Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC55(2)                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                              --------->ANAC55(1)                                              --------->TGA1a                                              <---------TGA1a                                              <---------O2                                              --------->O2                                    --------->ANAC58                                    <---------ANAC55(2)                                    --------->ANAC58                                    --------->ANAC55(2)                                   ------->TEIL                                   --------->SPL7                                   <-------TEIL                                 <------NtERF2                                  --------->SPL1(1)                      <---------GLK1(2)          --------->ARR14(2)     <---------SPL7                          --------->ARR14(2)          <---------GLK1(2)     <---------ANAC58                         <---------ARR14(2)         <------ZmHOX2a(1)      <---------ANAC46                  <----------DOF2      --------->HSFB2a(2)       <---------ANAC58             <---------GLK1(1) ------>NtERF2  <---------ANAC46             --------------->AtSPL3        --------->GLK1(1) --------->LBD16  --------->REM1(1)            <---------------AtSPL3       --------->ARR14(2)--------->LBD16 -------At4g35610              --------------->AtSPL8       <---------ARR14(2)<---------LBD16 ------>At4g35610            ------------------>SPL14      <------ZmHOX2a(1) <---------LBD16<------ZmHOX2a(2) -------ZAT2                 <-----------GT1  ===============================bZIP_DOF  <-----------GT1   tgctacgtctaggattcttgaagccttgtttttgccgtacgtaaacacacgtctcaagagaggattccctttgccgattcccggcgatttcacgatcaaa  7070800                                              --------->RAP2.6(3)                                             --------->ARR14(2)               --------->YAB1                <---------ARR14(2)               <---------AHL20(2)               --------->TOE2(3)            <---------GLK1(1)                --------->AHL20(2)              <---------YAB1            <-----------------AGL1              <---------YAB1       <---             <---------TOE2(3)          ----------------->AG             --------->ICU4         <----      <---------GLK1(2)                 ----------------->AGL1          --------->ANAC58        <----    <---------YAB1                     ------->TEIL                     --------->ANAC58        <----    --------->ICU4                 <---------------AtSPL3           --------->ANAC58            <----  ---------->DOF2          <----------DOF2  --------->GLK1(1)       --------->ANAC58    -------------   aacataaagattgtttatgttaatagtggcattttggtatgtaccgatatcggcactagcacaaaccagtaagcaagtattatatagcttcttagattgc  7070900      --------->ANAC58      --------->ANAC58           --------->ATHB51  --------->ANAC58               <---------ICU4  <---------ANAC55(2)           <---------YAB1  --------->ANAC58            --------->TOE1(3)  --------->ANAC55(2)         --------->TOE2(3)  --------->ANAC46            --------->YAB1                                                      <-- <-------TEIL           --------->YAB1                                                    <----------DOF2 ------->TEIL        --------->YAB1 --------->YAB1                                     ------>ZmHOX2a(2) ------------AtSPL3 <---------AHL20(2)                                                <---------GLK1(1) -----ANAC58       <---------AHL20(2)                                                 --------->GLK1(1) -----AtLEC2       --------->AHL20(2)                    <---------HSFB2a(1)          <------ZmHOX2a(2) -----ANAC58       <---------AHL20(1)        <-----------GT1                         <---------ARR14(3) -----ANAC46       --------->AHL20(1) <---------YAB1     --------->HSFB2a(1)         --------->ARR11(3) -------->WRI1    --------->YAB1--------->ICU4    <---------MYB52(1)                 <---------ARR11(3)   atgtacgtaagcctgaagaaatataatgacaaccataattgtgatttgaaccgtttggaacttcccctctaagaagcgttttgacgagatctctttattt  7071000                        <---------HSFB2a(1)                        --------->HSFB2a(1)                                                        --                      --------->ARR14(2)                                                       ------                   --------->HSFB2a(2)                                                        -------                   <---------HSFB2a(2)                                                        -------                  <---------LBD16                                           <---------MYB52(1)-------                --------->ARR11(3)               <----------DOF2 <------ZmHOX2a(1)       --------->ANAC58                <---------ARR14(2)            ------->TEIL     <---------TOE1(3)         --------->ANAC46 --------DOF2  <---------CCA1(2)        --------->AtMYB61      <---------TOE2(3)         --------->ANAC58   ctttggctacttgcattatatctggaacttccccccctaagaccaatgcatctttctgagaggttaaggaaaacttccattaggcaattgcaagacacgg  7071100       --------->AHL20(2)                                 <---------AHL20(2)       <---------AHL20(2)                                 <---------YAB1                            -   <--------ATHB1                                      <---------AHL20(1)                          *TSS   --------->ATHB12                                    <---------ARR11(3)                      ------  <---------ATHB12                                     --------->AHL20(1)                   ---------  --------->ICU4                                   --------->YAB1               ------------>CBF<---- ---------->ATHB5                                 <---------ATHB12     --------->ANAC58     <------ZmHOX2a(1) --->DEAR3(1)                                     <<<<<<<<<ARR2        --------->ANAC46    <--------- -->ANAC58                                      --------->WOX13(1)     --------->ANAC58    ---------- -->ANAC58          ----------->GT1 <---------ALFIN1   --------->AHL20(2)      ----------->RAV1(1)<-- -->ANAC46  <-----------GT1     <---------PCF2------------>CBF        ------->TEIL      ---------->DOF2   cccaatgatttatattacaggcctgttaaatatgggcccaacttcgtaaacaatcaaaatattattcatatgtacgcaaaacaacaatagaaaaggataa  7071200                                                    ===================HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                                --------->ARR14(3)                                                --------->ARR11(3)                                                <---------ARR14(3)                                                <---------GLK1(2)                                                <---------ARR11(3)                        =================================HOX2a_HOX2a                        <------ZmHOX2a(1)       <---------ARR14(2)  <---------YAB1        ================================HOX2a_HOX2a ---------->GT1      --------->HSFB2a(2)      ----------->ARR10                             <-------- --->AHL20(2)<---------CCA1(2)              ---------->DOF2                                 <-------- -->GT1     <---------AHL20(2)         ----------->GT1                                      <-------- -----AHL20(2)<---------ARR11(3)     ---------->DOF2------>ZmHOX2a(1)                   <---------At4g35610 -ID1      --------->YAB1         ----------->GT1<------ZmHOX2a(2)         <---------ARR11(3) ->GT1     --------->AHL20(2)    --------->DAG2 --------->ARR14(2)         --------->ARR11(3) ----------CBF--------->ARR11(3)---------->DOF2--------->RVE1(1)------>ZmHOX2a(2)    <---------At4g35610   aattgttattctattatatctctctaggacaaaaaaaagtaaagtcaaaagatcctctctcatcgatctctctctaacatctccgtcttctgcttcgtgt  7071300                                                       --------->ANAC46                                                      --------->TOE1(2)                                                      <---------LBD16           <----------DOF2                                                      ------->GAMYB --------->YAB1                                              <---------AHL20(2)<---------AHL20(2)                                              <---------YAB1    <---------AHL20(1)                                             <---------AHL20(2) --------->AHL20(1)                                           <---------YAB1       --------->AHL20(2)                                        ------>ZmHOX2a(1)      <---------AHL20(2) -ANAC58                       ------>ZmHOX2a(1)    -------->P --------->AHL20(2)  --------->YAB1 -ANAC46                <---------YAB1 --------->TOE2(3)--------->LBD16---------->DOF2        ------- -ANAC58<-----------RAV1(1)   --------->TOE2(3)    <-----------GT1  --------->AHL20(2)       <-------   aatttgggtattgttggctccctactctgattcctcaaattccttatttttattaacccgcgaaaataaattataaagagggctttcaaaattttgaacc  7071400                             <----------DOF2                             <---------DAG2                        ------>ZmHOX2a(1)                ===============HOX2a_HOX2a                ------>ZmHOX2a(2)               <---------GLK1(1)               --------->GLK1(1)               ================HOX2a_HOX2a               <------ZmHOX2a(2)              --------->ARR11(3)              <---------ARR14(2)              --------->ARR14(2)              --------->ARR14(3)                 <---------TOE2(3)              <---------ARR14(3)                 <---------TOE1(3)              <---------ARR11(3)           <---------ANAC46            <----------DOF2         ------ >TEIL       --------->GLK1(1)           <---------ANAC46     <---------CCA1(2)        <----------ID1 ----GT1     <---------GLK1(1)        <----------DOF2      ------>ZmHOX2a(1)      --------->CCA1(2)   tttctctaacaatggagatctccctccttccctttttcttctttcgcgtttaaggtttctcctcgtctcttctcttttcaatggatatagcgaccagtaa  7071500                                                             ----------->RAV1(2)                                                            ------>NtERF2                              <---------MYB46(3)            <---------ATERF1(1)  ----------->HVH21                             <--------P             <---------MYB52(1)       <-------MYC3                           <---------MYB46(3)  <---------ARR14(2)      --------->ANAC58                           --------->ATHB12    --------->ARR14(2)      --------->ANAC46                  --------->ANAC46           ----------->ARR10         --------->ANAC58               --------->ARR14(2)          <---------At4g35610        --------->DAG2        ------->TEIL      --------->ICU4------->GAMYB      --------->ANAC46  ------->MYC3     <---------ATHB12     <---------ATHB12 --------->At4g35610       ---------->DOF2      --------->At4g35610 ---->DOF2     <---------ARR14(2)    --------->MYB52(1)   <---------LBD16   --------->O2<------ZmHOX2a(1)   tgctccaatgaatcttgaatccgtcgcaatggttgatggcaacggagcagaaccggtgtctccgcctgcgaaaaagccacgttttgacgaggagatgaat  7071600                                                      --------->HSFC1(2)                                                      <---------HSFC1(2)                                                      <---------HSFB2a(1)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                 <------NtERF2                                               --------->ALFIN1  <-------GAMYB                                             <---------MYB46(3) <---------DEAR3(1)                                          <---------ANAC58      <---------ANAC46                                          <---------ANAC46    ------>NtERF2                                          <---------ANAC58   <---------DEAR3(1)      <------NtERF2                      <-------TEIL --------->HSFB2a(1)     --------->LBD16                   --------->ARR14(2)  <---------ATERF1(1)                <------MYB46(1)    <---------ANAC58                   <---------ARR14(2)  ------>NtERF2          <---------YAB1    <---------ANAC58                  <------ZmHOX2a(1)   ----------->HVH21  --------->ZAT2   <------MYB83    <---------ANAC46          <---------MYB52(1)<---------MYB46(3)           <---------At4g35610   <---------LBD16           <----------DOF2--------->ALFIN1--------->SPL7   <---------ZAT2  -------- --------->ALFIN1            <-----------HVH21 <---------ANAC46<------NtERF2 --------->At4g35610   agagtggcggagattgttctggttctatcggcgttagggaggatgcgtggtggggaaactccgacggcgttggaactcgagctgatgtttgaagctaggt  7071700  Previous    Next  AGI:  At3g20270.1    Description:  lipid-binding serum glycoprotein family protein. Identical to Putative BPI/LBP family protein At3g20270 precursor [Arabidopsis Thaliana] (GB:Q8VYC2;GB:Q9LTR5); similar to lipid-binding serum glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G04970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24091.1); contains InterPro domain Lipid-binding serum glycoprotein; (InterPro:IPR001124); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 7067065    to: 7070952    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g20280.1    Description:  PHD finger family protein. Identical to PHD finger protein At3g20280 [Arabidopsis Thaliana] (GB:Q5PNS0;GB:Q9LTR5); similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT1G50620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38890.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 7071199    to: 7074647    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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