Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->MYB111(2)                      --------->MYB55(2)                      --------->MYB46(2)                                                <------------                      --------->MYB52(2)                  --------->YAB1               ==============                      --------->MYB111(1)          --------->ARR14(2)                  --------------                      <---------MYB46(3)         <---------ANAC58                   --------->GLK1(1)        <---------WOX13(1)      <---------AHL20(2) <---------ARR14(2)           <---------TOE1(3)    --------->At5g28300<-------GAMYB             <---------ANAC58               <---------TOE2(3)----   <----------DOF2  <--------P<----------DOF2 --------->ALFIN1     <----------DOF2<------ZmHOX2a(1) -------DOF2        <---------MYB52(1)<---------ANAC46 <----------DOF2     <---------ZAT6    --------   tttcgctgtaattgatatttgggttagttgggctttaattttgtgtaagtggggttcctttcacaattcctttaagagagttaaggatgtccaaaaaaag  7363500                                                                                    <-----------GT1                             --------->AHL20(2)                                  --------->AHL20(1)                             <---------AHL20(2)     <-----------GT1              --------->ARR11(3)                         --------->AHL20(2)        <---------GLK1(1)             <---------ARR11(3)     <-----------GT1    <---------AHL20(1) <---------AHL20(2)                   --------->AHL20(2) -- ---AGL15               <---------AHL20(2)--------->AHL20(2)                  --------->AHL20(2) ---- ================================================================================MADS_MADS  <-------- --->AGL3               --------->AHL20(1)--------->AHL20(1)            ----------->GT1     --------- ------->GT1         --------->AHL20(2)   <---------AHL20(1)     ==================================== -->DOF2          <----------DOF2         <---------AHL20(2)     --------------->AGL15 <----------DOF2   agaaaatttacaagtttagcctttaaaatatttatatactgaaataaaattgaatttccctccaaaacattttttagtaaaaatatatactttgccatct  7363600            <---------ARR11(3)           <---------CCA1(2)          <---------ARR11(3)          <---------AHL20(1)          <---------AHL20(2)          --------->ARR11(3)          --------->AHL20(1)       --------->AHL20(2)      <---------AHL20(2)      --------->AHL20(2)                                                                       ------     --------->AHL20(2)                                                                      ------>MYB46(1)     <---------AHL20(2)               --------->ANAC58                                       ------>MYB83 --------->AHL20(2)                   --------->ANAC58                --------->ANAC46       -------- --------->GT1                        --------->ANAC46                --------->ANAC55(2)   --------- ------>DOF2--------->ARR11(3)    --------->YAB1       --------->YAB1 --------->ANAC58     ------->GAMYB -------AGL15                --------->AHL20(2)       <---------ATHB12--------->ANAC58    --------->MYB46(3) ------>AGL15          --------->ANAC58    <---------ANAC55(2)     --------->TOE1(2) --------->TOE1(3) =======MADS_MADS      --------->ANAC58    --------->ANAC55(2)   <---------ICU4      --------->TOE2(3)   aaagtaaattaatatatcttatatcaagacataaaatcacaagtcacttaatagaaatcataagaaatacttacgaaatattagaagccttaaccaacaa  7363700                ------------>CBF                --------->LBD16                                       <---------AHL20(2)        <-------GAMYB                                                --------->AHL20(2)            --       ----------->GT1                                               <---------AHL20(1)    <---------At4g35610   --------->ARR14(2)                                                --------->AHL20(1)  --------->MYB46(3)   <---------ARR14(2)                                      ------>MYB83   <---------AHL20(2)       <-   --------->KAN4(2)    --------->TOE2(3)                  ------>MYB46(1)--------->AHL20(2)       <-  <----------TaMYB80 --------->AHL20(2)                    --------->ANAC58             ------->TEIL --->YAB1 <----------TaMYB80                               --------->ANAC58 <-----------GT1--------->At4g35610 ---->CBF<---------MYB52(1)---------->DOF2       --------->ANAC58    <---------AHL20(2)--------->ARR14(2) -->RAV1(1)--------->KAN4(2)<-----------GT1      --------->ANAC58 --------->YAB1   ----------->RAV1(2)   tagtatattcggttattccccaattacattaaaccgaatcaaatgtagaagaagcaaaaccaagcctaaaataaaatttatcagtccctgaaccgctgat  7363800                          <---------TOE2(3)                    --------->AHL20(2)                    <---------AHL20(2)        --------------->AGL15                                                  ---------->DOF2        <---------------AGL15                                              --------->LBD16       ------------>CBF <---------AHL20(2)                               --------->HSFB2a(2)       <-----------------AGL2                                            <---------LBD16       <-----------------AG                                              <---------HSFB2a(2)       <-----------------AGL1                                            <-----------RAV1(2)       ----------------->AGL3 <-----------GT1                      <---------DAG2       ---------->DOF2       ----------------->AG   ------->TEIL                      ===================HOX2a_HOX2a    --------->GLK1(1)   --------->AHL20(2)                      ------>ZmHOX2a(2)  ----------->GT1 --------->GT1  ----------->GT1             ---------->DOF2 <---------ZAT6--------->LBD16   --------- -----MYB83    <---------TOE1(3)     <---------AHL20(2)   --------->MYB52(2)<------ZmHOX2a(1) ------- -----MYB46(1) <---------TOE2(3)   ----------->TBP      <--------P <----------DOF2 <----------ID1  --   ttggtgatttccaatttagggtttaattaatgtaactatataaacagaaagtatttgggttagtgatcgctttctccaggagaaagagaaaaaagaaagt  7363900                                                  <-------GAMYB                                              --------->DEAR3(1)                                         --------->ANAC46                                         --------->ANAC58                                      <---------ARR14(2)                                      --------->KAN4(2)                                      --------->ARR14(2)                                <------NtERF2 <---------DEAR3(1)                               ------>NtERF2<---------ATERF1(1)                              --------->DEAR3(1) <---------DEAR3(1)                             --------->ATERF1(1) <---------ANAC46                             <------NtERF2 --------->ANAC46                            ------>NtERF2--------->ANAC55(2)                            <---------ATERF1(1)------>NtERF2                           --------->ETT(2)----------->HVH21                     <---------ARR14(2)  --------->ANAC58                     <---------MYB52(1)--------->CCA1(2)                  <---------TOE2(3)  <----------TaMYB80                  <---------TOE1(3) <---------ARR14(2)                  <---------ANAC46  --------->ARR14(2)                                           <---                 <---------At5g28300----------->ARR10                                        --------               --------->ARR14(2)   <---------KAN4(2)                                        --------               <---------ARR14(2)   ---------->TaMYB80                                       --------    --------->GLK1(2)--------->ARR14(2)<-----------GT1                                       --------   <---------GLK1(2)<-------GAMYB   <-----------ARR10        <---------ATHB12             =========== ->DOF2   ------------>AtMYB77<---------DEAR3(1)<------NtERF2<------ZmHOX2a(2)            <------ZmHOX2a(2) ---->GT1----------->HVH21 ----------->HVH21--------->MYB52(1)              <---------GLK1(1)<------- -------->DOF2<-------GAMYB<---------DEAR3(1)--------->ATERF1(1)    >>>>>>>>>>WRKY63  <------NtERF2   ttaaagaatctctgacagttacggttatggcgacggcgaatatacgcgacggcgttgtttccgatcaatttgactatgaaatctgggctccgatcacgaa  7364000                                                                                ----------->HVH21                                                                                --------->DEAR3(1)                                                                                <---------DEAR3(1)                                                                               <------NtERF2                                                                 --------->ARR14(2)                                                       <-------TEIL            --------->ATERF1(1)                                                       ------>ZmHOX2a(2)       --------->RAP2.3(1)                                                     <---------ARR14(2)       <---------RAP2.3(1)                                                     <---------ARR11(3)      <---------DEAR3(1)                                                --------->LBD16  <---------ARR14(2)  --------->ZAT6                              <---------LBD16    --------->GLK1(2) ------ARR11(3)                            --------->GLK1(1)   --------->HSFC1(2)------>NtERF2 ->ANAC46                        <---------ANAC46    --------->ARR14(2)     <---------At4g35610 ->ANAC58           <----------DOF2        <---------GLK1(1)   --------->HSFB2a(1)<------NtERF2 ->ANAC58        <------ZmHOX2a(1)   <---------DOF5.7(2)  <---------------------WRI1              <-- ->ANAC55(2)   --------->ANAC58  <---------ANAC58   <------ZmHOX2a(1)       --------->At4g35610   --- =======================HOX2a_HOX2a--------->DOF5.7(2)<------ZmHOX2a(2)<---------ZAT6         ------- --ANAC55(2)   --------->ANAC58  <---------ANAC58 <---------TOE1(2)  --------->LBD16      -------->P   atctacactaatcgagcaaggactttgggatgttgtcgtgaacggagtcccgcaggatccatcgaagaatccagagttagcggcgacgattcaacccgaa  7364100                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                                --------->AGP1                  <---------LBD16                                                --------->ARR14(2)     --------->GLK1(2)                                                <---------ARR14(3)    --------->ARR14(2)                                                --------->ARR11(3)    <---------GLK1(2)                                --------->ANAC58<---------ARR11(3)    <---------ARR14(2)                                --------->ANAC58--------->ARR14(3) --------->ANAC55(2)                           ---------->DOF2      <---------AGP1     --------->ANAC58 <----------DOF2    <---------ANAC58           <---------CCA1(2)   --------->ANAC58 -------ARR11(3)    <---------ANAC46       <-----------HVH21       <---------ANAC55(2)            <-- ------>ARR11(3)    <---------ANAC58 --------->DAG2               <---------LBD16               <---- -->LBD16       --------->ARR11(3)  ---------->DOF2             ----------->HVH21  <------ZmHOX2a(1)   gagctttcgaaatggagagatttcgtggtgaaagacgctaaagcgcttcagatcttgcaatcttctctcacggattctgttttcaggaagactctctctg  7364200                                              --------->ANAC58                                      --------->MYB52(1)                                      <---------DOF5.7(2)                                   ----------->GT1                       --------->MYB52(1)                                  --------->DAG2                       <---------MYB52(2)                                 --------->DAG2         <---------ANAC55(2)                                ---------->DOF2         --------->ANAC55(2)                          <---------ANAC58    --------->ANAC46        --------->ANAC58                      <---------GLK1(1)       --------->ANAC58        --------->ANAC46                      --------->GLK1(1)  ------->GAMYB  <---------ANAC46 <-----------GT1            <---------ARR11(3)--------->HSFB2a(2)      <-------TEIL   --------->ANAC58            --------->ARR11(3)<---------HSFB2a(2)--------->MYB52(1)   --------->ANAC55(1)          --        ---------->DOF2   <---------ANAC58  ---------->DOF2           <---------ANAC55(2)       ----- --------DOF2        <---------ARR14(2) <---------MYB52(2)            --------->ANAC55(2)    -------- -----At4g35610      --------->ARR14(2) --------->MYB46(3) <---------TOE2(2)   <-------TEIL  --------   cttcttcggctaaagatgtttgggatttgcttcgaaaaggtaacgaacaagcaacgatacgtagattagaacaagtaacgatacgtcgattagagaagca  7364300       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     <---------ARR14(3)     <---------AGP1                     ------>ZmHOX2a(1)     --------->ARR14(3)             --------->ARR14(2)     --------->ARR11(3)             <---------ARR14(2)                                <---------ARR14(2)     <---------ARR14(2)    --------->ARR14(2)                                   <---------SPL7     --------->ARR14(2)    --------->GLK1(2)                                   <---------ANAC46     <---------ARR11(3)    <---------ARR14(2)                   --------->TOE2(3) --------->SPL7 ------->YAB1             <---------GLK1(2)                  <---------ARR14(2)<---------ANAC58 ---->WOX13(1)        ---------->DOF2 ----------------->AGL1<---------GLK1(1)  <---------ANAC58------ ->ANAC58        <---------WOX13(1)<---------At4g35610      --------->GLK1(1) <---------DEAR3(1)   <- ->ANAC58      --------->ATHB12   <---------MYB46(3)  <----------DOF2  --------->ATHB12        <-----   attagaagatctcaaaatggttgacaaagaatctggcagttcctacttggataaggctttggaaatccttgaacgattgggccgtgcgaaacttgagaaa  7364400  Previous    Next  AGI:  At3g21000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G20980.1); similar to putative polyprotein [Oryza sativa (japonica cultivar-group)] (GB:AAP46257.1); contains domain PTHR11439 (PTHR11439) Range:  from: 7363927    to: 7365144    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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