2)                  --------->WRKY38(1)      <---------GLK1(2)                  --------->WRKY12         <---------ARR14(2) ------>ANAC46    ----------->HVH21     ------>ZmHOX2a(2) -------DEAR3(1)  --------->WRKY45   --------->ATHB12   <---------ICU4 ------LBD16     --------->DOF5.7(2)<---------YAB1     <---------YAB1      --------->HSFB2a(2) >At4g35610    <---------ANAC46   =============HOX2a_HOX2a                 <---------HSFB2a(2) -At4g35610   <---------TOE2(3)   <------ZmHOX2a(1)  --------->YAB1    <---------ANAC58 >GLK1(1) <---------ATHB12 --------->At4g35610<---------LBD16  <<<<<<<<<TBF1 -----ALFIN1  <---------TOE1(2) <---------TOE2(3)   <-------TEIL       <---------ANAC58   acggcgattccaatcttacgttgacgaggagatgaaggatgatcggattctggattcatcatttcttcttcttgcttccacaaacttccgatttttttct  7440800                                               <---------TOE2(3)                                   <---------ICU4                                   -------->HAHB4                                   --------->ATHB12                               --------------->AGL15             --------->ANAC55(2)  --------->ICU4----------->GT1                              <-------             <---------ANAC55(2)  <---------ATHB51                                           --------             <---------ANAC46  <---------------AGL15                                   ----------->GT1             <---------ANAC55(1)*TSS      --------->ICU4                             <---------ANAC46       --------->AHL20(2)     ----------------->AGL3                                 <---------ANAC58       <---------AHL20(2)     <-----------------AG                                   <---------AtLEC2      <---------AHL20(2)      <-----------------AGL3                             <----------DOF2 ----      --------->AHL20(2)      <-----------------AGL2               <---------ANAC46  <---------ANAC58   tagggtttttaaattatgtgttatgcagcattgctaattatgggataatgaggtttatatttatgggttttgtgcaaatgtttctttgcttgtaaaaaat  7440900                                                             --------->ANAC58                                                       --------->HSFB2a(2)                                               ------>ZmHOX2a(1)                 --------->MYB52(2)           --------->TOE1(3)                              --------     <---------MYB46(3)                       --------->TOE2(3)                              --------  <----------DOF2<---------MYB46(3)       --------->GLK1(1)  --------->ANAC58                -------- --AHL20(2)    <---------MYB52(1)      >>>>>>>GRF7 <---------GLK1(2)     --------->REM1(1)  --------- ->AHL20(2)  <---------ANAC58         <-----------RAV1(2) <---------REM1(2)                ---------- ----->YAB1  <---------ANAC58       <-----------HVH21  <---------HSFB2a(2)         <----------DOF2   tatactttggttaatgcgtttgttatcccttgcatttttgtcaggtttccttagcttctcgacaaggaaaatgctacatcgttttcttttaaaaaaagca  7441000                                                           <-------MYC2                     <--------                                                           <-------MYC3                     ---------                                                           ------->MYC3                <---------DOF5.7(2)                        ----------->GT1                    ------->MYC2            --------->ANAC58 <                  <---------WOX13(1)                     ------->TEIL              <---------ANAC55(2) --->GT1         <---------ANAC58                     --------->AtLEC2             --------->ANAC55(1) ->ANAC58        <---------ANAC58                     --------->ANAC58             --------->ANAC46-- ->ANAC58        <---------ANAC46                     --------->ANAC58             --------->ANAC55(2) >DAG2       <---------ANAC58                  <----------DOF2                     --------->ANAC58-- >DOF2       <---------ANAC58 --------->AHL20(2) ----------->HVH21       ------>ZmHOX2a(1)  ------->TEIL   aaatagtagtctctgtcttgcttgatgagaaaataaacaaacaatttgtctttgacatgcacgttgaaagttttcctctaaaaacacgtaaacgtatttg  7441100                                                       --------->ANAC46                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                    <-----------GT1                                                   <---------CCA1(2)                                                   <----------TaMYB80                                                   --------->GLK1(1)                                                   <---------GLK1(1)                                                  ----------->ARR10                                                  --------->ARR14(2)                                                  ---------->TaMYB80                                                  <---------ARR14(2)                                               <---------ANAC58                                               <---------ANAC58         ---------->DOF2                       <---------ANAC46                              <------- -ARR14(2)                                    <------NtERF2                         --------->WOX13(1) >ARR14(2)    ----------------->AGL1        <---------DEAR3(1)              --------->At4g35610 ---------MYB59                            --------->ATERF1(1)           ---------->DOF2--------->WOX13(1) --------------->AGL2                      <---------ABI4(1)          --------->AtLEC2<---------ATHB12 --------------->AGL1   --------->At4g35610--------->SPL7    ---------->DOF2<---------At4g35610   ggcctaattcagaaaggcctaaaatgggctgagaacgagtatggggacggcgtatatccgtctcaaagaaccattcaaagctgaaacaatcaatcgcgac  7441200                                                              <---------YAB1                                                     <---------ANAC55(2)               <---------MYB46(3)                                                     --------->ANAC55(2)               --------->MYB52(2)                                                     --------->ANAC46                <---------MYB52(1)                                                     --------->TGA1a               <---------ANAC58                                                     --------->ANAC58           --------->LBD16                                   --------->ANAC58  --------->bZIP60(2)       <---------ANAC58                                   --------->ANAC58  --------->ANAC58          <---------ANAC58                                  <---------GLK1(1) <-------TEIL<---------GLK1(2)<---------MYB52(1)  <-------TEIL                   ---------->DOF2--------->ANAC46--------->ARR14(2) <---------ANAC58 ---ID1                          ==============================bZIP_DOF------>ZmHOX2a(1)   aaggttcacttctccctctccaaaatggtccgatggaaagcctcagaaaccaggcacgttactcacgattctcctccctctccgtgcgtttgttccacca  7441300  Previous    Next  AGI:  At3g21210.1    Description:  protein binding / zinc ion binding. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G34480.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 7437970    to: 7440832    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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