Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ANAC46                        ----------->GT1                      --------->ANAC58                      <---------ANAC58                       --------->ANAC46                      <---------ANAC58                       --------->ANAC58                  <---------ANAC58                   <-----------HVH21                  <---------ANAC58                  --------->TGA2(1)                  <---------ANAC46                --------->YAB1    --------->ANAC46               <---------CCA1(2)                  <---------ICU4 --------->ZAT14             <---------REM1(1)             --------->ANAC58--------->ANAC58           <---------ANAC46                --------->ANAC58<---------ALFIN1           <---------ANAC58            ------>NtERF2--------->bZIP60(1)           <---------ANAC58        <---------ETT(2) <---------bZIP60(1)         <-----------HVH21         --------->ETT(2) <---------TGA2(1)        <-----------RAV1(1)       --------->DDF1 <---------ATHB12<---------ZAT14              -------        ------->GAMYB <---------ANAC46--------->ANAC46     --------->ANAC58                   -------   tttttgttaactgtcgtgtagcttgtgtgtaaatatgtcgacgacaagtcaatgatgtcacacacactacacaaaacaaaacactgcttcaaactacctt  7115800                                                               --------->At4g35610                                                               <---------At4g35610                                                        <---------ANAC58                   --------->ANAC58                     <---------ANAC58                  <---------AHL20(2)                   --------->ANAC46             <-----------GT1<---------ZAT2         <---------ANAC55(2)        --------->ZAT18---------->DOF2   --------->TOE2(3) <-----------HVH21     ----------->GT1 -->TOE1(3)        --------->ANAC58--------->YAB1 <---------ANAC58        --------->TOE1(3)   <------ -->TOE2(3)   <---------YAB1      <---------ATHB12<---------ANAC58        --------->TOE2(3) <--------   caacttcgagtccattactataagcaaaagtcccaaatcaaaacatcaattttcttgttcttgtcagctactcaaacctcaacatgttacatatattttt  7115900                                          <--------ATHB1                                         --------->ICU4                                       <------                                      <------ZmHOX2a(1)                                       <------                                   <---------LBD16                                      -------------                 <---------YAB1----------->HVH21                                        <------------ ---AHL20(2)<---------ICU4   --------->At4g35610                                        ------------- -AHL20(2) <---------ATHB12  <---------At4g35610                            <----------DOF2 <--------   tcagataaaacaaatcattctcatcgttcttatctgaccaggaataattcaatggaagtatgagtttgactcggtttccttttgatattagtcgtacttt  7116000                                  -------->HAHB4                                  <---------ICU4                                  <---------AHL20(2)                                 --------->ICU4                                 <---------YAB1                               --------->YAB1                               <---------ICU4                                                       <                            --------->YAB1                                                          -      <-----------GT1    ------>ZmHOX2a(1)                                                          < ---DAG2             <---------RAP2.6(3)                                                           <- ----DOF2           --------->RAP2.6(2)                                                          ---- -->AtSPL3          --------->DEAR3(1)  <---------YAB1                                          <---- ---AtSPL3         --------------->AtSPL3<---------ICU4                                   --------->AHL20(2) -->AtSPL8     ---------->DOF2<---------YAB1                     --------->ARR14(2) <----------DOF2-- -TOE1(2)--------------------->WRI1   --------->YAB1        <-----------GT1 <-----------GT1<---------AHL20(2)   tcaacattttacctagatagagccgtcctcttataattattcatcatttcatgcttctcatgttacatttctgcaatttttcaactctttgattttatat  7116100                                                                                               <-----                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                           --------->bZIP60(2)                                                                                           --------->ANAC46                                                                                           --------->O2                                                                                           --------->TGA1a       <-----------GT1                                                                     <---------O2 --------HAHB4                                                                             ========== -------->ATHB12                                             ----------->GT1             <---------ALFIN1 ---------ICU4                          --------->AHL20(2)  <---------TOE2(3)        <---------ANAC58 --------YAB1                         --------->TOE2(3)     <---------TOE1(3)      <---------YAB1 ----->YAB1<----------DOF2  <---------At4g35610<---------ANAC58                 ----------->HVH21 -----AHL20(2)--------->YAB1----------->RAV1(2)<---------ANAC58    <---------AHL20(2)<---------ANAC58 ------->ICU4 --------->TOE2(3)      --------->YAB1  ------------>CBF           --------->ALFIN1   aatcatttgtttcctttcttaatcaaatccatctggctaacattatttagcttgatgcaattaaggtatattatctaatgaggtgatgcttccacgtctt  7116200                                         <----------DOF2                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)       *TSS                      <---------ARR14(2)       <---------YAB1            <---------GLK1(2)      --------->AHL20(2)         --------->ARR11(3)      <---------AHL20(2)         --------->ARR14(2)                                                 <     --------->YAB1              <---------ARR14(3)                                                --    <---------YAB1               --------->ARR14(3)                                               <-- <---------AHL20(2)              <---------ARR11(3)                                              ---- <---------YAB1                 --------->RVE1(1)                                                <--- --------->AHL20(2)            ----------->ARR10                                         --------->DAG2 -----DOF2                   ---------->DOF2     <-----------GT1  <----------DOF2       ---------->DOF2 =====bZIP_DOF        --------->YAB1 ------>ZmHOX2a(1)     <------------------------ANAC81   <-------   tatattattataatccctcaacaattttaaaaaaagatcctgactttcaattttctctcttgtttcttcttttgatcatcttcaacaaaaaaaagttacg  7116300                                                                <---------DEAR3(1)                                                                <---------MYB46(3)                                                  <----------DOF2                                                 =============HOX2a_HOX2a                                                 ------>ZmHOX2a(2)             <---------WRKY12                    --------->HSFB2a(1)             <---------WRKY38(1)                ==============HOX2a_HOX2a           <-----------HVH21          ---------->DOF2----------------->AGL1       <---------LBD16         <---------ANAC58 <------ZmHOX2a(2) ----------DOF2                <---------ANAC58--------->ARR11(3)                         --------->TOE1(2) ---->ZmHOX2a(2)              <---------ZAT2   --------->ARR14(2)                        <---------ICU4 ----ZmHOX2a(2)           <---------At4g35610  <---------ARR11(3)                        --------->YAB1 ----->ARR11(3)--------->At4g35610 --------->At4g35610        <-----------HVH21          --------->ATHB12 ------ARR11(3)<---------At4g35610 <---------At4g35610 ------>ZmHOX2a(1)               --------->ARR11(3) ----GT1 --------->LBD16  --------->At4g35610  <---------ARR14(2) <------NtERF2<----------DOF2   atctttctctccgggtcatcggaatttgagctagcttagctaaagttccgatctttcctctctgggtcgtcggaatttgagctttttaaaatcatgggaa  7116400                                                                                     --------->CCA1(2)                                                                                     <------ZmHOX2a(2)                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                                    --------->ARR14(2)                                                                                    --------->AGP1                                                                                    <---------ARR14(2)                                                                                ------->GAMYB                                                                               --------->MYB46(3)                                                                               <---------ATHB12    --                                                                              ------>MYB46(1)   -----                                                                              -------->P        <----                                                                            ------->GAMYB  <---------                                                                           --------->MYB46(3)   -----                                                           --------->At4g35610------>MYB83--------->DEAR3(1)                              ----------->RAV1(1)       <------ZmHOX2a(2)  <---------MYB52(2)<-------                        <---------REM1(1)----------->GT1====================HOX2a_HOX2a<---------ALFIN1                    <---------WOX13(1)   --------->YAB1<---------ARR11(3)<-----------GT1<---------At5g28300         --------->ANAC58  --------->ANAC58            <---------AGP1=======================HOX2a_HOX2a         --------->ANAC58  --------->ANAC58      --------->ZAT6      <------ZmHOX2a(1)--------->MYB46(3)   attgttttgccaagaaccatggattgatgaagccacagcaaaatggtaataccactagatcagttgaagtaggagtaaccaaccaagatccaccgtcgta  7116500                                                                               <---------At4g35610                                                                            --------->ZAT2                                                                            --------->ATERF1(1)                                                                            <---------ZAT2                                                                            <------NtERF2                                                                           <---------RRTF1(1)                                                                           <---------RAP2.6(1)                                                                           <---------ATERF1(1)                                                                           <---------RAP2.3(1)                                                                           <---------ERF1                                                                           ------>NtERF2                                                                           <---------DEAR3(2)                                                                          <---------DEAR3(1)                                                                          <---------RAP2.3(2)                                                                          <---------ANAC46                                                                          <---------RAP2.3(3)                                                                          <---------RAP2.6(2)                                                                          <---------ATERF1(2)                                                                          --------->ATERF1(2)                                                                         <------NtERF2                                                                         <---------At4g35610                                                                         --------->ATERF1(1)                                                                         --------->DREB2C(1)                                                                        <---------ATERF1(1)                                                                        ------>NtERF2                                                                        <---------RAP2.6(1)                                                                        <---------ERF1                                                                        <---------RRTF1(1)                                                                        <---------ORA47(2)                                                                        <---------RAP2.3(1)                                                                        <---------DEAR4(2)                                                                       <---------RRTF1(3)                                                                       --------->ALFIN1                                                                       <---------DREB2C(2)                                                                       <---------RRTF1(2)                                                                       <---------RAP2.3(2)                                                                       <---------RAP2.3(3)                                                                      --------->ATERF1(1)                                                        ------->GAMYB<---------ATERF1(1)                                                        --------->AtMYB61--------->DEAR4(2)                                                       <---------MYB55(2)--------->RAP2.3(1)                                                       --------->MYB46(3)<---------DREB2C(1)                                                     --------->WOX13(1)<---------RAP2.6(2)                                                    <---------WRKY38(1)<---------DEAR3(1)                            <------NtERF2          --------->WRKY18(1)<---------ABI4(1)                           --------->LBD16         <<<<<<<<<WRKY6    --------->ALFIN1                         <---------LBD16  <---------ANAC46          <---------DEAR3(1)                         --------->ATERF1(1) --------->REM1(2)     <---------ANAC46      --------->ANAC58  --------->ZAT2    <---------ANAC55(2)    --------->REM1(2)  ----------->RAV1(1)      --------->ANAC46  --------->At4g35610--------->LBD16      --------->ALFIN1  --------->At4g35610      --------->ANAC58--------->MYB46(3)  ----------->GT1  --------->DEAR3(1)  <------NtERF2 ------->ANAC46      <---------ZAT2       <---------ANAC58 <---------ALFIN1<---------MYB46(3) ---->ARR14(2)       --------->At4g35610  <---------ANAC58 --------->AtMYB61<---------At4g35610 -----ARR14(2)       --------->ZAT2       <---------ANAC55(1) --------->DEAR3(1)  <---------At4g35610 --HVH21             <---------At4g35610  --------->ANAC55(2) <---------ANAC46 --------->At4g35610 ---->ZAT14      --------->ANAC46      <---------ARR14(2) <---------MYB55(2)<-------GAMYB<------ZmHOX2a(1) --ANAC46     --------->MYB46(3)       --------->ARR14(2) --------->MYB46(3)--------->At4g35610   tactccacaagcgagaaccactcagcagccggagaaaccaggttccgtgaatagtcaaccaccaccgtggagggcggcggctgcagcaccaggactaagt  7116600                                                              <<<<<<<<<<<<<<<<<LFY                                                         <----------DOF2                                                      <---------ARR11(3)                                                  ---------->DOF2                <------MYB83                                                 --------->ALFIN1               --------->MYB59                                               <---------O2  <-----------------AG<------MYB46(1)                                               <---------TGA1a<---------------AGL15 <---------ANAC58                                               ====================================bZIP_DOF                                               <---------ANAC55(2)          --------->ARR11(3)                     --------->AHL20(2)        --------->O2  <-----------------AGL1 <---------ANAC46        --------------->AGL15                  <---------ANAC46      <---------ANAC46        --------->AtMYB61                      ==============bZIP_DOF----------->GT1<---------ANAC58        ======================================================================MADS_MADS       --------->MYB46(3)             ===================bZIP_DOF   <---------MYB46(3)     --------->AtMYB61                <----------DOF2 --------->ARR11(3)---------->DOF2   cccaagaccaccactaagagcaattcaatactagagaacgctttcgaagacgtgaagctcttttacacattgggtaaagagctaggtcgtggtcaatttg  7116700  Previous    Next  AGI:  At3g20410.1    Description:  CPK9 (CALMODULIN-DOMAIN PROTEIN KINASE 9); calmodulin-dependent protein kinase/ kinase. similar to CPK15 (calcium-dependent protein kinase 15), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G21940.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to CPK33 (calcium-dependent protein kinase 33), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G50700.1); similar to protein kinase [Medicago sativa] (GB:CAA65500.1); similar to calmodulin-like domain protein kinase isoenzyme gamma [Glycin Range:  from: 7116207    to: 7119127    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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