Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------bZIP60(2)                              <---------O2                              ===============================MYC_MYB                              <---------ANAC46                ---------->ID1             <----------ID1   <---------TGA1a              --------------->AtSPL8         ===============================bZIP_DOF          <------------CBF         ---------->DOF2    --------->ZAT14            <---------TOE1(2)   <---------WOX13(1)       <---------ZAT14          <-------GAMYB             <----------DOF2  <------------CBF     <------------CBF             ------>ZmHOX2a(2)       --------->GLK1(2) <---------ICU4   ----------->GT1                   <---------MYB46(3)   ------------>CBF --------->ATHB12 --------->ANAC58<------MYB83     <------ZmHOX2a(2)    <-----------GT1       ------- ---------YAB1    --------->ANAC58<------MYB46(1) <---------ARR11(3)    --------->ANAC46      ------- -------->ICU4--------->CCA1(2) --------->ALFIN1  --------->ARR11(3)  <-----------GT1     <----------   tgatgattgcagaaagagacaagaaaattgtgaagtgggtcttaataactaagatcgttggattgtcccattttacacaatctttttcgacatgtcaagc  7347800                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                     <---------CCA1(2)                                                                 ------>ZmHOX2a(1) <---------ANAC55(2) ------>ZmHOX2a(1)                                        --------->ANAC46         --------->ANAC55(2) -->ANAC58                                               --------->MYB46(3)   ----------->GT1 -->ANAC58                                           --------->ZAT14 --------->AHL20(2) -HVH21                   <---------ALFIN1         --------->ZAT14   <---------AHL20(2)      <-------   ttcctcttctcaatctcatcacacatcccctcttcttgcctaaatactctcactgttcacccgcttcctcataaattgactcgttacatatctatatacc  7347900                --------->MYB46(3)               -------->P       --------->ALFIN1      <-------GAMYB     <------MYB46(1)     <------MYB83     <---------DEAR3(2)    <---------DEAR4(1)    <---------DREB2C(2)    <---------DEAR3(1)    --------->MYB111(2)    --------->MYB46(2)    <---------MYB46(3)                                                                      <--------    --------->MYB55(2)               <---------TOE2(3)                                   ----------->GT1   <---------MYB55(1)                <---------TOE1(3)                                   <---------REM1(1)   <---------ORA47(1)        <---------GLK1(1)                                   <<<<<<<<<MYB98  <-----------HVH21      --------->ANAC58                                  <---------At4g35610 <---------MYB46(3)      --------->ANAC58                                  --------->At4g35610 ----GT1<---------MYB46(3)   --------->GLK1(1)                      --------->ETT(2) <------ZmHOX2a(1)   gagcggtcggtggtactaacctccaattcgcaattccctaaggtagaacaatatgcgatttcagccttggtcgagagagctaagttaggagttgtaacta  7348000                                                <------NtERF2                                              --------->ETT(1)                                --------->ARR14(1)                                <---------GLK1(1)                                --------->CCA1(2)                               --------->ARR14(2)                               --------->ARR11(1)                               <---------ARR14(2)                               --------->ARR11(3)                        <------NtERF2                     --------->ICU4          ---------->ID1              --------->At5g28300                     <---------YAB1          --------->RAP2.6(3)        ----------->GT1                 <-----------HVH21         <-----------RAV1(1)      --------->DAG2              <---------At5g28300    <----------DOF2               ---------->DOF2                 -- ---GT1      <-----------GT1   <---------ARR11(3)             <---------YAB1             <---------AHL20(2)   gtcaatgttcacaatttactgtcatgtttagtagatatgctttttttgtcggcatgtagttgatatgcttaaggcggtaaataactcttattttttggtg  7348100                                                                                                <----                                                                                                <----                                                  ---------->DOF2                              <-----                                                  <---------DOF5.7(2)                          ------                                                --------->At5g28300                         <--------                                                --------->DOF5.7(2)                         ---------                                               ------->GAMYB                                <--------                                             <---------TOE2(3)                              ---------      <------NtERF2----------->GT1          --------->MYB52(1)  ----------->TGA1          ------>NtERF2      --------->At5g28300 ---------->DOF2   <---------DOF5.7(2) ----------->HVH21      ------->GAMYB     ----------->GT1 --------->AHL20(2)<-------TEIL      <---------MYB52(1)           --------->MYB46(3) --------->DAG2   --------->DAG2   <---------TOE1(2)     --------->DOF5.7(2)        --------->MYB52(1) -------->DOF2   ---------->DOF2<---------ANAC55(2)     <-------GAMYB   ------------>CBF --------->DEAR3(1)   