Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ANAC46                                                                             --------->At4g35610  ---------->DOF2                                                            <---------At4g35610 --------ANAC58                     --------->GLK1(2)                   --------->ANAC58 --------ANAC46         --------->YAB1  ---------->DOF2                 --------->ANAC46 --------ANAC58         --------->AHL20(2)    ---------->DOF2           --------->ANAC58 -->ATHB12    <----------DOF2 --------->TOE2(3)                     ----------->RAV1(1)      --------   tgcttaaagaaacagactttaaacaattaaaaccatagaatccaaagtaaaagcttaagaactaaaactccaacaagacagcaaacacacagttaacact  7223700                                                             --------->ANAC58                                                             --------->ANAC46                                                             --------->ANAC58                                                           ---------->DOF2                --------->STY1(2)                                        <---------DAG2 --------->ANAC58                   <---------STY1(2)                                        <----------DOF2--------->ANAC58                  --------->ANAC58 --------->YAB1                   ----------->GT1 ------->GAMYB              ---------->DOF2 ->ZAT6  ---------->DOF2    ---------->DOF2    --------->MYB52(1)        <----------ID1  --------->ANAC58   ctatcagaatgaaaagcttgatagaaactataaagaaggaaactttttccaacgggcaaacaaaagcaactctcagggacaaagaaggaactagcaaggg  7223800                                                                                                    -                                                                      --------->HSFB2a(2)          <-                                                                     <---------LBD16   --------->HSFB2a(2)                                               <------ZmHOX2a(1)    <---------LBD16    <---------HSFB2a(2)           <-----------GT1           --------->MYB52(1)          --------->HSFB2a(1)------->TEIL ----         <---------ATHB12            ----------->RAV1(1)    --------->ANAC58        <---------ARR14(2)     <---------YAB1--------->HSFB2a(2)      <------ZmHOX2a(1)    <---------HSFB2a(1)--------->ARR14(2)  <------ZmHOX2a(2)<---------HSFB2a(2)  ------->GAMYB       --------->ANAC58----------->ARR10   <----   agggatcatcaataaacccttgtggaacacaaatcgaatcaacagaggaggaagagagggaaacgaaaccttcgggattagatttgaatctggaagaagg  7223900           <----------DOF2        --------->ARR11(3)       ------>ZmHOX2a(1)    --------->At4g35610      <---------ARR14(2)                       --------->HSFB2a(1)       <----    <---------At4g35610      --------->GLK1(2)                 <-----------GT1                  <----  <------ZmHOX2a(1)          --------->ARR14(2)             <---------MYB46(3)                  ----- -------->ALFIN1     --------->GLK1(2)                      --------->MYB52(2)                  ----- -----ZmHOX2a(1)     --------->ARR14(2)                  ------------>MYB.PH3(2)            <-------- ----->ALFIN1        <---------ARR14(2)             <-----------RAV1(2)          --------->ARR14(2) --ZmHOX2a(1)    <------ZmHOX2a(1)     --------->YAB1 <---------At4g35610        <---------ARR14(2) -   aggaggagcagagcttgaaggagaatcggagaatcctcgtttcataacaacagttcagatgtttgttaccgaatgtttctctctatctgcaactctttga  7224000                               <---------------AGL15           <---------GLK1(1)                --------->ANAC58 ------>MYB83    --------->CCA1(2)           --------->YAB1      --------------->AGL15       <---------ANAC46        --------->YAB1         ------->GAMYB    --------->ARR14(2)       <---------ATHB12       ----------------->AGL3      <---------LBD16 -----------AtSPL3           --------->ANAC58   --------->ARR11(3) -----------AtSPL8    <---------ICU4---------->DOF2      --------->ALFIN1 ---------->AtSPL3    --------->YAB1--------->MYB52(1)  --------->ALFIN1      <---------ARR11(3) ---------->AtSPL8   <---------ATHB12           <---------ARR14(2)            --------->ARR11(3) --DOF2<---------ATHB51      --------->ANAC58 ----------->ARR10--------->GLK1(1)                *TSS ------>TEIL    --------->ANAC58 ------>MYB46(1)--------->ARR11(1)--------->TOE2(3)          <-------   tgtacttcaataataagaacccaattaagacaaccaaataaaggagaaaagatttggagttggggatttcttaaatcaaagatttgtttgtgtttctttg  7224100                                                <---------ANAC58                                                <---------ANAC58                                              ------>NtERF2                                             <---------DEAR3(1)                                             <---------RAP2.6(2)                                            <---------LBD16                                            <------NtERF2                                            --------->ATERF1(1)                                            <---------At4g35610                                           <---------ATERF1(1)                                           <---------ERF1                                           <---------RAP2.3(1)                                          <---------DEAR3(1)                                         --------->At4g35610                                         <---------ZAT2                               <---------YAB1                                         --------->ZAT2                             <---------AHL20(2)                                         <---------At4g35610                        --------->AHL20(2)                                         ----------->RAV1(2)                 ------>NtERF2                                         --------->ATERF1(1)                 ----------->RAV1(1)                                        <---------RAP2.3(1)                 <----------ID1                                       <---------ANAC58                     ----------->HVH21                                       <---------ANAC46                    --------->RAP2.3(1)                                   <---------ANAC58          ------>NtERF2 --------->ATERF1(1)                                  --------->STY1(2)          --------->ABI4(1)     <---------AHL20(2)                                  <---------STY1(2)          <---------At4g35610   <---------AHL20(1)                                  --------->ZAT2<---------ANAC46        <------NtERF2--------->AHL20(1)                             <-----------GT1--------->At4g35610     <-----------HVH21<---------AHL20(2)   --------->ANAC58     <---------YAB1 <---------RRTF1(2)--------->ANAC58  <------NtERF2       ------   ----------->GT1    <---------ICU4   <---------RAP2.6(2)   --------->At4g35610   --------->AHL20(2)   --------->ANAC58   --------->YAB1   <---------ANAC58  --------->ANAC58 <---------ATERF1(1) -------  --------->DAG2     --------->ICU4<---------ANAC58      --------->ANAC46<---------DEAR3(1) <-------- ---------->DOF2  <---------AHL20(2)   <---------RAP2.3(2)  --------->DEAR3(1)<------NtERF2 <-------- ---DOF2          --------->AHL20(2)  <---------LBD16  <-----------GT1  --------->ATERF1(1) <--------   gcaaaaagcaaaattttggtttaattatgttttactagcttgcggctgcggcttgtttcacgccgctccgagtcggaggcgacaaattattttggccggt  7224200                                                         <---------ANAC46                                              --------->GLK1(2)                                             --------->ARR14(2)                                         <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                            ----        --------->MYB52(1)              <xxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxsmallRNA(le3)     ----------->GT1                    <xxxxxxxxxxxxxxxxsmallRNA(fl3)        <---------MYB52(1)*TSS<    <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------GLK1(2)        <---------DAG2           ------    --------->DAG2                      <xxxxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxxxxsmallRNA(se3)  ---------->DOF2                   ------>ZmHOX2a(2)    <---------ANAC58   --------->ATHB12   <----- --->At5g28300                      <xxxxxxxxxxxxxxxxsmallRNA(fl3)  ------>NtERF2          ---------- ---->GT1                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -ANAC46<---------DOF5.7(2)       <---------ARR14(2)     <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------------WRI1               <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxsmallRNA(s) -ORA47(1)   <---------REM1(1)<xxxxxxxxxxxxxxxxsmallRNA(s)         --------->DEAR3(1) --------->AtLEC2   aaaaaaaaggtaacgatgtagaacgattccactggggatcgaacccagaatctctggtttcgtagaccagcgccttatccattgggccatggaacctgat  7224300                       --------->AHL20(1)        <---------ANAC46<---------AHL20(2)        ----------->GT1<---------AHL20(1)    <---------DAG2  <---------AHL20(2)    <----------DOF2 --------->AHL20(2)                                                           <--- -->ZmHOX2a(2)  --------->AHL20(2)                    <---------ARR11(3)                     -------- ---------MYB52(1)  --------->YAB1                    --------->ARR11(3)                     -------- --->ARR14(2)   --------->AHL20(1)             ---------->DOF2       --------->YAB1   <-------TEIL ----ARR11(3)   <---------AHL20(2)       --------->AHL20(2)  <------ZmHOX2a(1)    <---------------AtSPL8 ->RAV1(2)     --------->AHL20(2)      --------->AHL20(2) <-----------RAV1(2)  ---------->DOF2   <---   ctgttacttttcgtaaaattaattatatatttgtgaaacaaaaaaatataaaagaagacctcaggatagaataatactggtaaaagagttcataacatta  7224400                         <---------ZAT6                     <---------YAB1                   --------->GLK1(2)                   --------->ATHB12          --------->ZAT6                   <---------ICU4          <--------ATHB1                  <---------AHL20(2) ------TOE2(3)    <---------YAB1           --------->YAB1         --------->MYB46(3) ->TOE2(3)        --------->ICU4          <---------ATHB12       ------>MYB83 ->TOE1(3)    --------->YAB1              <---------ATHB51       ------>MYB46(1) ------YAB1--------->WOX13(1)         --------->AHL20(2)        --------->ANAC46                -----   acatagtttttgacaatcacattattagtgtaaacttcaattcaataatactagagaatttgataccaacaacatgtttattttcatgggaatggcattg  7224500                                         <------MYB83                     --------->At5g28300 <------MYB46(1)                                          ===                    ----------->GT1     --------->MYB59                                           <--            ----------->GT1         <---------YAB1                      <---------AtLEC2    ---------      <---------ANAC55(2)          <---------ARR11(3)            <---------AHL20(2)         <--------      --------->ANAC55(2)          --------->ARR11(3)           <---------AHL20(2)      --------->YAB1 <---------ZAT6  <---------ALFIN1 --------->YAB1                --------->AHL20(2)     --------->ICU4 ---->YAB1 <---------ZAT6        <---------YAB1       --------->YAB1   <-------TEIL    <---------YAB1   atagtgctacgtactggtaacaccgtaacaagtctatgatatttggtattttgccatcaaaactaattttatgtgcatgacaacatactatgattatctt  7224600  Previous    Next  AGI:  At3g20650.1    Description:  mRNA capping enzyme family protein. Identical to mRNA cap guanine-N7 methyltransferase 1 [Arabidopsis Thaliana] (GB:Q9LHQ7;GB:Q3EB33); similar to mRNA capping enzyme family protein [Arabidopsis thaliana] (TAIR:AT3G52210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39085.1); contains InterPro domain mRNA (guanine-N(7))-methyltransferase (InterPro:IPR016899); contains InterPro domain mRNA capping enzyme, large subunit; (InterPro:IPR004971) Range:  from: 7220805    to: 7224096    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g20655.1    Description:  pre-tRNA. tRNA-Arg (anticodon: ACG) Range:  from: 7224224    to: 7224296    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version