Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->ANAC46 ------->ANAC46 ------->ANAC58 ------->ANAC58                                                  ---------->DOF2 ------ALFIN1                                                 ------------------------>ANAC81 ---->ZAT14                                             --------->ANAC58 --->AtMYB61                                            --------->ANAC58 ----ALFIN1                                             --------->ANAC55(1) -->ANAC58                                              --------->ANAC55(2) -->ANAC58                                              --------->ANAC46 -->ANAC46                                              <---------ANAC55(2) >ANAC46                <-----------GT1                <---------LBD16                       -------- >ANAC58          ----------->GT1             <---------YAB1 --------->At4g35610         --------->MYB46(3) >ANAC58       <----------DOF2--------->ARR14(2)--------->WOX13(1)                  --------->YAB1   cacacaacatcacatttctttagtaaaaaccctattctcaaacccttgatcattcaatacggaagatgaaagaaactaaaacccaatactaacaaacata  7111400               --------->GLK1(1)      --------->YAB1     <---------YAB1    <---------TOE2(3)                                             --------------->AtSPL8   --------->YAB1           <---------DAG2                        <---------------AtSPL8            -  --------->ICU4 <---------ATHB12            --------->YAB1      ---------->DOF2         ----------->GT1 ->YAB1 <---------YAB1      <----------DOF2 <-------TEIL    <----------DOF2       ----------------->AGL1   tgcattgatgataactgaaatcaatttcaactttttgacactgacattcataaaaatcgcatctttagaaagtactaatatcggtccaaattggagaaaa  7111500                                                                                                    -                                                                                                    -                                                                 --------->GLK1(2)                 <-                                                              --------->ARR11(3)                   --                                                        <---------HSFB2a(2)                        <-                                                        --------->HSFB2a(2)                        --                                                        <---------HSFC1(1)                         <-                                                       ------>ZmHOX2a(2)                           --                                                      --------->CCA1(2)                           ---                                                      <------ZmHOX2a(2)                           ---                                                     <---------ARR11(3)                          ----                                                     --------->ARR11(3)                          ----                                                     --------->ARR14(2)                         <----                                                     <---------ARR14(2)                        <-----                                                     --------->AGP1                            <-----             --------->At4g35610                    --------->GLK1(1)                          <-----         <-----------TGA1                           <---------GLK1(1)                         <------         <-----------HVH21                        <------ZmHOX2a(1)                       --------->HSFB2a(1) ---------->GT1       --------->At4g35610  ---------->DOF2    <---------ARR11(3)          <----------   ttgagtaaaatcgtcaccagaagaagcagagacagagagggaagcgaaaggaggagatctagaagacattctgaagagagaaacaccagcgaatgttgcg  7111600         --------->ZAT2         <---------ZAT2        --------->ANAC46     ------>NtERF2  ------>NtERF2  <---------ATERF1(1)  <---------RAP2.6(3) ------->GAMYB --------->RAP2.3(3) --------->At1g77200 --------->DREB2C(2) --------->RAP2.6(2) --------->DEAR3(1) ----------->HVH21 <---------ETT(1) --------->ANAC46 -------->DEAR3(2) -------->RAP2.3(1) --------At4g35610 ------->ZAT2 --------ZAT2                                                                               --------- ------->At4g35610                                                                          --------- --------ATERF1(1)                                                                          --------- ---->NtERF2            <---------SPL7        --------->ALFIN1                          ------>MYB83 ------>RAP2.3(3)      <---------ANAC58     <---------ANAC46                           --------->ORA47(1) ------>DEAR3(1)       <---------ANAC58    <---------DEAR3(1)                         --------->DEAR3(1) ----->ATERF1(1) --------->AtMYB61        <---------ZAT14                    <---------At4g35610 ----->ERF1  --------->MYB46(3)           --------->ZAT14                    --------->At4g35610 -----At4g35610 --------->MYB46(3)        --------->ZAT18  <-----------RAV1(1)------>ZmHOX2a(2) ----ANAC58  --------->DEAR3(1)          --------->ALFIN1  --------->ALFIN1 --------->ARR14(2)   ---- ----ANAC58 --------->At4g35610      <---------ZAT14       <---------ZAT6   <---------AGP1  --------- ----ANAC46 <---------At4g35610   <---------ANAC46        >>>>>>>>>TAC1     <---------ARR14(2)   <--- ---LBD16<---------At4g35610    <---------ZAT14          <---------ANAC46   ------->TEIL------>MYB46(1) -RAV1(1)--------->At4g35610   --------->ALFIN1    <---------AtMYB61  --------->ICU4 --------->DEAR3(2)   cagccgacaccagcagcgaccaatggggtacgagtggagcgaagtgcggtggagaggtcgagtgttggagtatttatggatctgaaaaccgaccaagtca  7111700               --------->RAP2.3(3)               ----------->HVH21               --------->DEAR3(1)               --------->RAP2.3(2)               <---------ETT(1)               --------->DEAR4(1)               --------->DREB2C(2)               --------->At1g77200               --------->RRTF1(3)              --------->DEAR3(2)              --------->ATERF1(1)              <------NtERF2              --------->RAP2.3(1)              --------->ERF1              --------->ORA47(2)              --------->RRTF1(1)             <---------ATERF1(1)             ------>NtERF2             <---------RAP2.3(1)            <---------DEAR3(1)            --------->RAP2.3(2)            --------->DEAR3(1)           --------->RAP2.3(1)           --------->ERF1           --------->RAP2.6(1)                                            >>>>>>>>>TBF1           --------->RRTF1(1)                                      <------MYB83          ------>NtERF2                                            --------->At4g35610          --------->LBD16                                          <------MYB46(1)          <---------ATERF1(1)                                     --------->MYB59          <---------RAP2.3(1)                                     --------->MYB111(2) >ANAC58 <---------DEAR3(1)                                       --------->MYB46(2) >ANAC58 --------->ANAC46                                         --------->MYB111(1) >ANAC46<---------LBD16                                          <--------P ----->At4g35610<---------RAP2.6(3)                              <---------MYB55(1) >bZIP60(2)--------->ATERF1(1)                --------->O2  ---------->DOF2     >>>>>>>>>TBF1 ------At4g35610------>NtERF2                 --------->ANAC46--------->DAG2 >>>>>>>>>TBF1   tctcactctctccggcgccgacaagaagtatagaatagcgaatggaccacgagagagagagagaaaggtaggtgaagaagaagaagaagactgagtcgat  7111800                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                              *TSS                                                            <------                        <---------ANAC58                                                <---------MYB52(1)                        <---------ANAC58                                               --------->TOE2(3)                   <---------GLK1(2)                                             <---------DAG2<-----                 <---------YAB1                                                  <----------DOF2  <--               <---------At4g35610      ---------->ID1                        <---------ALFIN1-------               --------->At4g35610 <----------DOF2                         <-----------GT1    -------            <---------At4g35610  <------------------------ANAC81         <---------GLK1(1)  <--------   gcgattggattttaagcagatgattctcgtgcttcttcttttgtcttcttccttctcttcgaaatgtttttttgtatttcccactttacccttagttagg  7111900                                                                                     <---------DEAR3(2)  --------->AHL20(1)                                                                <---------DREB2C(2) -MYB83                                                                            --------->DDF1 -->MYB111(2)                 <---------ANAC46                                    <-----------HVH21 -------->AtSPL3          <---------YAB1                                         <---------O2 -->MYB46(2)            <---------AHL20(2)                                       --------->O2 -->MYB59              <---------YAB1                                        <-----------HVH21 ---------AtSPL8     <---------ICU4                                         <------MYB83<-------TEIL -MYB46(1)       --------->AHL20(2)                                         <------MYB46(1) -----TEIL       <---------AHL20(2)                                        --------->MYB55(2) -->MYB111(1)   <---------AHL20(2)                                         <---------MYB46(3) -------->AtSPL8--------->AHL20(2)                                       <---------MYB52(1) -MYB52(1)    --------->GLK1(2)         --------->MYB52(2)              <-----------HVH21      <-----   tacatatattactgagaatttaatttttatttttgtgtagtttagttggattgcaaattttaaaaatttggacccgttgggtcatgtcggtccatagctt  7112000                                                                                         --------->AtMYB61                                                                                        --------->MYB46(3)                                                                                        <---------MYB55(2)                                                                                       -------->P                                                                                   --------->ANAC58                                                                           <---------ANAC58                         <---------ANAC46    ---------->DOF2               <---------ANAC46             ----------->RAV1(1)         <---------ANAC46                  <---------ANAC58 <--------            --------->ANAC46             <---------ANAC55(2)   --------->ALFIN1    --------->ANAC58 -----DOF2--------->ANAC46          <---------ZAT6      <-----------------AGL3     --------->ANAC46   tgtgaagtttatccacaacatattgttatgtagaagttgtgttatgtgaaagatggtctctacaaatggggcaagtttcttgtctaagcaaccactcatc  7112100                                <---------ANAC58                         --------->ANAC58                                <---------ANAC58                         --------->ANAC46                               <---------STY1(2)                         --------->ANAC58                               --------->STY1(2)                       --------->ANAC46                          --------->ARR11(3)                           <---------ALFIN1         <----                          <---------ARR11(3)                         <---------ALFIN1           -----                         <---------ALFIN1                           <---------REM1(2)          ------                 --------->ALFIN1            ------>ZmHOX2a(1)     ------>ZmHOX2a(1)   --------->TOE2(3) -ATHB12         <-----------RAV1(1) <----------DOF2           --------->ARR14(2)    ------->TEIL   tatgcaattcatatgaaatgtgtggccacatcttgctagctttcttcctacttccccttcttcccaatcctacacaccccaaaaatgaacattagaaata  7112200                       --------->AHL20(1)                       <---------AHL20(1)                       --------->AHL20(2)                    --------->YAB1                     --------->AHL20(2)                   <---------YAB1        --------->HSFB2a(2)            ----------->RAV1(2)                 --------->YAB1          <---------HSFB2a(2)            --------->At4g35610             <---------YAB1              ------>ZmHOX2a(1) <-----------GT1 <---------YAB1 <---------YAB1    <---------YAB1       <---------AHL20(1)              --------->ANAC58 -----AHL20(1)<--------HAHB4   --------->GLK1(2)       <---------AHL20(2)     --------->ANAC58 ---->AHL20(1)<---------ICU4<---------AHL20(2)         --------->AHL20(1)     --------->ANAC58      < --->AHL20(2)--------->ICU4 --------->AHL20(2)     <---------YAB1  <-----------GT1     --------->ANAC58   tatatgatttaagtcattattatcatatattaaaatctgattcctagatgattctaattaattacatttttatcacctgtaagcaaatcgagcaactcga  7112300  Previous    Next  AGI:  At3g20390.1    Description:  endoribonuclease L-PSP family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO38958.1); contains InterPro domain YjgF-like protein (InterPro:IPR006056); contains InterPro domain Endoribonuclease L-PSP (InterPro:IPR006175); contains InterPro domain Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813) Range:  from: 7109955    to: 7111830    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g20395.1    Description:  protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G66070.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G74410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38957.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7111954    to: 7113876    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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