caaaaggcggtaaataactaaaagtaaataaaacgcgtatgttcattaacggtaacgccgttatctctgacgaaaacaatccatcccaacgacgacgtcg  7348200   *TSS                              ------>NtERF2                         --------->ANAC46 -------HVH21                       ------>NtERF2                       <---------WRKY38(1) -------TGA1                        --------->LBD16                     <---------WRKY12 ----bZIP60(1)                     --------->ANAC46                     <---------DEAR3(1)         -- --->bZIP60(1)                     --------->LBD16                 <---------WOX13(1)            <--- -bZIP60(1)                       <---------LBD16             --------->TOE2(3)                  <--- >bZIP60(1)            <----------DOF2                  --------->ANAC58<---------ETT(2)    <-------- -O2          <------------------------ANAC81           --------->ANAC58--------->ETT(2)    <-------- >O2    <------------------------ANAC81   <---------MYB52(1)  --------->TOE1(3)   ---------->DOF2<---   tcacgagcttcttctctgttttcttctttctctattcccggcccgtttagcgattagaacgaaaccctaattggtcgacgaaatgaaagggattgcgagg  7348300                                                     <---------ZAT6  <-----------GT1                        <---------HSFC1(1) --------->GT1                           --------->HSFB2a(2) ------ANAC46                            <---------HSFB2a(2) ------ANAC58          <---------AtMYB61 --------->HSFC1(1)                                <--------- -ANAC58          --------->ARR14(2)    <---------LBD16                            <---------At4g35610 -ANAC58          <---------ARR14(2)  <---------ARR14(2)                   ------>ZmHOX2a(1)        < ------ANAC58     --------->GLK1(2)   --------->ARR14(2)       <<<<<<<<<TBF1    <---------At4g35610 <   cttgtaacttctctatcgcgaatcggaggtcgcaaggtcgtttctggaacaagtactgtgacttcttcttcgtcttcctctcttctgctatctcgtcgct  7348400                                           --------->GLK1(2)                                          <---------GLK1(2)                                 --------->LBD16                                --------->ANAC46                                --------->LBD16                                --------->HSFB2a(2)                               <---------HSFB2a(2)                                                  <                       --------->ANAC55(2)--------->ARR14(2)                                        <                     <-----------GT1      <---------ARR14(2)              <---------ANAC58       ---- --HVH21   ------>NtERF2       --------->HSFB2a(2) XXXXXXXXXXXXXXXXXXXXX>MIR4221                <---- ----------DOF2      <---------AHL20(2) <---------ATHB12                  <---------ANAC58      ----- ---------DAG2------>NtERF2    <---------LBD16 <---------At4g35610    <----------DOF2           <----   cgcttttcatctctgccaccaatttacttaattcccggaccaaggattctgctcttccctcgttgaattcttctttacttgctcagaaatggaatttcct  7348500              --------->HSFB2a(2) ---------TOE2(2)                                                                         --------->ARR11(3) ---------TOE1(2)                                                                        --------->ATHB12 ----->TOE1(1)--------->HSFC1(1)                                                <---------AHL20(2) -----HSFB2a(2)    ----------->GT1                                              ---------->DOF2 ->ZmHOX2a(1) <---------HSFC1(1)           <---------ANAC58                --------->MYB46(3) -----LBD16   <---------HSFB2a(2)          <---------ANAC58     <---------CCA1(2)       <---------ATHB12   cggaggtatctatcttctagaaggtttttagttcggagttttcaggcttgaagttagaacaatcgtttatctttcgaaccattaaaacgaatgattttgg  7348600                                     <---------ANAC46                                     <---------ANAC58                                <---------AHL20(2)                           <---------TOE1(2)                           <---------TOE2(2)      <------NtERF2                         <---------ARR14(2)                         <---------LBD16   <---------AtLEC2                   <---------ATHB12                        <---------ANAC58  --------->ZAT14                --------->ANAC58                  <---------MYB59    <---------ANAC58                    --------->ANAC58   ------>ZmHOX2a(1)    <---------TOE2(3)   <---------ANAC46  <---------ZAT14         <-----------GT1       --------->ARR14(2)   --------->MYB52(1)   <---------ANAC58 --------->ALFIN1    --------->ICU4 --------->WOX13(1)   cgaattaagggtctcattagcctaattcgtgggtttaattcgtgtgcagggcagagaagaacaatgtttatccaaacccaatcaactccaaatccttctt  7348700  Previous    Next  AGI:  At3g20966.1    Description:  unknown protein Range:  from: 7347792    to: 7347941    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g20970.1    Description:  NFU4 (NFU domain protein 4). Identical to NifU-like protein 4, mitochondrial precursor (NIFU4) [Arabidopsis Thaliana] (GB:Q9LIG6); similar to NFU5 (NFU domain protein 5) [Arabidopsis thaliana] (TAIR:AT1G51390.1); similar to hypothetical protein OsI_017845 [Oryza sativa (indica cultivar-group)] (GB:EAY96612.1); contains InterPro domain NIF system FeS cluster assembly, NifU, C-terminal; (InterPro:IPR001075); contains InterPro domain NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; (InterPro:IPR014824); contains InterPro domain HIRA-interacting protein 5 (InterPro:IPR017065) Range:  from: 7348203    to: 7350311    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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