Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <------NtERF2              ------>NtERF2                                <------NtERF2              --------->LBD16                              ------>NtERF2              <---------ATERF1(1)                         --------->DEAR3(1)             --------->ATERF1(2)                          --------->RRTF1(2)             --------->DEAR3(1)                           --------->RAP2.3(2)             <---------ATERF1(2)                          --------->RAP2.6(2)             <---------DEAR3(1)                          --------->RAP2.3(1)             --------->ZAT2            --------->ATERF1(1)                          <------NtERF2                   <---------ZAT2            --------->DEAR3(2)                          <---------RAP2.3(1)              --------->At4g35610           <---------At4g35610                          <---------ATERF1(1)              <---------At4g35610           --------->ZAT2                               ------>NtERF2                    <---------GLK1(1)           --------->At4g35610                       <-----------HVH21             <---------ANAC46           <---------ATERF1(1)                      <-----------RAV1(1)          ------>NtERF2           ------>NtERF2                        <-----------GT1   --------->WOX13(1) --------->ALFIN1       --------->AtLEC2                         <---------YAB1  <---------ATHB12<---------ALFIN1    <------ZmHOX2a(2)                       <---------DAG2--------->ANAC46    ------>NtERF2         <    <---------ATHB12                        --------------------->WRI1       <---------ETT(1)       - ------->MYB52(1)                           <----------DOF2--------->LBD16   --------->ANAC46  <----- ------>P  <---------ZAT2                 ------>MYB46(1)<---------LBD16<---------ALFIN1 --------->GLK1(1) ------>MYB52(1)                          ------>MYB83 <---------DEAR3(1)    ----------->HVH21 <-----   ttaccgatcatgcagccggcgaagaagagagcctgaacaagaccaactttatacttgtcgccgcaaatcaatccccactccgacaccgtggagctccctt  7228200     --------->ORA47(1)                                   <---------ARR14(2)     ------>NtERF2                                   ----------->HVH21    --------->RAP2.6(2)                              --------->ANAC46    --------->GLK1(1)    --------->RAP2.3(2)                              --------->ANAC58--------->ANAC58    --------->DEAR3(1)                               --------->ANAC58--------->ANAC58   --------->DEAR4(2)                                <---------ETT(1)--------->ANAC46   <------NtERF2                                    --------->DEAR3(2)   --------->At4g35610   --------->RAP2.3(1)                              --------->MYB46(3)  ------->TEIL  <---------ATERF1(1)                           <---------ETT(1)  ----------->HVH21  ------>NtERF2                                 ----------->HVH21 --------->ANAC46  --------->LBD16          ------>ZmHOX2a(2)   --------->DEAR3(2)--------->DEAR3(2) --------->ANAC46         <------ZmHOX2a(2)    --------->MYB46(3)<---------MYB55(2) ---------LBD16          --------->ARR14(2)<---------ATHB12      --------->MYB46(3)                 - -------->MYB46(3)       <---------ARR14(2)----------->HVH21 <---------ETT(1)                 ------- ----DAG2         --------->ARR11(3)   --------->ZAT14    --------->ARR14(2)              --------->ATHB12 -----DOF2        <---------ARR11(3)   <---------ZAT14    --------->GLK1(2)  <---------ALFIN1------>ZmHOX2a(2)   tacccgccgtccattcccaagaactcggatccaactcgcagttcaatgacccgacccgacaatccgacccgacgcatctccactcgggttcttgatcggc  7228300                                                                                       ------>NtERF2                                                                           ------>MYB83<------NtERF2                                              <-----------HVH21          <---------MYB111(2)                                             --------->TGA1a             <---------MYB111(1)                                             --------->bZIP60(2)         --------->AtMYB61   <-------                                             --------->O2                --------->DEAR3(1) ---------                                             <---------O2               <---------ZAT2 --------->LBD16                                             ==============================MYC_MYB    --------->ANAC46                                             --------->ANAC55(1)        --------->ZAT2--------->RRTF1(2)                                             --------->ANAC58      ------->GAMYB   --------->ANAC46 <                                    --------->ANAC58      --------->ALFIN1 ------>MYB46(1)  <--------   --------->YAB1           ---------->DOF2  --------->ANAC46     --------->MYB46(3)  --------->RAP2.3(2)  <---------YAB1            ===========================bZIP_DOF  <---------At4g35610  --------->RAP2.6(2) --------->ARR11(3)  --------->ANAC58        --------->ANAC58    --------->At4g35610  --------->DEAR3(1) <---------ARR11(3)  --------->ANAC58<---------ATHB12--------->ANAC58   --------->bZIP60(2) <-------- -------->YAB1  --------->ALFIN1    --------->ANAC58 --------->ANAC58  ------>NtERF2 --------->RAP2.3(1) ---->GT1     <---------ANAC46      --------->ANAC46 --------->ANAC46 <---------ALFIN1--------->RRTF1(3)   aaatatcatcaccatcgtgtggaacgcctctaaagcccaagcaatacacgtcaacacgaagtgtttcaactgccacctcccaaactcgccgcaatatctt  7228400                                                       --------->HSFB2a(1)                                                       <---------HSFB2a(1)                                                       <---------HSFC1(2)            <-----------GT1                                                      <---------KAN4(2) <---------MYB46(3)          < --YAB1                                              <---------GLK1(2)<-------GAMYB --------->DOF5.7(2) >ARR11(3)                                         --------->LBD16   <---------MYB46(3)   <---------MYB52(1) -----------GT1                          <----------DOF2           <---------At4g35610<---------DOF5.7(2) -AHL20(1)                 ------>ZmHOX2a(1)     <---------LBD16   --------->At4g35610<---------At5g28300 -ARR11(3)     --------->YAB1       <---------At4g35610--------->HSFC1(2)  --------->ETT(1)        --   tgtaacatctcatctatgcataatctctcctctccctccgcttctttcttcaccggaattttctctagcagcggttgtcggacatcgttaccgtttctat  7228500             --------->AHL20(2)             --------->ATHB51          --------->TOE2(3)                                                           <<<<<<<<<<MYB80       --------->GLK1(2)                                                        --------->ATHB12     --------->HSFC1(2)         <---------At5g28300                          <-----------------AGL3     --------->HSFB2a(1)       <-----------GT1                           <---------ANAC58   <--------     <---------HSFB2a(1)    <---------ICU4                               <---------ANAC58----------->HVH21  --------->LBD16       <---------YAB1                                --------->DAG2 <------MYB46(1) ---------LBD16   <---------TOE2(3)                                 ---------->DOF2  <------MYB83 ---->ZmHOX2a(1)<---------AHL20(2)         <------------------------ANAC81   <-----------------AGL2   cctccggagattccataatttatgttttgatttttacagtgtttttgtttttgtgtttgtgtttttgtttaaaaggcgttcttgatttggtttgacgcga  7228600                  <---------ANAC58                  <---------ANAC46                  <---------ANAC58                 ---------->ID1             <----------DOF2          <----------DOF2         <---------ANAC58         <---------ANAC46         <---------ANAC58      --------->ALFIN1     <---------ARR11(3)    <---------bZIP60(2)    --------->ARR11(3)   --------->ALFIN1       <---------CCA1(2)                 <----------DOF2    <---------AHL20(2)  <-  <------ZmHOX2a(1)     <---------AHL20(2)            ---------->ID1     <---------ANAC58       ----- *TSS--------->ATERF1(1)--------->AHL20(2)           <-----------GT1     <---------ANAC58 <---------YAB1 -ANAC46<------NtERF2 <-----------TBP         ------------>CBF   <-----------GT1       <----------DOF2   agaaggaggtggcttctttgtcgtatttatatctcttgtttatcggaaaacaatttttccttctttttttctctagcgttttttattctcttttgattta  7228700                                                     <-----------GT1                                                   <---------AHL20(2)    --------->TOE2(3)                                               <---------AHL20(2)      <---------TOE2(3)                    --------->ARR11(3)        --------->AHL20(1)       <---------TOE1(3)      <---------AHL20(2) <-----------GT1      <---------AHL20(1)      <-----------GT1 ----------GT1      <---------ARR11(3)       <---------AHL20(2)     <---------YAB1 ------>GT1      <---------TOE2(3)    <---------At4g35610      ----------->GT1           <----------DOF2   