Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                          --------->ANAC58                        <--                                  <----------DOF2    ------>ZmHOX2a(1)                            <--                                 --------->YAB1    ------>ZmHOX2a(2)                              ---                              <---------CCA1(2)   <------ZmHOX2a(2)                              <---                        <---------DAG2           --------->ARR11(3)                              ----              <---------------AtSPL8             --------->ARR14(2)    ----------->GT1           <---              --------------->AtSPL8             <---------ARR14(2)   ----------->GT1            ----    --------->ARR11(3)  <----------DOF2<-----------GT1    --------->ANAC58         <---------YAB1<---   aatagttatcttggtttgagtacaaactttttctatctttatttccatagggatcctgccaagaaatacaataagttaaaatgttctgattcagaacaaa  7389600          --------->YAB1 ----->HAHB4                    --------->ZAT6 ------>ATHB51            --------->ZAT6 -------ICU4            --------->MYB52(1) ------ATHB1            -------->P ------>ATHB12        <---------MYB111(1)                                            <----------DOF2 ------ATHB12         --------->MYB46(3)                                          <---------ARR11(3) ----->ICU4      --------->ANAC55(1)                  ---------->DOF2             --------->ARR11(3) ------AHL20(2)  --------->ANAC46               ----------->GT1        --------->GLK1(2) ----->AHL20(2)  <---------ANAC55(2)          <------ZmHOX2a(1)      <------ZmHOX2a(1) ------ATHB51    --------->ANAC55(2) --------->At4g35610     >>>>>>>>>TBF1       <---------CCA1(2)  -   taattggtctattcagaacacataactaccagtaccactagctcaagaggaagtaaaaaagaagaagaagaggaatctactctaaatctttaactgaaga  7389700       --------->ANAC46   --------->DAG2                                               ----------->GT1       --------->ANAC58   <---------TOE1(3)                                          <---------At5g28300       --------->ANAC58   <---------TOE2(3)                       ---------->DOF2   <-----------GT1 --------->ANAC58    --------->ANAC58                       ---------->DOF2 ----------->GT1 --------->ANAC58    --------->ANAC58                    --------->YAB1   <------ZmHOX2a(1) ------>TEIL        ------->TEIL        ----------->GT1--------->GLK1(2)--------->ALFIN1   tgaacgcataagccaattcatgaacgctaaggtgaacaaatagagtgactaaaacagaatcagaaagagaaagggaggaggttaatttacagtgaaatcg  7389800          <------NtERF2         ------>NtERF2        --------->ETT(2)        --------->bZIP60(1)        <---------bZIP60(1)        <---------ETT(2)       ---------->ID1                                                                               <     --------->ALFIN1                                                                          ------     <-----------RAV1(1)                                                  --------->CCA1(2)    <-----   <---------ANAC46                                             --------->AHL20(2)--------->ANAC46  < <---------ANAC46                                          <-------TEIL  --------->ARR11(3)   ------- <---------ANAC58                                      <---------TOE2(3) <---------ARR11(3)---------- <---------ANAC58      ----------->HVH21              ---------->DOF2---------->DOF2 ---------->DOF2<   aagtcgtgtgtcgccattgagttctatgaccgaagatgatatatcgagagagagattaaagttcattaaaacaaagatatatatactcaaagccaaagat  7389900                      <---------ANAC46               <---------MYB52(1)               --------->DOF5.7(2)  ----------->GT1     <---------ANAC58          <---------PCF2 ---------ANAC46      <---------ANAC58         <---------ANAC58 --->ARR11(3) --------->TOE2(3)                <---------ANAC58 ----ARR11(3) --------->At5g28300              <------MYB46(1) ---------ANAC58    <---------AHL20(2)         <------MYB83           <----------DOF2 -->YAB1     ----------->GT1                  --------->MYB59--------->ANAC46   *TSS >DOF2  <-----------GT1                       <---------MYB46(3) <---------At4g35610------------>CBF ---------ANAC58 --------->MYB52(2)   --------->CCA1(2) --------->MYB46(3)   <------ZmHOX2a(1)   agtcgtgtaattacaccgttaattacttgggcatttacagatataagttgggtccccaacaacgcgtagcagcttttgaggacttcagcaattctccata  7390000                                                                                                   <-                                                                          --------->ANAC58         <-                                                                          --------->ANAC58         <-                                                               <---------ANAC55(2)                 --                                                               --------->ANAC55(2)                ---                                                               --------->TGA1a                    <--                                                               --------->O2               <---------AtLEC2                                                               <---------O2            <----------DOF2                                                               ===================================bZIP_DOF                                                             >>>>>>>>>>>>WRKY18      ------>ZmHOX2a(1)                 <------------CBF   ---------->ID1        ----------->HVH21       ---------->ID1  <--   ggcatagtttatctaagaaaattggggtcgaaacccttggcccttaatgaacaagaggccttgacacttgactagcacgtcttcgtcctctttcatggca  7390100                                                        <---------DAG2                                                        --------------->AGL15                                                     <-----------GT1                                                   <----------DOF2       ------->GAMYB                               <---------DAG2 --------ICU4                                ------->TEIL -------ATHB1                             <---------ANAC55(2) -----------ATHB5                         --------->ANAC55(2)  <---------TOE1(3) ------->ATHB51     <---------YAB1    <---------ANAC58  <----------DOF2 ------>ICU4     <---------MYB52(1)   <---------ANAC58  <---------------AGL15  <----------DOF2 -------ATHB12  <----------DOF2  <----------DOF2<-----------GT1<---------TOE2(3)                  <-- -------ATHB51<---------ANAC46<---------AHL20(2)<---------AHL20(2)          <---------YAB1<----------DOF2   ataattcaaccaagttgcctttatttttgtattttcttttgcctacgtatttactttactttattgaggtttatagttatgcttttagtatgcttttttt  7390200                                        ----------->GT1                                       ----------->GT1                               <---------YAB1                              --------->ZAT6                             --------->YAB1                              <-----------GT1   <---------WOX13(1)        --------->MYB46(3)   <---------ICU4--------->AHL20(2)          <---------WOX13(1)--------->ATHB12       --------->SPL7       <---------ATHB12                         --------->ATHB12   <---------YAB1 <----------DOF2          --------->WOX13(1)                        <---------YAB1  <---------DAG2<-- ---------GT1---------->DOF2--------->ICU4 <---------AHL20(2)    <---------AHL20(2) <----------DOF2   tttctttcgaacgactaaagtcttcttgcaatcatgttagaatgtttaaatggtgatcagtatcgaatttatgattaacactagtactttttgattggat  7390300                                                                              <----------DOF2                                                                        --------->MYB52(1)                                                                <---------AHL20(2)                 <---------ANAC58                               --------->AHL20(2)                 <---------ANAC46                              --------->AHL20(2)                 <---------ANAC58                              --------->AHL20(1)            --------              <----------DOF2                     <---------ANAC46  <-----------GT1          --------       --------->GLK1(1)                         <---------TOE2(3)  <---------ICU4      <---------ZAT18       <---------GLK1(1)             <---------YAB1            <---------AHL20(1)       --------->ZAT18 -------YAB1------>ZmHOX2a(1)--------->ZAT6  <----------DOF2   <---------AHL20(2)    <---------LBD16   gtgattgtgaattcctctttcgtagaaactgactctactactattgtcttttacgtagagactaatttaataactatcgactttaattcgggcacaagaa  7390400                                                 <----------DOF2                                                <---------DAG2                                      --------->AtMYB61                                      ------->GAMYB                                          ========                                     --------->MYB46(3)                              <-----------GT1  ------->TEIL                     --------->WOX13(1)                           <---------MYB46(3) ->ANAC58                         <---------WRKY38(1)                        <----------DOF2 ------>ZmHOX2a(1) ->ANAC58    <---------AHL20(2)   <---------WRKY12              <-----------GT1 ----------->GT1   aatgtatttgggaaattaatgggaagagagtcagagtcaaccaaaacataccttttgaagactattttgccaattttgtctttggttaaacggtcctgtt  7390500  Previous    Next  AGI:  At3g21080.1    Description:  ABC transporter-related. similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G21090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16797.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77224.1) Range:  from: 7388373    to: 7389980    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version