Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ARR11(3)                                              --------->ARR11(3)      ----------->HVH21   --------->ARR14(2)              --------->LBD16                 <---------ARR11(3)     <---------WOX13(1)   <---------ARR14(2)          <---------ARR14(2)           ---------->DOF2    <-------GAMYB         --------->ARR11(3)          --------->ARR14(2)         --------->ANAC58   <---------MYB46(3)    <------ZmHOX2a(1)           <---------CCA1(2)           --------->ANAC58  <---------TOE2(3)   ====================RAV      <---------ANAC58              --------->ANAC46  <---------YAB1      <-----------RAV1(2)    --------->ARR14(2)              <---------ALFIN1 ---->GT1      ---------->DOF2               <---------ARR14(2)             --------->MYB46(3) --TOE1(3) --------->ANAC58          -------->P    <---------ANAC58         --------->HSFC1(2)   <--- --TOE2(3) --------->ANAC58   <-----------RAV1(1) ---------->ID1      <-----------HVH21   <---------ARR14(3)   tattttggttgacaccgaaaagcctcaggattttgtggctaccgctggatttgtcgtatccgagagcatacctgtcgaagcacccgaaaggaggtcttgg  7238600                                                              --------->AHL20(2)                                                       --------->SPL7                                                     <---------SPL7                                                   --------------->AtSPL3             <---------ANAC58                        <---------ANAC55(2)        --------->HSFB2a(2)            <---------WOX13(1)                     --------->ARR14(2) --------->ANAC58--------->ANAC58      --------->At5g28300      <---------MYB52(1)--------->ANAC55(2)      <-----------GT1           <---------ZAT14  <--------   ------>ZmHOX2a(2) <---------ARR14(2) --------->ANAC58--------->ANAC58   --------->ZAT14  --------- ------AtLEC2  ---------->ID1<-------TEIL       <-----------GT1         <-------GAMYB <---------ANAC58   catgatccgttttgtttgtccccaatacgggttcaaaaccacaagcattttttcccgtacgcataaaaatacaccgttgcagtgaatgacttgagatttt  7238700                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             --------                                                                                             <------NtERF2                                                                                             --------                                                                                             --------       --------->YAB1                 --------->TOE2(3)    ---------->DOF2                  <--------   <---------AHL20(2)  <---------At4g35610 --------->At4g35610                              <-------- -ARR11(3)             --------->At4g35610 <---------At4g35610  <-----------RAV1(1)         ------>NtERF2 >ARR11(3) <----------DOF2            --------->TOE1(3)  <------ZmHOX2a(2)             <---------WOX13(1)   tggaataaatcatcttttttgtctctgctaacaattttagccttaagctgaatagatagatcaaagctgttgttctgacttctatggagattgacgccga  7238800          --------->AHL20(1)          --------->AHL20(2)          <---------AHL20(2)       --------->TOE2(3) --->ORA47(1) >NtERF2 --------->AHL20(2) ----ATERF1(1) -->DEAR3(1) ---ETT(1)<---------AHL20(1)<---------GLK1(2) -->DEAR4(1)            --------->At4g35610 ->RAP2.3(1)          --------->YAB1                                                                < ->ORA47(2)          --------->ICU4                    <----------DOF2                            --- ->ATERF1(1)         <---------YAB1        ----------->HVH21                                      <-- ->DEAR3(2)     <---------ANAC58         <---------LBD16                    ---------->DOF2       --- -ATERF1(1)     <---------ANAC46         ----------->RAV1(2)        <---------YAB1    <----------DOF2 -RAP2.3(1)     <---------ANAC58  <----------DOF2 <---------At4g35610    --------->ANAC46  <---------YAB1   cccaaaaaacattaaattgtgtgatcatcagaaactctttttcccctgataccgctgctttgtcgatgttcttattcgcaaagctccgattttttgataa  7238900                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)             <---------AtLEC2                                             ------>MYB83        <---------ICU4                                                    ------>MYB46(1)       <---------DAG2                                                   <---------MYB111(1)    <---------------AGL15                                               --------->AtMYB61    <-------    --------------->AGL15                       <---------ARR14(2)     --------->ANAC46      --------   ----------------->AGL2                       --------->ARR14(2) ------>ZmHOX2a(1)      -----------   ----------------->AG                      --------->ANAC58     --------->ANAC46      --------->CCA1(2)   ----------------->AGL1           <---------MYB52(1)       <---------ARR14(2)        --------->ARR11(3)   <-----------------AGL1         <---------TOE1(2)          <-----------ARR10         <---------ARR11(3)   ----------------->AGL3         <---------TOE2(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->ARR14(2) ---------SPL7                   <-----------RAV1(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------ARR14(2) ------------>AtSPL3  ------>ZmHOX2a(2)      --------->ANAC46--------->GLK1(2)        <---------HSFB2a(1) -------------AtSPL8--------->ARR11(3)       --------->ANAC58--------->ARR14(2)------>ZmHOX2a(1)----- ------------>AtSPL8<---------ARR11(3)   <---------AHL20(2) <---------GLK1(2)  --------------------->WRI1   atcgtaccaatttttgcaagtagatcgtattgctctcaggtatttaaacggaaccctagagagaatctcctccaccaaatcctttggaagatttgacatc  7239000                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                     <---------AHL20(2)                           ---                                                    --------->AHL20(1)                            <--                                                    <---------ARR11(3)                           <---                                                    --------->ARR11(3)                          <----                                                    <---------AHL20(1)                         <----- --bZIP60(1)                            <---------REM1(1)        --------->ICU4               <------ ->bZIP60(1)                  <---------WOX13(1)   --------->CCA1(2)                          <------ >HVH21---------->ID1        <------------CBF     --------->ARR11(3)                      <---------- ---->YAB1                  --------->ATHB12      <---------ARR11(3)                    <---------YAB1   atcatcttcgtcgttccaagtttgaaacaaagattgatatcgatgtagcacagatatatttagggcaaatattaaaaactcgtttcatttttcattgtgg  7239100 ---------ANAC58 ---------ANAC58                                                                             <------- ---------ANAC46                                                            <---------DEAR3(1) --------At4g35610                                                          <---------DREB2C(2) ------>MYB111(2)                                                        ----------->HVH21   -------- -------MYB46(3)            <------MYB46(1)                              ----------->TGA1    <------- -----P               --------->SPL7                                   --------->ALFIN1      <------- ---GAMYB           <---------SPL7<-----------GT1                   --------->DAG2           <------- ----MYB46(3)      <---------ANAC58---------->ID1                  ---------->DOF2        <---------MYB52(1) ---YAB1           <---------ANAC58<---------TOE2(3)          --------->TOE1(3)      --------->GLK1(2) ---TOE2(3) --------->LBD16 <------MYB83                      --------->TOE2(3)--------->ALFIN1     - --CBF    <---------LBD16<---------MYB52(1)                --------->GLK1(1)<---------ANAC46 <-------   ttgctggttttgtccggagaggcgttcgataggttttgacgttttgtaatagaagacacagaaaccctaaaaagtgtgacggtggagcatctgttacgtt  7239200     <------------CBF    --------->ATHB12    <---------AHL20(2)                           --------->YAB1   --------->AHL20(2)                      ----------->GT1              <-----------GT1  <-----------TBP                        <-------MYC3                <---------ICU4 --ANAC58                                ------->MYC3                --------->YAB1             ----- ->ANAC55(2)                            --------->O2              --------->YAB1                <---- --ANAC58                               <---------O2<-----------GT1 --------->ICU4        --------->ANAC58 --ANAC55(1)                            ==================================bZIP_DOF        --------->ANAC46 --ANAC55(2)                            --------->TGA1a          --------->AHL20(2)       --------->ANAC58 ----->ZmHOX2a(1)                       --------->PIF3(3)        <---------AHL20(2)  <---------ARR14(2) --ANAC46 --------->PCF2                <---------TGA1a        <----------DOF2       --------->ARR14(2)   tcctatttattgggcccattagacacattagagactaggcccatgtggcaaaaataacattttcgctttaattatcacccttccacagttccactcaaat  7239300           ------>ZmHOX2a(1)       <-----------GT1  <---------AHL20(2)                   --------->YAB1 <---------AHL20(1)            <---------ICU4                           <---------At4g35610 --------->AHL20(2)           <---------ATHB12                    --------->GLK1(1) <---------AHL20(2)           <---------YAB1                   --------->ETT(2)  --------->YAB1 ------->CBF                --------->YAB1          --------->ZAT6<---------GLK1(1)          <------- -----ATHB12           <---------GLK1(2)---------->DOF2       ---------->ID1   <-----------HVH21 <---   caatttttttttcctagtaaatctatattctcatcattctatcaaagtcttctaacacgagtttgtcgatatccatctcactgtcataagatgtgatcag  7239400                                                                                     --------->ANAC55(1)                                                                                     --------->ANAC55(2)                                                        <---------GLK1(1)       --------->ANAC46                                                     --------->LBD16            ----------->HVH21                                                    <---------HSFB2a(2)      <---------ARR14(2)                                                    <---------ANAC46         --------->ARR14(2)                                                   <---------LBD16           --------->GLK1(2)                              <---------YAB1    <---------ANAC58          <---------ANAC58                  <---------YAB1                <---------ANAC58          <---------ANAC46                 --------->AHL20(2)       <------ZmHOX2a(2)          <---------O2    <---------ANAC55(2)              <---------GLK1(2)<-----------GT1 <---------ZAT2        <---------TGA1a--------------->AtSPL3              <---------ARR11(3)          --------->CCA1(2)          <---------ANAC46--------->ANAC46        --------->ANAC58   <---------AHL20(2)  --------->ZAT2        <---------ANAC58--------->ANAC58     --------->ARR14(2)    <---------YAB1<---------ARR14(2)          <---------ANAC58--------->ANAC58     <---------ARR14(2)  <---------ICU4  --------->AGP1 --------->GLK1(1) <---------ANAC58   --------->ANAC58  <---------YAB1      --------->ARR11(3)          <---------bZIP60(2)   --------->ANAC46  <---------AHL20(2)  --------->ARR14(2)          --------->O2  <---------ALFIN1   --------->ANAC58--------->YAB1    ---------->DOF2--------->HSFB2a(2)--------->ALFIN1 --------->SPL7 --YAB1 --------->ANAC58--------->ICU4   <---------ARR11(3)  <---------ANAC55(2)<---------ETT(1)  --- ------ZAT6   --------->ARR11(3)     ==========================================bZIP_DOF ------->TEIL   tgttcaagaaacgctagatttttataatttttattacagcaaagatccaagcttgcggaaatcaagtgaagacgtggagtatccgacacgtaccctaagt  7239500  Previous    Next  AGI:  At3g20710.1    Description:  F-box protein-related. Identical to Putative F-box/Kelch-repeat protein At3g20710 [Arabidopsis Thaliana] (GB:Q9LHQ0); similar to F-box protein-related [Arabidopsis thaliana] (TAIR:AT3G20690.1); similar to class S F-box protein [Nicotiana alata] (GB:ABR18786.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 7237917    to: 7239005    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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