Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------------AGL15                        <---------AHL20(2)                                  --------------->AGL15                    --------->AHL20(2)                                 ----------------->AGL2                    <---------AHL20(2)                                 ----------------->AGL3                  --------->AHL20(2)                                --------->AtLEC2                        --------->ARR11(3)                             <-------TEIL                               <---------ARR11(3) ---------->RAV1(1)      --------->MYB59                                <---------AHL20(1) ------->ANAC46          <---------TOE2(3)                          <------ZmHOX2a(1) ----->ANAC46            <---------TOE1(3)     --------->ARR11(3) <---------TOE2(3)       <----------ID1   cacaacataagaactaagaacagtttttaggttcatccaaaataagaaacatctactagtttaagacttaggaatatatatataaacgaattgggacaag  7258500                                     <---------TOE2(3)                     <---------ARR14(2)-------->HAHB4                     --------->ARR14(2)--------->YAB1                                   --------->At4g35610             <-----------RAV1(1)    --------->YAB1                               <----------DOF2         <----------DOF2          <---------YAB1                          --------->ANAC58        <---------DAG2        --------->TOE2(3)                           --------->ANAC58     <-----------GT1 <---------GLK1(2)<---------YAB1             <---------DAG2--------->ICU4   tttacatttacctttctggtgcaaattctcaacctcattaatgatactgttgaacttgttagaatcaatttttgtcaagtcatctttagcatctgtacca  7258600                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              -------                                                                                       <---------ARR11(3)                                                                                       --------->ARR14(2)            ----------->GT1                                                            <---------ARR14(2)        <------MYB83                   --------->DAG2                    <---------ANAC46    --------        <------MYB46(1)               ---------->DOF2                ------>ZmHOX2a(2) --------->ARR11(3)       --------->MYB46(2)          --------->TOE2(3)               --------->ARR11(3)  <---------GLK1(2)       --------->MYB59             --------->TOE1(3)               <---------ARR11(3)--------->ANAC58  --------->DAG2       --------->TOE2(3)                      --------->TOE2(3)      --------->ANAC58 ---------->DOF2       --------->TOE1(3)                   <-----------GT1           ----------->ARR10   aaaaaaagttaggtcagaaaaaaaaccctaaaaaaaaccctaaagtagaagaaatagaatgtaacctttgatcttgtgggtaagagcaagatactgagat  7258700                                                    <-------GAMYB                                                   <---------MYB46(3)                                                   --------->MYB55(2)                                                   --------->MYB52(2)                                                   --------->MYB111(2)                                                  <--------P                                                  <---------MYB55(1)                                                 <-------GAMYB                                                --------->MYB55(2)                                                <---------DEAR3(2)                                                <---------MYB46(3)                                             ------------>AtMYB77 -->ZmHOX2a(2)                            <---------ARR14(2) --ZmHOX2a(2)                    <<<<<<<<<TBF1 <---------DEAR3(1)          <---------At5g28300 ----ARR11(3)         <---------ANAC46    --------->ARR14(2)        --------->ANAC58               <- --->AGP1             <---------ANAC58 ------>ZmHOX2a(1)     <---------RAP2.6(3)                ----- --->ARR11(3)         <---------ANAC58 --------->LBD16      --------->RAP2.6(2)  -------------------- -->GLK1(1) ==================================HOX2a_HOX2a ------>NtERF2--------->WOX13(1)       ===== --->ARR10  <------ZmHOX2a(2) <<<<<<<<<TBF1 <---------DEAR3(1)      --------->ANAC58            =====   cttatagctctccgatcagcaattccttgttcttcttcttcctgaatcggcggttgttgaggccgtaatgaagcaattacggtcttactacgcttctcct  7258800                                                          ----------->GT1                    --------->LBD16                       --------->LBD16           <---------ANAC58                             <---------LBD16           <---------ANAC58                           ------>ZmHOX2a(2)        <----------DOF2                              <---------GLK1(1)       =======================HOX2a_HOX2a            <------ZmHOX2a(2)      ========================HOX2a_HOX2a     --------->At4g35610      <------ZmHOX2a(2)                       --------->ZAT2     --------->ARR11(3)=====================================HOX2a_HOX2a                         -----     <---------ARR11(3)<------ZmHOX2a(1)      <---------At4g35610    <---------MYB52(1)         <---- <-----------GT1    --------->HSFB2a(2)       <---------ZAT2<---------MYB52(1)                ------- ---------DOF2      <---------HSFB2a(2)      ------>ZmHOX2a(1)     <---------ANAC58          -------- ->ZmHOX2a(1)      --------------------->WRI1================HOX2a_HOX2a                     <------- ->WRI1------>ZmHOX2a(2)                     ===============HOX2a_HOX2a         <---------At5g28300 =============HOX2a_HOX2a                  ----------->RAV1(2)     <---------ANAC58        --------->YAB1 ============HOX2a_HOX2a         <---------GLK1(2)   --------->GLK1(1)         <-----------GT1<------   tctttacgatctttggtgtctccgaggactcatcggcttctcttctcctgctgcgatctccggttaattccgtttcccatttcaccgagtttctcatgat  7258900                                                                                    <---------ANAC46                                                                                   --------->ATERF1(1)                                                                                   <------NtERF2                                                                                  <---------DEAR4(2)                                                                                  <---------ERF1                                                                                  <---------RAP2.3(1)                                                                                  <---------ATERF1(1)                                                                                  ------>NtERF2                                                                                 <---------ANAC46                                                                                 <---------DEAR3(1)                                                                                 <---------RRTF1(3)                                                                                 <---------RAP2.3(3)                                                                                 --------->DEAR3(1)                                     ----------->GT1                             <---------RAP2.3(2)                              <----------ID1                                   <---------RAP2.3(1)                             ----------->GT1                     ---------->DOF2<---------ABI4(1)                           ---------->DOF2                       ==================================== ---->ICU4              --------->ANAC58                   --------->YAB1      ====================== -----YAB1              --------->ANAC58                 --------->AHL20(2)    ------->GAMYB -->YAB1              --------->CCA1(2)                  <---------AHL20(2) --------->MYB52(1)      < ->ICU4        <---------At4g35610  --------->DAG2      --------->YAB1     ----------->HVH21        - --YAB1        --------->At4g35610 --------->DAG2      ----------->TBP   --------->TOE2(3)          < ---ICU4       ----------->RAV1(2)---------->DOF2      <---------YAB1    --------->TOE1(3)          -   gattttagaaaaaaatcatctgagagacggaaaggaaaaaggtgaaacgaagagattataaaaataagaaagaaaccctaacggcggcgagaagacgaag  7259000                ------>NtERF2                --------->LBD16                   <---------ANAC46               --------->ANAC46              <------------CBF               <<<<<<<<<<E2Fa               <---------AHL20(2)                                   >>>>           <-----------GT1                  --------->ATHB12                                    <----       --------->AHL20(2)                  <---------YAB1                                      ------ =========bZIP_DOF ------>NtERF2          <-----------TBP                             <------MYB46(1) =========MYC_MYB --------->DEAR3(1)    <---------AHL20(2)                            <------MYB83  < ---------O2  <---------LBD16          <---------AHL20(1)                       --------->ICU4 ------ -------->TGA1a--------->ANAC58        --------->AHL20(1)           <----------DOF2  <---------TOE2(3) ---------TGA1a--------->ANAC58        <---------ARR11(3)           <---------DAG2   --------->MYB59- -------->O2 >>>>>>>>>>E2Fb           ----------->TBP   <---------AHL20(2)    ---------->DOF2<-------GAMYB   agacgtcgataaatttcccgccaacgtcgaagtctctgctatatatttattggagtatattttttgttgacttttttgcctaaagattaggtttcggttg  7259100                                                                <------MYB83       --------->ZAT14                                          <------MYB46(1)       <---------ZAT14                                         <---------MYB46(3)    ------>ZmHOX2a(1)                                         <--------P  --------->YAB1    --------->At4g35610                                     <---------MYB46(3) >>>>>WRKY6    <---------ICU4                    --------->At4g35610     <-------TEIL -----WRKY18(1)<---------AHL20(2)                <---------At4g35610  --------->ATHB12         ------ --->WRKY12   <---------ATHB12                  <-----------RAV1(1)  --------->ICU4         <-------- ---------ARR14(2)             =============================RAV<---------AtMYB61<---------ARR11(3) --->WRKY38(1)--------->AHL20(2)   <----------CDC5          --------->ATHB12    --------->ARR11(3) -------->ARR14(2)             <-----------RAV1(2)    <----------DOF2<---------YAB1 <-----------GT1   actatcctctgaactaataaatacttggttaactcaggctgagctatgttctgctgctctaatggttggtcatgattcatgagattttacttcccttggg  7259200                               --------->TOE2(3)         <---------YAB1       ------>ZmHOX2a(2)       --------->YAB1        <------ZmHOX2a(2)                                    --------->ANAC58      <---------ATHB51      <---------ARR14(2)          <-----------HVH21         --------->ANAC58      --------->ICU4        --------->ARR14(2)         <---------ANAC58         <---------ANAC58   <---------YAB1       ------->MYC3                   <---------ANAC58         <---------ANAC58 <-----------GT1        <-------MYC3                   <---------ANAC46      --------->ALFIN1 --------->YAB1 --------->ANAC46                 --------->DAG2          <---------ANAC46 ----->GT1      --------->ANAC58                ---------->DOF2          <---------ANAC58 -MYB52(1)      --------->ANAC58           <---------ANAC46              <---------ANAC58   taattacaattatgtttcaaggaacatgtggatccttgataccctgtgtgaaaagttgcgtcaaggtccaagtttgcgagtggctcgctatttcatagtt  7259300                                                                                                   <-                           <---------ANAC58                                                      ----                           <---------ANAC58                                                     <----                           <---------ANAC55(2)                                                 ------                           <---------ANAC55(1)                --------->ALFIN1                 <-----                    --------->ICU4       <---------------------WRI1                           -------             <---------AtLEC2     ---------->DOF2      <---------LBD16                        <------       <---------WOX13(1)  --------->ANAC55(2)    <------ZmHOX2a(2)      --------->ANAC58     -------     --------->ATHB12--------->ATHB12<XXXXXXXXXXXXXXXXXXXXXMIR831 ----------->HVH21           <------    <---------AHL20(2)     <---------ANAC46      <---------ARR11(3)      --------->ANAC58    --------    --------->AHL20(2)   <-----------GT1--------->ALFIN1 --------->LBD16 --------->ANAC46  --------->ALFIN1   gtgagattaattgatgcatgaaatgatttacgtgtttaaagggtgcgaagagatcaaaccggaagtgtttgacacaagacacaaactttggaagtggcgc  7259400  Previous    Next  AGI:  At3g20760.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23385.1); contains InterPro domain Nse4 (InterPro:IPR014854) Range:  from: 7257193    to: 7258897    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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