gtaactatttttttttgttgacgatattgactacatgctctgcttatatatattttaactatgtcatgttattaacgtttatgagttgtcactttgaaaa  7228800                                                                                           ------>MYB46(1)                                                                                         <---------MYB59                                                                                        -------------                                                                                        -------------                                                                                        --------->ANAC55(2)                                                                                        <---------ANAC55(2)                                                                                   --------->ATHB12                                                                                 <---------WOX13(1)                                                                               ----------->GT1                                                                        --------------->AGL15                                      <-----------GT1                   <---------------AGL15                        =================================================================MADS_MADS                        =============================================================================                        <---------------AGL15                          ==============================                        --------------->AGL15                          <-----------------AGL3             --------->ANAC55(2)   <---------------AtSPL8              <-----------------AGL2             <---------ANAC55(2)   --------------->AtSPL8              ----------------->AGL3        --------->bZIP60(2)     <---------YAB1     ---------->DOF2<---------YAB1 <--------P------>MYB83   ttagtaagacacatcatgtattatttctcaaattagtattgtacatttcatttcaaagtcaaaaacacatgattctatatatggttgattacctaatgtg  7228900                          ----------->GT1                    <XXXXXXXXXXXXXXXXXXXXMIR841B* ----------->GT1                    --------->ANAC46         --------->ICU4               --------->TOE1(3)                    --------->ANAC58         <---------YAB1               --------->TOE2(3) --------->YAB1<---------ICU4              --------->YAB1          --------->YAB1                  <- ----------->GT1    --------->ANAC58       <---------ICU4         <---------YAB1                <---- ---->AGL1    --------->ICU4            --------->YAB1    --------->ARR11(3)                  ------- ---->AG ----------->GT1 --------->AtLEC2 <---------ATHB12--------->AHL20(1)            --------->ANAC58 =====MADS_MADS<---------AHL20(2)     <---------WOX13(1)  <---------ARR11(3)            --------->ANAC58 =====MADS_MADS--------->AHL20(2)   --------->ATHB12     --------->AHL20(2)         <-----------HVH21   taatcgtgaattagtaattaatacgacatgctaaaaattgattaatcatgtttagaaaaatatatactatgataaacctgaaattgtgtcacacaatttt  7229000                                                 --------->YAB1                                                <---------YAB1      ------->TEIL                          <---------GLK1(2)                                   <----  ------->TEIL                              --------->ARR11(3)                                  <---- --------YAB1   --------->GLK1(1)           <---------ARR11(3)                              <-------- -----YAB1 --------->ANAC46         ---------->DOF2 --------->AHL20(2)          --------------->AGL15 -->YAB1 <-----------GT1   <-----------GT1----------->ARR10         --------->YAB1          ---------   gatgaatgtatataccacatttccatattatacgttttaaaagtaagattttcataaattttaaaattattcataacattcactaaaattagatgtgtat  7229100  Previous    Next  AGI:  At3g20660.1    Description:  ATOCT4 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER4); carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. similar to ATOCT1 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER1), carbohydrate transmembrane transporter/ carnitine transporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G73220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39080.1); similar to Major facilitator superfamily [Medicago truncatula] (GB:ABN09063.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); con Range:  from: 7225141    to: 7228601    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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