Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    xxxxxxxxxxxxxxxxxxx                                                                               <---------AtMYB61        --------->ANAC58                                                     <---------MYB46(3)        --------->ANAC58                                                   <---------ANAC58        <-     <------ZmHOX2a(1)                  --------->CCA1(2)                  <---------ANAC58        <-   <---------------AtSPL8              --------->ARR11(3)                 <---------MYB46(3)      --- -------->DOF2              ----------->HVH21                    --------->DEAR3(1)               <-- -TOE2(3)                --------->GLK1(2)                      --------->ANAC46<---------MYB46(3)<--   tgaaagaggaacgcaatttagttttaaaatctgacatattagatatagttgagtcaattgttttccaccgaagaattggttgtggttccatctaacttaa  7421600                                          --------->YAB1                                          --------->AHL20(2)                                         <---------YAB1                                       --------->YAB1                                       <---------ICU4                                      --------->ICU4                                      <---------YAB1                                     <---------AHL20(2)                                     --------->AHL20(2)                                    --------->YAB1                                   <---------AHL20(2)                                   <---------YAB1               ----------->GT1  --------->ARR11(3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------YAB1       <---------AHL20(1)      <---------ZAT6            --------->AHL20(1) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------AHL20(1)                                  <-------TEIL xxxx>smallRNA(si3)             --------->AHL20(2)                                    ----------->GT1 --------RVE1(1)                <---------ARR11(3)                                   <---------------AtSPL8 --------CCA1(1)               --------->CCA1(2)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>ARR11(3)              <---------ARR11(3)          --------->MYB46(3)    <---------TOE2(3) -------AHL20(1)              --------->ARR11(3)<---------YAB1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -------ARR11(3)            <---------ZAT6<---------AHL20(2)    <----------ID1 ---------->DOF2      -   gatattttgtgttaagatggtttatttgtagagatatattataattatatatgatttctaaccaaaacaacaagaagtttttaaagatgggtacaaattg  7421700                                          --------->ARR11(3)                                          <---------ARR11(3)                                         --------->GLK1(1)                                         <---------GLK1(1)                                         --------->RVE1(1)                                         --------->CCA1(1)                               --------->TOE1(3)                                         <---------RVE1(1)                           <---------RAP2.6(2)                                         <---------CCA1(1)                       xxxxxxxxxxxxxxxx>smallRNA(i)                                        <---------ARR11(3)                      --------->TOE2(3)                                ---------->DOF2                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <------MYB46(1)                           <---------ANAC46------>NtERF2                            <------MYB83--------->ARR11(3)            <---------ANAC55(2)--------->TOE2(3)      <---------TOE2(3)     ----------->GT1             ----------->GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-----------GT1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   ---------->DOF2   <xxxxxxxxxxxxxxxxsmallRNA(i) -------->AHL20(2)    <---------YAB1---------->DOF2---------->DOF2    ----------->GT1--------->ETT(2)   aattaactaatgtaattccacattgtcatttggtaaaagaaagatatcttgacaaaagagattaaaagaattatgtgaaaaaccttggcgaccttaaacc  7421800                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <--------HAHB4                         <---------ICU4                         --------->ATHB12                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 <----------DOF2                        --------->TOE1(3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->TOE2(3)                           <              --------->ARR11(3)           --------->ARR11(3)                                     ---              <---------ARR11(3)           --------->ARR14(2)                --------->TOE2(2)   xxxx             <---------CCA1(2)             ------->TEIL----------->RAV1(2)   --------->TOE1(2)  -----         <----------DOF2--------->ICU4     <---------ARR14(2)      ---------->DOF2     xxxxxxxxxxxxxx      <---------ARR11(3)<---------YAB1    <---------CCA1(2)   --------->MYB46(3)   ------->TEILxxxxxx   atctccaatgtctttatatctttggcatcattaagagtaaatgtgtatcttgatcaaacctgaaaccactaaagaaaaacatatgaactcaaatagaggc  7421900           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------------AtSPL8   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <---------MYB52(1)   <---------TOE2(3)                                   <---------SPL7  ---------->DOF2                                    <------NtERF2 <---------AHL20(2)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              <-------- --------->AHL20(2)          <-----------HVH21     <---------DEAR3(1)                   ------>NtERF2 xxxxxxxxxxxxxxxxxxsmallRNA(si3)     <----------DOF2------>NtERF2 ---------->DOF2      --------->DEAR3(1) ------>WOX13(1)            <---------ZAT6         --------->ANAC46                  ------->GAMYB xxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC58  --------->DEAR3(1)         <------ZmHOX2a(2) ------------>AGL3        <---------ANAC58        --------->ATERF1(1)        <---------ARR11(3)------ xxxxxxxxx>smallRNA(si3)  <---------ANAC58 ---------->DOF2       xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(i2)  --------->ANAC58<---------ATERF1(1)         --------->ARR11(3)<-----   caattaaagatgaggtccaaagaatagggagtgtcaagcctttcacaaagacgacgccgtttggctaaaaaaggcccaagatcacaacgacgacgtttgc  7422000                                                                                              <------                                                                                             --------                             --------->TOE2(3)                                               <-------                            <---------ICU4                                                  <--------                            <------------ATHB5                                              <--------                            <--------HAHB4                               ---------->ID1     ---------                            --------->ATHB12                        <----------DOF2        <---------                            -------->ATHB1                    --------->At4g35610          <---------                            --------->YAB1                    --------->HSFB2a(1)          <---------                           <---------ATHB12                   <---------HSFC1(2)--------->TGA1a<-----                           --------->ICU4                     <---------At4g35610        --------->WRKY12                           <---------YAB1                     --------->ZAT2    =====================             --------->GLK1(2)                                --------->HSFC1(2)--------->O2---------             <---------ARR11(3)           <----------ID1==================================bZIP_DOF       ----------->GT1 ------------>CBF   *TSS    --------->AHL20(2)======================bZIP_DOF -MYB52(1)   --------->ARR11(3)           ----------->GT1     <---------HSFB2a(1)        --------->WRKY38(1) --->At4g35610         --------->ZAT14  ---------->DOF2 ---------->DOF2 <-----------GT1 <---------MYB52(1) ----At4g35610     --------->ZAT6       ==================================================bZIP_DOF   tgaagaaaaatgaaaaatctttcactacaatcattagaccaaaaaagaaaaaaaaaatcaaaggagcttccttttttcgctctcgtctccgtttaccctt  7422100       ---------->ID1 ---DAG2 ------->AGL15 --------AGL15 ---------AGL1                                                    --------->LBD16 ---------AG                                                     <---------ANAC58 -------->AGL1                                                   <---------ANAC46 --GT1<-----------GT1                               <----------DOF2 --------AGL1                                 <----------DOF2    <---------ANAC58 --------AG                <----------DOF2  ------>ZmHOX2a(1)  <---------ANAC46 -----DOF2            <-----------GT1   <---------ARR14(2)     <---------ANAC58 =====bZIP_DOF   <----------DOF2        --------->ARR14(2)     <---------ANAC58 -------->AG    --------->TOE2(3) --------->YAB1 <---------ARR11(3)              ---------->DOF2   ttgggatttttccctaaacctttttctctctttgtataatcaaatcctctttatctttcattgtttcgcgtgaattagctctgcaaaggctcttcattct  7422200               --------->ZAT14               <---------ZAT18                                           --------->ANAC46               <---------ZAT14                                 --------->ZAT18            ------>ZmHOX2a(1)                                <---------WOX13(1)        <---------GLK1(1)                                   <---------ANAC58  <---------ANAC46    --------------->AtSPL8                <---------ANAC58  <---------ANAC58    --------->DAG2                       --------->ATHB12----------->HVH21  <---------ANAC58  ---------->DOF2                       <---------YAB1 --------->O2            ----   tctcgcttggattcctctgcacaaaaggtacccatttgatgtcaattttggtttattgttttgattgccctgtccaagtgacaagtctttgtatgtatga  7422300                                                                          --------->ARR14(2)             >>>>>>>ZML2            --------->ARR14(2)                    <---------ARR14(2)        <------MYB46(1)             <---------ARR14(2)              <-----------RAV1(1)        <------MYB83            ---------->ID1                  --------->AHL20(2) ----->CCA1(2)             ------->TEIL     ----------->GT1     <---------AHL20(2)   tataggtagtgggttctagtttgtagatgaacttgtcgaatttggagggtttttagttggaagcatttatatgtgggatttggaattgttctgtctattt  7422400               <------MYB83               <------MYB46(1)                                                         <---------DAG2             --------->ALFIN1                                                          <----------DOF2             <--------P                                                   <---------YAB1           --          <---------TOE2(3)                                            --------->GLK1(2)           <-          <---------TOE1(3)                                            ------->TEIL ------->TEIL-----        ---------->DOF2                                      <-----------GT1 <---------WOX13(1)<-----      <----------DOF2                                       <-----------GT1--------->ATHB12    ======     --------->TOE1(3)          --------->ICU4         <----------DOF2 <---------ARR14(2)      <-----    --------->At4g35610      <------ZmHOX2a(1)    <------ZmHOX2a(1)    --------->ARR14(2)    <-------   gttcttagcttaaaggttgggacttagcttaggacttatgagcatgagagaaggagactttttttccaattcgaatctgattgatgaaactttttttact  7422500  Previous    Next  AGI:  At3g21175.1    Description:  ZML1 (ZIM-LIKE 1); transcription factor. Identical to GATA transcription factor 27 (TIFY2B) [Arabidopsis Thaliana] (GB:Q8GXL7;GB:Q8LF08;GB:Q94B66;GB:Q9LU42); similar to ZML2 (ZIM-LIKE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51600.2); similar to ZML2 (ZIM-LIKE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41658.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679); contains InterPro domain CCT (InterPro:IPR010402); contains InterPro domain ZIM (InterPr Range:  from: 7422042    to: 7424911    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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