Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->ZAT2                              <---------ZAT2                              <---------At4g35610                            <---------ALFIN1                            --------->MYB46(3)                          ------>NtERF2                         --------->DEAR3(1)                        --------->ERF1                       ------>NtERF2                       --------->ABI4(1)                       <---------ATERF1(1)                      ------->GAMYB                      --------->DEAR4(1)                      --------->ANAC46                      --------->DREB2C(2)                      --------->ANAC58                      --------->ANAC58                                 ------>ZmHOX2a(1)                      --------->DEAR3(1)                           <---------ARR14(2)                   <---------ALFIN1                                --------->ARR14(2)                   --------->AtMYB61                              --------->At4g35610                  --------->MYB46(3)                              <---------At4g35610        ------>ZmHOX2a(1)<---------ALFIN1                       <---------ALFIN1                    <     ------>ZmHOX2a(1)--------->RAP2.6(2)                   <---------ZAT2                          -    <---------ALFIN1--------->ABI4(1)        <xxxxxxxxxxxxxxxxxsmallRNA(si3)                        <  ------>NtERF2  ------>MYB83 --------->At4g35610   <---------ALFIN1  <---------ALFIN1           ----  <---------ATERF1(1)--------->MYB46(3)     ------>ZmHOX2a(1) ----------->RAV1(1)                <--- --------->DEAR3(1)--------->DEAR3(1)    ------>ZmHOX2a(1)  --------->ZAT2                      ----- <---------ALFIN1------>MYB46(1)        <---------ALFIN1  --------->ANAC46                    ------- ------->LBD16  --------->ANAC46     <---------ALFIN1    --------->LBD16               ----------->RAV1(2) --------ATERF1(1)<---------MYB55(2) --------->AtMYB61  --------->ANAC46  ------>ZmHOX2a(1)  -------- ---->NtERF2  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ZAT18<---------ZAT2     <---------ALFIN1 -----ATERF1(1)--------->MYB46(3) <---------ALFIN1 --------->ZAT18--------->ZAT2  --------->ANAC46  -   ccgcctcctcctccaaacccaccaccgccaccagctccacctcctcctccgagtccacccccagcaccagctcctcctccaaaccctccacctgaaccac  7140800          ------>NtERF2         --------->DREB2C(2)         ------->GAMYB         --------->RAP2.6(2)         --------->DEAR3(1)         --------->ANAC46        --------->MYB46(3)              ------>NtERF2        --------->DEAR3(2)             --------->ANAC46       ------>NtERF2                   <---------ALFIN1       <---------ATERF1(1)         ------>MYB83      <---------ALFIN1             ------>MYB46(1)             <---------ARR14(2)                  <-     <---------ABI4(2)            --------->ABI4(1)            --------->ARR14(2)                 <--     --------->MYB46(3)          <---------ALFIN1             --------->ZAT2                      ---   --------->PCF2               --------->MYB46(3)            --------->At4g35610                 ---   <---------TCP20            <---------ALFIN1                <---------ZAT2          <---------At4g35610  ------>MYB83                --------->DEAR3(1)       --------->At4g35610            --------->ZAT2  ------>MYB46(1)             --------->AtMYB61        --------->ABI4(1)              --------->At4g35610 --------->ANAC46            --------->MYB46(3)        <---------At4g35610     ------>ZmHOX2a(1)  <-- ---------ALFIN1           <---------ALFIN1           <---------ALFIN1     --------->ARR14(2)   <---- -------->AtMYB61         --------->At4g35610      --------->DEAR3(1)      <---------ARR14(2)   ----- ---------MYB55(2)       --------->ANAC58          --------->AtMYB61      ------>MYB83<---------ZAT2 ----->AtMYB61           --------->ANAC58         <---------MYB55(2)      ------>MYB46(1)    <------- ------ALFIN1           --------->AtMYB61       --------->AtMYB61       <---------MYB111(1)  -------- ---->MYB46(3)       <---------ALFIN1 --------->MYB46(3)      <---------At4g35610 ------>ZmHOX2a(1)-- -->AtMYB61    --------->ARR14(2)--------->DEAR3(1)<---------ALFIN1------>ZmHOX2a(1)<---------ALFIN1 ->MYB46(3)    <---------ARR14(2)--------->AtMYB61--------->MYB46(3)   --------->ANAC46     --------- -------->MYB46(3) ------>ZmHOX2a(1)--------->DEAR3(1)--------->DEAR3(1)--------->AtMYB61 <---------ALFIN1   caccagccccaccgccaaatcctccaccagcaccaccacccccaccaagaccaccaccgctcccagctcctccaccaaatcctcctccagctccaccacc  7140900                             --------->ARR14(2)                             <---------ARR14(2)                            <---------ZAT2                            --------->ZAT2                            <---------At4g35610                        ------>NtERF2                     ------>NtERF2                     --------->ABI4(1)                     <---------ATERF1(1)                    <---------ALFIN1                    --------->DREB2C(2)                    --------->DEAR3(1)                   --------->DEAR4(2)                   <------NtERF2                                  <---------ATERF1(1)                   --------->ATERF1(1)                            ------>NtERF2                   --------->MYB46(3)                            <---------ALFIN1                   --------->ORA47(2)                           <------NtERF2                  --------->ABI4(1)                             --------->ATERF1(1)               <-----------HVH21                                --------->DEAR4(2)              ------->GAMYB --------->At4g35610               --------->RAP2.3(2)      ------>ZmHOX2a(1)--------->DEAR3(1)                     --------->RAP2.3(3)   ------>ZmHOX2a(1)------->GAMYB               <---------ATERF1(1)  <---------ALFIN1------>NtERF2                <---------ALFIN1<---------ATERF1(1) --------ARR14(2) <---------ATERF1(1)          --------->DEAR3(1)--------->DEAR3(1) -------At4g35610--------->AtMYB61           <---------ATERF1(1)--------->RAP2.3(1) ------>At4g35610--------->DEAR3(1) ------>NtERF2             --------->DEAR3(1) ------>ZAT2  --------->ANAC58      --------->LBD16           --------->RAP2.6(2) -------ZAT2  --------->RAP2.6(2)  --------->ANAC46      ---------->DOF2 -----ALFIN1  --------->DEAR3(1)   --------->DEAR3(1)   --------->AtMYB61 ---->MYB46(3)--------->ANAC46    <---------LBD16      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --ALFIN1------>ZmHOX2a(1)<---------ALFIN1  --------->RAP2.6(2)------>NtERF2                --------- ->AtMYB61    --------->ANAC58   <---------ATERF1(1)   --------->ANAC46        --------->ZAT18 ------->ARR14(2)<---------ALFIN1------>ZmHOX2a(1) ------>ZmHOX2a(1) ------>ZmHOX2a(1) ------>NtERF2 >MYB46(3)   --------->MYB46(3) <---------ALFIN1------>NtERF2--------->RAP2.3(1)--------->AtMYB61  --   agctcctcctcctaaaccgccaccgcctccagctcctccgccaagaccgcctcctccaccaaagccgcctcctccaccaagaccactgcctccaccaata  7141000                            <------MYB46(1)                    ------>NtERF2       <---------ALFIN1     <------MYB83      --------->MYB46(3)    <---------MYB46(3)                                  <<<<<<<<<<<<<<<<<LFY     ------>ZmHOX2a(1)     <---------AtMYB61                               <---------MYB52(1)  <---------ATERF1(1)----------->RAV1(2)                           <---------ZAT2  ------>NtERF2    --------->DEAR3(1)                --------->HSFB2a(2)  <-----------HVH21 <---------ALFIN1<---------ATERF1(1)               ------>ZmHOX2a(1)     ------>ZmHOX2a(1) --------->DEAR3(1)<---------ALFIN1       <----------DOF2          --------->ZAT2 <---------ALFIN1 >AtMYB61       --------->AtMYB61      <---------ARR11(3)          <---------At4g35610 ---->NtERF2  <---------ARR11(3)       --------->ARR11(3)          --------->At4g35610             --   ccgcctcctccaccgagacctccgcctggatggtggaagaatgtcttttggtcctcgagaccactcttcagcttcctgttagcgacactggcaaatgaag  7141100             <---------RAP2.6(3)             ------>NtERF2            --------->RAP2.3(3)            --------->DREB2C(2)            --------->RAP2.3(2)            --------->DEAR3(1)          <---------ANAC58            --------->RAP2.6(2)         <---------ANAC46            ----------->HVH21           <---------bZIP60(2)            <---------ETT(1)            <---------ANAC58           --------->DEAR3(2)--------->ANAC58           --------->RAP2.3(1) ---------->DOF2          --------->At4g35610--------->ANAC58       ---------->DOF2   ----------->RAV1(1)  --------->ANAC58                 --------->ICU4     ---------->DOF2    <----------ID1 <-----------------------TaNAC69(2)      <---------YAB1     --- --------->ANAC58--------->ANAC58  ----------->GT1                    <---------ANAC58  --------->GLK1(1) --------->ANAC58--------->ANAC58 --------->DAG2                      <---------ANAC46<------ZmHOX2a(1) -------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(i)    --------->ANAC58        <---------ANAC58*TSS   <-------   tgaaagcaaaagagccgacaagtaaggcaacaagaaagagtgacttggaagccatgtcgatttttgtgttttgcgtatgtgatgatgaggaactctatca  7141200                                                                                                  <--                                                                                                  ---           <-----------TBP                                                                     <-----         <-----------TBP                                                                       ------       ----------->GT1                                                                        <------    --------->DAG2              --------->At4g35610                                         <--------    <---------TOE2(3)           --------->ZAT2    --------->AHL20(2)                        ---------  <---------ATHB12         <---------ANAC58     <------------CBF                  <---------ZAT6----- --------->CBF             <---------ANAC58  ------------>CBF        ----------->GT1  ----------->GT1 ----HVH21 --------->AHL20(2)   <---------At4g35610      ---------->DOF2---------->DOF2    --------->ICU4   gccaataaggtgtttatatagaccatttggcatgagctgaagaatcaaacaattgaataaaaagagggagagagtaaagttttagagtgagtaattatca  7141300     --------->At4g35610     <---------At4g35610     ----------->RAV1(2)                                 --------->ZAT14     =============================RAV                   <---------ZAT6 -------AHL20(2)                                 <---------MYB111(2) ------>AHL20(2)                                 --------->MYB46(3) ---HAHB4                                        <---------MYB111(1) --->YAB1                         <---------AHL20(2)    --------->ALFIN1          <-------MYC3 ---YAB1                         <---------AHL20(2)-------->P                     ------->MYC3 -ICU4                           --------->AHL20(1)--------->MYB52(1)          <---------------AGL15 >YAB1                           --------->AHL20(2)>>>>>>>>>>>>>>>>>LFY        --------------->AGL15 ---->TOE2(3)         <-----------RAV1(1)        <---------MYB46(2)    <-----------GT1             <-   ttaattcatctgcccatctaattcatgttggcaaatttaatgcaatccctaactaccagtgttgacaaacatgttactcatccacatgtagtagacccct  7141400                                                                                                 <---                                                                                               <-----                                                                 <------NtERF2                 ------                                             <----------DOF2     --------->At4g35610         <-------             --------------->AtSPL8    <---------ANAC58          --------->ZAT14      --------->ARR11(3)          <---------ZAT6               <---------ANAC58          <---------ZAT14      <---------ARR11(3)      <----------DOF2     --------------->AtSPL8      --------->AHL20(2)       --------->GLK1(2)----- ---------DOF2            <---------------AtSPL8      <---------AHL20(2)       ------->TEIL<---------TOE2(3)   tctttattctttgtgttagtactacttaatagtactcattttcttgcctttcacatttaaatttggctgcagtatttgatgaatctgagattttagatta  7141500                                                                            <---------TOE2(3)                                                                           ---------->DOF2        --------->LBD16                                                  <---------YAB1      <---------LBD16                                                  --------->ATHB51 ------YAB1               <---------TOE2(3)                            <---------ICU4 ----KAN4(1)            <---------AHL20(2)                             <--------HAHB4 --->KAN4(1)           --------->AHL20(2)                             --------->ICU4 --GLK1(2)----------->HVH21                                     --------->ZAT18 ---->KAN4(2)  --------->LBD16                  <---------------AtSPL8<---------YAB1   ttcttatgtccggagaccggagttatttaatgtttttgttaatgtgttttttagtacattttggtgtccaccattattaaagaaaacaacaacaaggtat  7141600                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                                --------->ICU4                                                                <---------ATHB51                                                                --------->AHL20(2)                                                                <---------AHL20(2)   <---------ANAC58                                                      <---------ICU4       <-----------GT1         --              <---------YAB1    --------->ANAC46     --------->ICU4        --------->ZAT6 <---------ANAC46         <---------ICU4<-----------GT1             --------->YAB1--------->AHL20(1)  <---------ANAC58   ctatattttcatgtttacgataaataaactttacacattacattggaagagaataataagtatgaaataatttgttttcactacatttcttgacttggac  7141700  Previous    Next  AGI:  At3g20470.1    Description:  pseudogene, glycine-rich protein, identical to a region of GB:JQ1064 from (Arabidopsis thaliana) ( Plant Cell 2 (5), 427-436 (1990)) Range:  from: 7140446    to: 7141186    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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