Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------YAB1                                               <---------AHL20(2)                                              <---------AHL20(1)                                              <---------AHL20(2)                                              --------->AHL20(1)       <---------DAG2               <---------MYB52(1)       <----------DOF2    ----------------->AGL3 ---->CCA1(2)          <---------At4g35610    --------->AHL20(2)       --------->ANAC46 --->ARR11(3)          --------->At4g35610<-----------------------TaNAC69(2) ----ARR11(3)          --------->ZAT18--------->MYB59         ----------->GT1             <----------   atacaattactttttgttttttgtgagcaccatgtttagttagttcaatataatggctaaacacttgtaaaacaaacaactaatagacattttttcaaaa  7405900                            ------>ZmHOX2a(2)                          <-----------ARR10                   <---------DAG2                   <----------DOF2             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           <---------AGP1 <---------AGP1           --------->AGP1 <---------ARR11(3)           --------->ARR11(3)           <---------ARR11(3)    --------->ATHB12           <---------ARR14(2)   <---------YAB1                   ---------->DOF2           --------->ARR14(2)  >>>>>>>>>>>>>>>>>LFY     --------->AHL20(2)          <---------CCA1(2)<---------GLK1(1)            <---------AHL20(2)         ----------->ARR10--------->ARR11(3)        --------->AHL20(2) -GT1 <----------DOF2    <---------CCA1(2)          <---------AHL20(2)                <-----------GT1   tttgaaaactttagatcttcactttttggatctcaccattggactctctcaaaattaaaaaaatactcaaagtgtctaaatttttgattttctattttta  7406000                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                <---------ARR11(3)                                --------->ARR11(3)                        --------->ICU4  <------------CBF                     ------>ZmHOX2a(1) --------->ATHB12                     ===================HOX2a_HOX2a                    <---------MYB59   <---------YAB1                   ------>ZmHOX2a(2) ------>MYB83                   ========================HOX2a_HOX2a                   ===================HOX2a_HOX2a                  <------ZmHOX2a(2)  -------->P                  ====================HOX2a_HOX2a                  =========================HOX2a_HOX2a                 --------->ARR14(2)  ------>MYB46(1)                 <---------ARR14(2) ------>ZmHOX2a(1)          --------->ATHB12      --------->ARR14(2)          <---------AHL20(2)    <---------ARR14(2)                                                  <          --------->AHL20(2)   <------ZmHOX2a(1)                                                    -          --------->ATHB51   <---------TOE2(3)                                                   ----         <---------AHL20(2) <-----------GT1                        <------ZmHOX2a(1)   --------->ARR11(3)       --------->YAB1====================HOX2a_HOX2a     ------------>CBF              <---------ARR11(3)   aaattacaaaaattatttggatcctaatttttaggatcctaccattggtgaagagcacctccaatgggaggatgtaatccaaaatttgagatgttctctt  7406100             --------->YAB1        <---------YAB1            --------->AHL20(2)    --------->AHL20(2)  <------------CBF           --------->ICU4 -------->ATHB1        --------->YAB1 --------->ATHB51   --------->WOX13(1) <---------ICU4    --------->AHL20(2)                                               --------->ALFIN1 --------->ATHB12  <---------AHL20(2)         --------->ZAT2                       <---------HSFC1(2) ---------ATHB51  --------->AHL20(2) <------------CBF                         --------->YAB1 -------->ICU4--------->AHL20(2)  <---------AHL20(2) <----------DOF2<---------MYB46(3)     ---------- -------->ATHB5 --------->YAB1----------->GT1 <---------ZAT2      <------------CBF --------->HSFC1(2)   gaattattggcaaaataaaaataaatcagaagtgattaaaattgacagagctcggctttgtgaagagagattgttgagaataagaagtgtcccaaaagcc  7406200                                                                                                   --                                                                                                 ----                                                                                                 ----                                                     --------->TOE1(3)                 ------------>CBF                                                     --------->TOE2(3)                --------->TOE1(3)                                           <---------MYB59                            --------->TOE2(3)     <---------At4g35610                 <---------ARR11(3)                     --------->TOE1(3)====     --------->At4g35610                <---------CCA1(2)                       --------->TOE2(3)<--- >DOF2    ------->TEIL       ---------->DOF2        --------->ZAT6             --------->ZAT6    <---   caaatttagctgaatctaagacgaagcccataaaagaagcatatatctaacttaaccctaatttctaagtattctaacttaaccctaacctcaattccca  7406300                                                                           ------>NtERF2                                                          <---------ARR11(3)                                                     ------>ZmHOX2a(1)     --------->LBD16                                                <------MYB83              <---------ANAC46                                                <------MYB46(1)        <---------ARR14(2)                                               --------->MYB59         --------->ARR14(2)                                            <---------ARR14(2)       --------->HSFB2a(1)                                       --------->LBD16    --------->ARR14(2)     ------->TEIL                                     <---------LBD16 <---------HSFB2a(2)  <---------RAP2.6(2) --------->HVH21                 <---------At4g35610<---------LBD16 <---------TOE2(3) ----->TGA1a             ------------>CBF  <------ZmHOX2a(1)        <---------TOE1(3) ----->O2             --------->ANAC58--------->HSFB2a(2) <---------ARR14(2)    <---------CCA1(2) ===================bZIP_DOF    ------->TEIL--------->ARR14(2)      <---------TOE1(2)      --------->ANAC58 ------TGA1a          --------->ANAC58<---------HSFB2a(2) --------->ARR11(3)  <----------DOF2 ------O2<----------DOF2--------->YAB1<---------ANAC46  ----------->ARR10<---------LBD16   --------->ANAC58   agtgacattcgctttcaaggcttcaagcacaatgcatcttccggaggatttggtcctggagatactctctaaggttccggctgtatctctggcacgattt  7406400                                                                        --------->ANAC46      <------                                                                        --------->ANAC58   <---------YAB1                    --------->ANAC58      <----------DOF2               --------->ANAC58--------->ICU4                    --------->HSFB2a(1) <---------HSFC1(2)           <---------WRKY12 ----------->GT1                    --------->ANAC58    --------->HSFC1(2)      --------->SPL7     ==================                    <---------HSFB2a(1) <---------HSFB2a(1)   <---------SPL7   --------->ARR14(2)          <---------At4g35610  <------NtERF2                 <---------ANAC58  <---------ARR11(3)        <---------HSFB2a(2)  <---------MYB46(3)              <---------ANAC58  <---------ARR14(2)        --------->HSFB2a(2)  <---------DEAR3(1)             <---------------AtSPL3 ------>ZmHOX2a(1)   cgatcgacttgcagaagatggaacgctctggtcgtcgatggaagctttgctaagaagcactatgcgtacggtccaaggcagtatcctatagttattatgt  7406500                                               --------->YAB1                                              --------->ZAT6                                             <---------TOE2(3)      <---------------------WRI1                                   <---------AtLEC2              <---------ZAT2                                ------>ZmHOX2a(2)                --------->At4g35610                               <---------GLK1(1)                 <---------At4g35610                               <------ZmHOX2a(2)               <---------ALFIN1                               --------->GLK1(1)           --------->ABI4(2)                              <---------AGP1<-----------GT1------>NtERF2         <-----------HVH21         <---------TOE2(3)    <---------ARR11(3)           <---------ZAT18  --------->MYB52(1)     <- ------>ZmHOX2a(2)            --------->ARR11(3)        ------->GAMYB    <---------At4g35610       -- ---YAB1 <---------TOE1(3)    --------->ARR14(2)     --------->MYB52(1)  --------->At4g35610--------- =======HOX2a_HOX2a           <---------ARR14(2)  --------->YAB1 --------->ZAT2 ----------->GT1------   tgatcgagtttagggtttatttagtgagtatagatctccatggaattaacaataacaacggtgccccatctgcgaagctaacaggtcaattcagcctaaa  7406600                                            <-----------HVH21                                           <----------DOF2                                     --------->MYB52(1)                                    ----------->HVH21                                  <---------ANAC55(2)                                  --------->ANAC58                                             <-----                                  --------->ANAC46                                           <-------                                  --------->ANAC58  <---------ATERF1(1)                    <---------ANAC58                                  --------->ANAC55(2) <---------DEAR3(1)                  <---------MYB46(3)     <----------DOF2              --------->ANAC55(1)--------->ATERF1(1)                  <------MYB83 --------ARR11(3)                <-------TEIL      ----------->HVH21                <------ZmHOX2a(1) ------->ARR11(3)             --------->CCA1(2)<---------At5g28300               <-----------RAV1(2) >TOE2(3)          --------->At4g35610 --------->ANAC58                     ---------->DOF2<---------ANAC58 ---->DOF2         <---------At4g35610 --------->ANAC58------>NtERF2   <---------SPL7     <------MYB46(1)   agaccctctttctaattcttcagaagaagttgatatacgtaacgcctttcactgcgacggcttattgctatgctgtaccaaagacaggagattggttgtt  7406700                                                                                                -----                                                                                          ------>ZmHOX2a(1)                                                                                        =============                                                                                       ==============                                    --------->LBD16                                    =============HOX2a_HOX2a                                  ------->GAMYB                                       <---------GLK1(2)                                ------>MYB83                                          --------->AGP1                                -------->P                                            <---------ARR14(2)                                --------->ANAC46                                      --------->ARR11(3)                                ------>MYB46(1)                                       <---------ARR11(3)                             ------>ZmHOX2a(2)         --------->YAB1                 --------->ARR14(2)                            <------ZmHOX2a(2)    --------->ANAC58                --------->MYB52(1)                            ========================HOX2a_HOX2a              <---------YAB1  ------>ZmHOX2a(1)                        --------->ALFIN1         --------->ANAC46      <---------TOE2(2)------>ZmHOX2a(2)          <-----------RAV1(2)=======================HOX2a_HOX2a        <---------TOE1(2)============= ----ANAC46 --------->LBD16--------->ARR14(2)    --------->ANAC58     <---------STY1(1)<------ZmHOX2a(2) --MYB46(3)<---------ANAC46<---------ARR14(2)------>ZmHOX2a(1)        --------->STY1(1)==============   tggaatccatgttcaggggaaaccaagtggatccaacccagaaattcctacaaggaatcagacttatatgccctaggttacgataacagatcctcctcct  7406800  Previous    Next  AGI:  At3g21120.1    Description:  F-box family protein. Identical to Putative F-box protein At3g21120 [Arabidopsis Thaliana] (GB:Q9LJC0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G21130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60955.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 7406332    to: 7407435    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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