Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ANAC46                      <----------TaMYB80   ----------->RAV1(1) ----------->GT1        <---------ANAC58                     --------->ARR14(2)   <---------ETT(1) <---------ZAT14        <---------ANAC58        <---------TOE2(3)       ----------->GT1         <------MYB46(1)  <----------DOF2            <---------YAB1  <---------ARR14(2)   <----------ID1<------MYB83  <---------DAG2           --------------->AGL15       <---------TOE2(3)   <-------TEIL<---------ZAT6 ---->At4g35610    <-----------GT1        <---------ANAC46  --------->AHL20(2)<---------MYB52(1)   ataactttttgtgtggatgattttctatactattaatgttatcgccgtatattcactgaggtttaaatccgacaaaatacgttggtatagtgtaagaaaa  7300300                                    --------->YAB1                                    --------->AHL20(2)                                   <---------YAB1                                   --------->ICU4                                 <--------HAHB4                                 --------->ATHB51                                 <---------ICU4                                 --------->YAB1                       --------->AHL20(2)                                 -------->HAHB4                       <---------ICU4                                 <--------ATHB1                       <---------AHL20(2)                                <---------YAB1                        --------->ATHB51                                --------->ICU4                       --------->ICU4                                <---------ATHB51                     <---------YAB1                                --------->AHL20(2)         <---------ZAT18<---------AHL20(2)                              --------->YAB1     <---------ICU4    <---------ICU4                             <---------YAB1     --------->ICU4  --------->ANAC55(2)   --------->YAB1                           ------>ZmHOX2a(1)  --------->YAB1    --------->YAB1        --------->AHL20(2)                      <---------GLK1(1)      <---------ATHB51  <-------TEIL   <----------ID1  -------   caaattggatgctggttttagttgaactcctataataattataaacaataataatgtatagtgcatacataattatttatacaacaaataatattctaaa  7300400                                                     --------->ARR14(2)                                                     <---------ARR11(3)                                                     <-----------ARR10                                         <---------At4g35610                                         <---------CCA1(2)    <----------DOF2                               ------>ZmHOX2a(1)     --------->ARR11(3)     ---------->DOF2   ----------------------->TaNAC69(2) <-------TEIL  --------->RVE1(1)    --------->TOE2(3) --->DOF2                     --------->TOE2(3)     --------->CCA1(1)    --------->TOE1(3)    <------   ggggtctctcaccataaaacttctctggtcttcctcaagattcatctctcacaaatatcttctcctttgttaaaaccctaaagctagagtttatagcttt  7300500                                                                                           ----------                                                                                      <---------GLK1(2)                                                                                      --------->ARR14(2)                                                  --------->AHL20(2)                  <---------ARR14(2)                           ---------->DOF2    --------->CCA1(2)                    <---------ANAC55(2)                      ------------------------>ANAC81                        <---------AHL20(2)                     ---------->DOF2         --------->ARR11(3)              --------->AHL20(2)                ------------------------>ANAC81   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <-----------GT1               ---------->DOF2   ---------->DOF2  <---------AHL20(2)  ------->TEIL --------->ANAC55(2) ----DOF2 ------------------------>ANAC81    <---------ARR11(3)       -------->P  <-------TEIL <-----   tgagagaacgagaacgagaaagagaaagagaaagagaaagagagatagatatataaatctgaagaatacatctacctatataaatacatattctccaatc  7300600                         <---------YAB1                        <-----------GT1                        --------->ARR11(3)                        <---------ARR11(3)                                         ----------->GT1                   <---------AHL20(2)                                              <------MYB46(1)                   --------->AHL20(1)                                         --------->ARR11(3)                   <---------AHL20(1)                                    <---------ANAC58                   --------->AHL20(2) --------->TOE2(3)                  <---------ANAC58                  --------->AHL20(2)<---------ATHB12                 <---------WOX13(1)               <--------HAHB4      --------->ARR14(2)               <------------CBF ---------->DOF2--------->TOE2(3)<---------ALFIN1                  --------->ATHB12<------MYB83     - -->CBF        <---------ICU4   --------->LBD16          <----------DOF2 <---------ANAC46     ------- ----ATHB12   <---------YAB1    ------------>CBF  ------->TEIL    <---------YAB1 *TSS      --------->YAB1   tttgaaagcagtcttgatcattaaattatctttccccaatccttgatagttgaatcttcctttcttctctgattggcttagagcttggtatattgatcat  7300700                                                                                                  <--                                                                                          <---------GLK1(1)                       <-----------GT1                                                    <----------DOF2                   --------->ATHB12                                                      <---------ANAC58              <---------AHL20(2)                                                         <---------ANAC58              --------->AHL20(2)                                                    <---------ANAC58             <----------DOF2                 <---------GLK1(2)                      <---------ANAC46    --------->ALFIN1 <---------WOX13(1)      --------->ARR14(2)                     <---------ANAC58 --------->DOF2--------->ATHB12              <---------ARR14(2)                  ------->GAMYB   <--- -->YAB1  --------->ICU4              --------->AHL20(2)---------->DOF2      --------->MYB46(3)------   accaaagtggtagtgatttattgattaacccaaacacaaaataaacagatttgactcaaaaagaagaaaatgaattctaacaactggcttggctttcctc  7300800                                                    --------->DEAR3(1)                                                   <------NtERF2                                                   <---------At4g35610                                                   --------->At4g35610                                                 <---------WRKY38(1)       --------->MYB46(3)                        <---------WRKY12                          --------->ARR11(3)     ------>MYB83                                <---------WRKY45                          <---------ARR11(3)     ------>MYB46(1)                           <-----------HVH21                          <---------CCA1(2)   --------->MYB46(3)                         <------MYB46(1)                            <---------ARR11(3)   --------->DEAR3(1)                         <------MYB83                               <---------AHL20(1)  --------->ANAC46          <---------YAB1 <---------ANAC46                              --------->AHL20(1) ---------HVH21          ------>ZmHOX2a(1) <---------ANAC58                              --------->ARR11(3) -------DOF2          ------>NtERF2        <---------ANAC58                        ----------->GT1 >ZmHOX2a(1)    <----------DOF2       --------->TOE2(3)               <----------DOF2    <---------AHL20(2)   tttcaccgaacaactcttctttgcctcctcatgaatacaaccttggcttggtcagcgaccatatggacaacccttttcaaacacaaggtaatatatctat  7300900                                  ---------->DOF2                                --------->ANAC46                                          <------ZmHOX2a(1)                                --------->ANAC58                                      <---------MYB46(3)                          <---------AHL20(2)                                    <---------ALFIN1                          --------->AHL20(2)                                   <---------REM1(2)                          --------->YAB1                                    <<<<<<<<<GATA-4                         <---------YAB1                                     <<<<<<<<<GATA-2                       --------->YAB1                                       <<<<<<<<<GATA-1      <---            <----------DOF2     --------->ANAC58                          --------->WOX13(1)   ------ --------->ARR14(2)   <---------YAB1 --------->YAB1         <---------ANAC46<<<<<<<<<GATA-3  <------ZmHOX2a(1) <---------ARR14(2)   <---------AHL20(2)       ----------->GT1       <---------YAB1  --------->ALFIN1   acatatatgcttctctttttctgtataattatatacgaaagataacaatttgttaatttgtagagtggaatatgatcaatccacacggtggaggaggaga  7301000                          <---------GLK1(2)                       <---------MYB111(2)                          --------->ARR14(2)               --------->WOX13(1)                 --------->DAG2                           --------->AtMYB61                ---------->DOF2                    --------->ANAC58------->GAMYB             ----------------->AGL3                --------->ANAC58<---------ALFIN1             <-----------------AGL1               --------->SPL7  --------->MYB46(3)             ----------------->AGL1             --------->LBD16   <---------MYB55(2)             ----------------->AGL2             <---------SPL7   ------>MYB83           <---------ARR14(2)                --------->MYB52(1)  ------>MYB46(1)     <------ZmHOX2a(1)    <---------ARR14(2)--------->MYB52(1)   -------->P         --------->MYB46(3)  <------ZmHOX2a(1) --------->ALFIN1     <---------At4g35610------>MYB46(1)  <---------ANAC58 ------REM1(1)<---------HSFB2a(2)        --------->At4g35610------>MYB83     <---------ANAC58 --->At4g35610--------->HSFB2a(2)   --------->ALFIN1    >>>>>>>>>MYB2       --------->At4g35610   tgaaggaggagaggttccaaaagtggccgattttctcggtgtgagcaaaccggacgaaaaccaatccaaccacctagtagcttacaacgactcagactac  7301100                                                       <---------ANAC58                                                       <---------ANAC58                                                       <---------ANAC46                                  --------->YAB1      --------->ZAT2                      --------->YAB1                          <---------ANAC58     <---------REM1(1)                         <---------ATHB12                          <---------ANAC58   <-------GAMYB                    ----------->RAV1(1)              <---------ANAC58   <---------ATHB12     <---------ZAT2         --------->MYB46(3)              <---------ANAC58 --------->WOX13(1)  <---------At4g35610    ------>ZmHOX2a(1)    ------   tacttccataccaatagcttgatgcctagcgtccaatcaaacgatgtcgttgtagcagcttgtgactccaatactcctaacaacagtagctatcatgagc  7301200  Previous    Next  AGI:  At3g20840.1    Description:  PLT1 (PLETHORA 1); transcription factor. Identical to AP2-like ethylene-responsive transcription factor PLETHORA 1 (PLT1) [Arabidopsis Thaliana] (GB:Q5YGP8;GB:Q6PQQ6;GB:Q9LT37); similar to PLT2 (PLETHORA 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21939.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74963.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 7300681    to: 7303699    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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