Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->ATHB12                <----------DOF2                                  <--------ATHB1       <---------ICU4                                  <---------ICU4    --------->ANAC55(2)                                  --------->YAB1----------->RAV1(1)       <---------MYB46(3)                                 <---------ATHB12   <---------ANAC55(2) <-------GAMYB        ----------->GT1          --------->ICU4 ------>NtERF2<----------DOF2 <---------WOX13(1)  --------->CCA1(2) <------ZmHOX2a(1)       --------->DEAR3(1)   <---------ANAC58 ->ALFIN1    ---------->DOF2     <---------YAB1--------->ANAC46  <---------ANAC58          <---------   gaagatagagaggttaaaagaaggagagtttgacaatgatttcgcatcgacgacacataatgtctttgcttctcggttgatagacgacgatgactttggt  7047200                                                                                                  <--                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             --------                                                ---------->DOF2                              <-------                  ------->TEIL      --------->LBD16                                        <---------ARR11(3)               <---------YAB1      --------->HSFB2a(2)                                     --------->ARR11(3)             --------->YAB1        <---------HSFB2a(2)               <----------DOF2---------->DOF2 -DOF2 ------->TEIL               <---------LBD16--------->DAG2    --------->ICU4--------->AHL20(2)   ttcgccatgaatcgatgatgaaactgatcagtcttctccagaacaatggaaaaagctaaacaatttgtaatctttgatgccaaataaaaagaagaacttt  7047300                    <----------DOF2                    <---------DAG2       <----------DOF2 <-----------GT1 --------DOF2    ------->TEIL ----DOF2        <-----------GT1 ->HSFC1(2)   <---------ANAC55(2) --HSFB2a(1)  ----------->GT1  <---------YAB1   <---------ANAC46                              <------ ->HSFB2a(1)  --------->ANAC55(2)      <---------ICU4   --------->YAB1                      <-------- --HSFC1(2)  --------------->AtSPL8   <---------ATHB12  ----------->GT1                 <-----------GT1   ctttttcttctttgttatgtaactttttccattcttataaatcattctcttcgtgtaattgtaaatccattttgcagagttttgaaaattttactcattt  7047400                                         ------->TEIL                                      --------->ICU4                                --------->DAG2          <---------bZIP60(1)                               ---------->DOF2          --------->bZIP60(1)                          --------->ANAC58           <---------ZAT6                          --------->ANAC46      <---------ANAC58       <------ZmHOX2a(2) ---CCA1(2)               --------->ANAC58      <---------ANAC58<---------ANAC58 -ICU4                    --------->AtLEC2    --------->AtLEC2  <---------ANAC58         <-----------   cttattttcaagtacaagaatcaaatccatgcaaaaagtaatgaatccatgcgtagtgacaacatagcttgagatcgaaatactcaaattgcattgtatg  7047500                                                <------------CBF                                            --------->HSFB2a(2)                                   <----------DOF2                                   <---------DAG2                                         <---------ICU4    ---------->DOF2     --------->DAG2    --------->HSFB2a(2)                  <---------LBD16      < -CBF                  ---------->DOF2    <---------HSFB2a(2)       <------------CBF   *TSS    <-----   tggatgaaaagtttccaacttcaaaaaaagtttggaacttttttctcgagaattgtattttagggctaaaaattgaatttttggggataaactaattact  7047600               --------->ARR14(2)              <------NtERF2            <---------RAP2.6(2)       --------->ARR14(2)       <---------ARR14(2)            <---------At4g35610   <------NtERF2           <---------ANAC46  --------->LBD16      --------->At4g35610          ---------->DOF2                        <--------- <---------ANAC46      <---------At4g35610  ---------->DOF2                           <---------YAB1 ---------LBD16<---------ARR14(2)  <-----------RAV1(2)                           ----------->GT1 ----YAB1  <---------LBD16<---------LBD16 <---------YAB1                   --------->GLK1(2)   atggcggagaattcgcggctacgagagctacggagacacagatgatgaaagagagaaagagagagagagagagagagaatgtgaggttaaaattatccat  7047700                  <---------ATHB12                                                  <---------ARR14(2)               <---------ALFIN1                                 --------------->AGL15              --------->MYB46(3)                               ----------------->AGL2<---------GLK1(1)           <---------ZAT18                         <---------GLK1(1)                --------->ARR14(2)           --------->ZAT18                         --------->GLK1(1)            <---------At4g35610           --------->ZAT14                        <---------ARR14(2)     <------ZmHOX2a(1)         <-           <---------ZAT14                       <------ZmHOX2a(1)     <---------TOE2(3) <----------DOF2 --GT1<---------ZAT14                      ---------->DOF2     ----------------->AGL3--------->GLK1(1)   tgttgttcttcagtgcaccactgaatcgaagttttctaatttggagaaagaggatttctcaaaacccctaatttaggaagaccgcagatttctttagtat  7047800                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                          --------->LBD16                                                         <---------LBD16              <---------HSFB2a(2)                        <---------ANAC58              --------->LBD16                    --------->TOE2(3)              --------->HSFB2a(2)                --------->TOE1(3)        --------->GLK1(2)                       ----------->GT1   <-----------GT1       <---------GLK1(2)                 <--------P      <---------ANAC46     ----------->ARR10                 ----------->GT1   <---------ANAC58 --------TOE2(3)           ----------->GT1<-------TEIL  <---------LBD16   tgagaatgagattctccgagaagatggattagtgaatcgagaggttgatatcgttaaatgcggggattttgcaatctagggttcttaagcattgtaatcg  7047900                                  --------->ANAC58                                  --------->ANAC58                                 <-------TEIL                             --------------->AtSPL3                             --------->DAG2    --------->MYB52(2)                             <---------------AtSPL8                             <---------------AtSPL3                --------->At4g35610     <---------LBD16                       --------->ANAC58                <---------ZAT2 --------->TOE1(2)                              --------->ANAC58          --------->DAG2   ---------->DOF2   <--------P                   <---------TOE2(3)        ---------->DOF2 >>>>>>>>>TBF1<---------ARR14(2)                 ---------->DOF2             <   atgaaggctcaaaagggaagctcgaagaagaaaggtacgaattctgggttagtcgctgtagcagtggataacaataaaggaagccaacatgctctcaaat  7048000                                                      ------>ZmHOX2a(1)                                                      <---------MYB52(1)               ---------->ID1                        --------->TOE2(3)  <---------At4g35610                                --------->TOE1(3)  <---------ZAT2        <------ZmHOX2a(1)          <---------YAB1  --------->At4g35610  <----------ID1     ------>ZmHOX2a(1)                      <---------At4g35610 ---------DEAR3(1)  ---------->DOF2    ------>ZmHOX2a(1)         ------>ZmHOX2a(1)    <---------YAB1   gggctgctgatcatcttgtctctaaaggacaaaccattatcctcctccatgttatccttaggtcatcctctgattcaggtctgagcttatgacaaaacct  7048100  Previous    Next  AGI:  At3g20190.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G50610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41709.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 7044949    to: 7047396    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g20200.1    Description:  protein kinase family protein. similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G16760.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G78940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69465.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41708.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43975.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein Range:  from: 7047587    to: 7051348    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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