Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------------->AGL15                                                  <---------------AGL15                                                 <-----------------AGL1                                                 <-----------------AG                                            --------->GLK1(2)                                            <---------ARR11(3)                                            --------->ARR11(3)                 --------->YAB1            --------->RVE1(1)        --------->ARR11(3)           ----------->GT1                       <---------AHL20(2)        --------->GLK1(2)         <---------AHL20(2)                       --------->AHL20(2)    --------->AtMYB61            --------->AHL20(2)            ----------->GT1 ---DOF2<---------ARR11(3)       <---------AHL20(2)          ---------->DOF2            <---------AtLEC2   attccaccaaaatctacagacataatactttgtaattttatgtaaaaatcttcaaaatttgggaaaagaaaaatcatttaaaatcaatttgcattaactg  7052000                                                                     ----------->GT1                                                               <------ZmHOX2a(1)                                                              <----------ID1                                                         --------->YAB1                                                        <---------AHL20(2)                                                        <---------YAB1                                                       --------->AHL20(1)                                                       <---------AHL20(1)                    ------->TEIL               <---------AtMYB61                       --------->AHL20(2)                 <---------ANAC55(2)             --------->ALFIN1                          <---------AHL20(2)                 --------->ANAC55(2)          --------->DAG2   --------->AHL20(2)    ----------->GT1 ---------->DOF2         <---------TOE2(3) <---------AHL20(2)    <---------ANAC46  <---------MYB46(3)  <---------TOE2(3)     ----------->GT1   gatttatttccaaaggtgtggtattgtgtttatatatgtggagttgttggctagtaatataataaggaaaagagtgaaacatatgtagtataacgtattt  7052100                                                              <---------ZAT2                                                         --------->YAB1                                                <---------WOX13(1)                                              --------->ATHB12--------->ZAT2                                             <---------AHL20(2)                                ------                               <---------AHL20(2)       <---------YAB1                         <-----                  <---------TOE2(3)          --------->ICU4  --------->GLK1(2)                 ------                --------->ICU4 --------->AHL20(2)     --------->YAB1    ---------->DOF2       -------      <-----------GT1 ------->TEIL           --------->AHL20(2)   <-----------HVH21    <----------ID1   ctagtttttttctctgtattaatgaatcactaattaagtagtatgcattaattgaattatcagaagctggtcacaaaagtctaccaaaaaaaacaaaaaa  7052200                                                                                     <-------GAMYB                       --------->YAB1                                 --------->YAB1----------->GT1     <---------At4g35610                  --------->AHL20(2)       --------->WOX13(1)--------->At5g28300     --------->At4g35610            ----------->GT1             --------->ANAC58--------->ANAC58 <-----------HVH21  <---------ICU4  <----------ID1              --------->ANAC58--------->ANAC58 ---- --->AHL20(2)       --------->YAB1 ----------->GT1            ---------->DOF2   --------->ANAC46 ---- ----AHL20(2)      --------->ICU4--------->DAG2        --------->ANAC58 <---------TOE2(3)        ---- --->AHL20(1) --------->YAB1    ---------->DOF2        --------->ANAC58<-----------GT1<---------MYB52(1) -->AHL20(2) ----------->GT1 --------->AHL20(2)    --------->GLK1(2) <---------MYB52(2)     ---------   attggtcagaagaaaatgaaaataatgagaataaaaaagggaaaaaaaataagaagctagcaaacaaagcaattaacatttcaaggcagttaattcatca  7052300                     <-----------HVH21      <---------REM1(2)         <---------------AGL15          <---------ANAC46       <----------DOF2                      <---------ATHB12       <----------DOF2       <---------MYB52(1)    <---------CCA1(2)  --------------->AGL15      <---------ANAC58     <---------ANAC58 <---------ZAT14     --------->ANAC58     <-------TEIL    <-----------TGA1  <---------ANAC58      ------------>CBF ----->AtLEC2       --------->ANAC46   <---------ANAC46     --------->ANAC58         --------->ARR14(2) ----->ANAC58       --------->bZIP60(2)<---------ANAC58     --------->ANAC58         <---------ARR14(2) ----->ANAC58 ----------->HVH21  <---------DAG2--------->ANAC46 --------->ANAC58     <---------GLK1(2) >YAB1<---------ANAC58     <---------ANAC58 --------->ZAT14 --------->ANAC46<---------HSFB2a(2)   tgcaaggtgcttatgtgtgacaacgtcatgcgttactttttgcgtctacactcatctctctaacgcaatccactaattctggtaatggattctgctattt  7052400                           <---------YAB1                          *TSS                         --------->YAB1                      <-------TEIL        <---------GLK1(2)<---------ICU4                 --------->YAB1   ------>MYB46(1)      <---------ATHB12              --------->GLK1(2)   ------>MYB83 <---------CCA1(2)                    --------->YAB1  --------->ANAC58    --------->WOX13(1)           --------->ANAC58                            ------  --------->ANAC58  ------------>CBF               --------->ANAC58--------->CCA1(2)         <-------   agaccagccagtttcttcgtctctcaatcatcatccaaaaacattcttctcacaagaatcagattcaagatagaagtttttcaaacaatgtctagtcctc  7052500                                                         --------->LBD16                                               --------->At4g35610                                               --------->ZAT2                                               <---------At4g35610                                               ----------->RAV1(2)                                             <-----------RAV1(2)           <---------GLK1(2)          <-----------ARR10 --------->ANAC58           --------->YAB1           --------->ARR14(2)      <---------ANAC58     --------->ANAC58          --------->ICU4     <----------DOF2 <-----------GT1 <---------CCA1(2)  --------->ANAC46        --------->YAB1 >ZmHOX2a(1)--------->GLK1(2)      <---------ANAC58    <---------LBD16          <---------ICU4   <--- --ZAT18   <---------ARR14(2)  <----------DOF2 <---------ZAT2                --------->YAB1------->TEIL   ttggtcactttcagattcttgtttttcttcatgctttgcttatcttctcagctgagtcccgcaaaacccaattgctgaacgataatgatgttgaatctag  7052600                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                            <-------GAMYB                                                          <-----------GT1  ----------->GT1                                                     --------->AHL20(2)    --------->MYB111(2)                                                <---------ATHB12 --------->ANAC58                                           <------ZmHOX2a(2)     --------->ANAC46                                      <---------ANAC46   <---------YAB1    <---------MYB46(3)       -          ---------->DOF2             <---------ANAC58 --------->YAB1     <--------P              <--       --------->ZAT18                <---------ANAC58<---------YAB1  <-----------RAV1(2)   ------->TEIL -------ID1 --------->DAG2       --------->MYB52(2)------->TEIL  --------->ANAC58    <---------YAB1>>   cgacaagagtgcaaaaggcacacgatgggctgttttagttgctggatcaaatgaatattataactacaggcatcaggttgttaaattatgtttgaacgtt  7052700                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                       <---------CCA1(2)                                                                                     --------->ANAC55(2)                                                                                    ------->MYC3                                                   ------->GAMYB<-----------GT1     <-------MYC3                                                   --------->DREB2C(2)             --------->ANAC58                        --------->ANAC58           ----------->HVH21               --------->ANAC58 -------->YAB1          --------->ANAC46          --------->MYB46(3)               --------->O2 ---------GT1           --------->ANAC58          --------->DEAR3(2)          --------->ANAC46      - >>>>>>>MYB98  ---------->DOF2     <---------AtLEC2--------->DEAR3(1)  ----------->HVH21<---------ARR14(2)   taacataacaaaaaaaaaaaaggtccaagcgagatttgtatgaactaaatcgaccgacgttttatttcacaggctgacatatgccacgcgtatcagatac  7052800         <-------GAMYB        <---------MYB46(3)        ----------->GT1       <---------DEAR3(1)                                                ------>ZmHOX2a(1)       <---------RAP2.6(2)                                           <---------ARR14(2)         <----    --------->DAG2                                                   --------->ARR14(2)     ---------   ---------->DOF2                                            ------>ZmHOX2a(1)           <---------YAB1  ---------->DOF2                               --------->ARR11(3)   --------->GLK1(2)  --------->YAB1 --GLK1(2)                  --------->ATHB12  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <--------HAHB4 ->ARR14(2)                 <---------ICU4    <---------YAB1  <---------HSFB2a(2)      <---------YAB1 --ARR14(2)   ---------->DOF2    <---------ANAC46     <---------ANAC46  --------->TOE1(2)--------->TOE2(3) -------->LBD16            <---------YAB1   --------->YAB1    <---------LBD16          --------->ICU4   tccgaaaaggcggtttaaaagatgaaaacatcattgtgtttatgtatgatgatatcgcgttttcctcggagaatcctaggcctggagttatcattaataa  7052900  Previous    Next  AGI:  At3g20210.1    Description:  DELTA-VPE (delta vacuolar processing enzyme); cysteine-type endopeptidase. similar to GAMMA-VPE (Vacuolar processing enzyme gamma), cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT4G32940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70603.1); contains InterPro domain Peptidase C13, legumain; (InterPro:IPR001096) Range:  from: 7052426    to: 7054749    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version