Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  ---                                  <---------ANAC46                                                ---                                 <---------LBD16                                                  <--                           --------->YAB1                                                         ---                      --------->ARR11(3)                         --------->GLK1(2)                <--                      <---------GLK1(2)                         <---------GLK1(2)                ====                      <---------ARR11(3)                      ----------->ARR10                  <---                      <---------ARR14(2)                --------->HSFB2a(2)            <----------ID1                      --------->ARR14(2)                <---------HSFB2a(2)  <---------At4g35610-----                    ----------->ARR10               ------>ZmHOX2a(2)        --------->At4g35610<----   tcaattgtttgaaaacaaatcgaagatactcatatttcggatgatgtctattgatcgtccagaatagattctaaacctctgcttccaatacgacgagaag  7103400          --------->ARR14(2)          <---------ARR14(2)      <-----------------AGL1           --------->LBD16      <------ZmHOX2a(2)               --------->HSFB2a(2)                                     ------- ----->ZmHOX2a(2)                  --------->ARR11(3)                                        -------- --------GLK1(1)               --------->YAB1                                             <---------ANAC58 -----ZmHOX2a(2)              <---------ATHB12                                            <---------ANAC58 ------->GLK1(1)             ------>MYB83                                                ------------ ------>ARR14(3)             ------>MYB46(1)                                             ------------ ------>ARR11(3)            --------->MYB52(1)                                           <----------- -------ARR11(3)           --------->AtMYB61                                             <----------- ------>ARR14(2)    --------->TOE1(2)------>ZmHOX2a(2)                               --------->AHL20(2) -------ARR14(2)  --------------->AtSPL3                                             <---------AHL20(2) ============HOX2a_HOX2a  --------->MYB46(3)      <-----------RAV1(1)               --------->AHL20(2) ---ZmHOX2a(1)    <---------------AtSPL3    <--------ATHB1               --------->ARR11(3)<---------SPL7 ---->HSFC1(2)    --------------->AtSPL8--------->LBD16                  <---------ARR11(3)--------->TOE1(2) -----HSFC1(2)    <-----------------------TaNAC69(2)         ---------->DOF2   <----------DOF2-------   gatctccgatcgaatatggaaacgtactaccaacgatgatcccgaataattcatgttgcaccacaaagcatgaaacatcttctttatttaattcgtacga  7103500                                                                             --------->At4g35610 -->ANAC58                                                           xxxxxxxxxxxxxxxx>smallRNA(i) ->SPL7                                  ----------->GT1             xxxxxxxxxxxxxxxxx>smallRNA(si3) --->AtSPL3                           <---------At4g35610            xxxxxxxxxxxxxxxx>smallRNA(le3) --->AtSPL8                     <----------DOF2                      <xxxxxxxxxxxxxxxxxxsmallRNA(le3) ----AtSPL8            ------------>CBF ----------->GT1             ---------->DOF2 ----AtSPL3<---------ZAT6    <-----------GT1                ----------->GT1  <---------At4g35610  <-- -->ANAC58 ----------->HVH21--------->AHL20(2)           ---------->DOF2<------------CBF <-----------RAV1(1)   caacattctattagtgacagaaaacaacaattaactttgtagctgttaaaaatactggtaaaagataaaaaaaagattgagccgagtttatctgttgtat  7103600                                                                        ------>ZmHOX2a(1)                                                                        --------->At4g35610                                                                 <---------GLK1(2)       --------->HSFB2a(2)                                                              --------->ANAC55(2) --------->AHL20(2)                                                              <---------ANAC55(2) <---------AHL20(1)                                <---------CCA1(1)            <-------TEIL         <--------ATHB1                                <---------RVE1(1)            <---------LBD16      --------->YAB1                               <---------ARR11(3)           --------->CCA1(2)     <---------ICU4                         --------->ANAC58                   --------->ARR14(1)    --------->ATHB51                         --------->ANAC46                  --------->ARR11(1)    <---------ATHB51                  <-------TEIL <---------AHL20(1)          <---------ARR14(2)    <---------ATHB12                 --------->CCA1(2)    <-----------GT1      --------->ARR14(2)    --------->ICU4          <---------YAB1 --------->ANAC58      --------->ANAC55(2)  --------->KAN4(2)    <---------HSFB2a(2)      <----------DOF2 <-------TEIL  <---------AHL20(2)    --------->CCA1(2)    --------->YAB1 ---------GT1<---------WOX13(1)--------->ARR11(3)        ----------->ARR10   ------------>CBF   -----   atactattctttttgatagatacatacacccaagatattttatcttgacatgtgatgaagagatacggattatcctctgaacaataattttctaaaaaaa  7103700                                                --------->YAB1                                          <---------------AGL15                                          ----------------->AG                                          --------------->AGL15          <---------ANAC58                                         ----------------->AGL1          <---------ANAC58                                        ---------->ID1     --------->GLK1(2)            --------->YAB1          <----------DOF2       <---------ARR14(2) --------->ANAC58                   <---------DAG2        --------->ARR14(2)                   ------ --------->ANAC58                  <---------DAG2         <---------GLK1(2)        <---------ZAT6 ----->DOF2<---------YAB1 ----------->TBP----------------->AGL2          <---------ANAC46      <-----   aagaagcaaatttttgataacttaacttataaatccacctttttccctaattagaagatggattctggctgattttcttggattagtgttagacagggat  7103800                                        ----------->GT1             <----------DOF2                <-                                   <---------TOE2(3)            ------->GAMYB                     ---                                   --------->ANAC58          <-----------GT1           <---------TOE2(3)           ------------>CBF        --------->ANAC58  --------->ANAC58       <----------DOF2       ---       --------->TOE2(3)      --------->WOX13(1)     --------->ANAC46     ---------->ID1         ---- --->ARR14(2)             --------->WOX13(1)       --------->MYB52(1)    <-----------GT1<---------YAB1 ----ARR14(2)     --------->At4g35610 ---------->DOF2--------->ANAC58<------------------------ANAC81   actactatttcttaacaatgagatgaggcaatctatcaaggaaagtaaaaaaaaaacgaaacttaaccctctttttttctttttttttttatgttagacc  7103900                                                 <---------AHL20(2)                                                <---------AHL20(2)                                             <---------AHL20(2)                   --------->LBD16           --------->AHL20(2)                  --------->ANAC55(2)      <---------AHL20(2)                  ----------->GT1        <---------AHL20(2)                  <---------ANAC55(2)   <---------AHL20(1)           <-----------GT1                - --------ATHB12   <---------ANAC58      --------->AHL20(1)         <---------ICU4           --------- --->MYB83        <---------ANAC58     <---------AHL20(2)     --------->AHL20(2)          ---------->DOF2 --->MYB46(1) <---------GLK1(2)    --------->AHL20(2)   --------->AHL20(2)            ---------->DOF2 ----->WOX13(1)--------->GLK1(2) --------->AHL20(2)     <---------AHL20(2)       --------->YAB1     <   aatcacttcttgaaaagattccgtaactagacgatttttatatatatttttttattttttaatttttaatatttccacttcaaatataaaaagaaagtat  7104000                 --------->ICU4                 <---------YAB1               --------->YAB1                                                      --------->TOE1(3)               <---------ICU4                                                   <-----------GT1      <---------YAB1                                                      <----------ID1 -------->AHL20(2)--------->YAB1                     --------->ARR11(3)   ----------->GT1 -->GT1       --------->ICU4<---------YAB1     --------->AHL20(2)       ---------->DOF2 ---------AHL20(2)--------->ATHB12    ----------->GT1>>>>>>>>>>GT-1----------->GT1 --------->TOE2(3)   atttatttgttatagaattatgattagaatatgaatacaaatgtaaaaaaaaaatgatatagaattctatagaaaaaagaaaaaaccttataagctagtc  7104100                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                     xxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                                                   <------NtERF2 xxxx                                                                                   xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                  <-------GAMYB    xxxxxxxxxxxxxxxxxx                                                                 --------->MYB55(2)xxxxxxxxxxxxxxxxxx                                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                 <---------DEAR3(2)xxxxxxxxxxxxxxxxxx                                                                <---------DREB2C(2)--------->MYB46(3)                                                                <---------RAP2.6(2)xxxxxxxxxxxxxxxxxx                                                                <---------ANAC58   xxxxxxxxxxxxxxxxxx                                                          <---------YAB1           xxxxxxxxxxxxxxxxxx                                                   --------->YAB1<---------MYB46(3)xxxxxxxxxxxxxxxxxx                          --------->AHL20(2)      <---------YAB1<---------ANAC46   xxxxxxxxxxxxxxxxxx                          --------->YAB1         --------->ARR11(3) xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               <---------AHL20(1)                <---------ARR11(3)--------->ALFIN1xxxxxxxxxxxxxxxx>smallRNA(se3)               --------->AHL20(2)               --------->YAB1  <---------DEAR3(1) xxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->AHL20(1)              <---------YAB1   <---------ANAC58  ------>NtERF2<-----               <---------AHL20(2)       --------->YAB1  xxxxxxxxxxxxxxxx>smallRNA(s)<---------ALFIN1              --------->AHL20(2)       <---------YAB1   xxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxx   ataccatttcatttcattatattgacaattaaaaaaaactgatcatactatgatcatagtatgatggcggttgagcaagtatgcccccatcgtctagtgg  7104200                                                            --------->ANAC58                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                        xxxxxxxxxxxxxxxx>smallRNA(se3)                                                        xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                        xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            <----------DOF2                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxx>smallRNA(le3)                   xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              --------->ZAT18     xxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <---------ZAT18     xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <---------------AtSPL8     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <------MYB46(1)     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <------MYB83    xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <--------P--------->ANAC46  <------ZmHOX2a(1)                  xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxx>smallRNA(le3)         xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(s) >smallRNA(s)                   xxxxxxxxxxxxxxxx>smallRNA(s)--------->ANAC58 xxxxxxxxxxxx>smallRNA(s)      <---------ARR14(2) --------->ALFIN1 xx>smallRNA(s2)               --------->ARR14(2)<---------SPL7 xx>smallRNA(se3)        --------->ZAT2    <---------LBD16 xxxxxxxxxxxxxxxxxx>smallRNA(se3) xx>smallRNA(fl3)        <------NtERF2xxxxxxxxxxxxxxxx>smallRNA(s) xxx>smallRNA(si3)       --------->At4g35610<---------STY1(1) xxxx>smallRNA(se3)      <---------At4g35610--------->STY1(1) >smallRNA(se3)          <---------ZAT2xxxxxxxxxxxxxxxx>smallRNA(s)                       --------->DAG2 xxx>smallRNA(fl3)    <------NtERF2xxxxxxxxxxxxxxxx>smallRNA(i)                       --------->TOE2(3) xxxxxx>smallRNA(si3) --------->ATERF1(1) ----------->RAV1(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----MYB46(3)xxxxxxxxxxxxxxx>smallRNA(le3)<---------LBD16xxxxxxxxxxxxxxxx>smallRNA(se3)  ---------->DOF2 xxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(s) ---------->DOF2   <---------GLK1(2)   -   ttcaggacatctctctttcaaggaggcagcagggattcgacttcccctgggggtagggtactacgaaaggaagttgatcatggattatccataaagttag  7104300  Previous    Next  AGI:  At3g20362.1    Description:  unknown protein Range:  from: 7103823    to: 7104256    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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