Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ------>NtERF2                                                                             --------->LBD16                                 <---------ANAC58                           <---------RAP2.6(2)                                 <---------ANAC55(2)                       <---------LBD16                                 <---------ANAC58                       <----------DOF2                                 --------->ANAC55(2)                   <---------DAG2      <---------            <-------MYC3  --------->HSFB2a(2)                    <-----------GT1         --------->MYB46(3)      <-----------GT1     <---------HSFC1(1)          --------->ZAT6 ------->TEIL       ------------>CBF --------->GT1            <---------HSFB2a(2)       <-----------GT1  -------->P <----------DOF2   --- --TOE2(3)  ------->MYC3  --------->HSFC1(1)    --------->AHL20(2)  <-----------GT1    ----------->RAV1(1)   ttagtgaattaccacatgtgatgcaattctagaatacgtggtaacagagattatttacactatgttttatctacctttccggctttgagcaacaattgca  7014100                     <---------HSFB2a(2)                     <---------------AGL15                     --------->HSFB2a(2)                    <-----------------AGL1                    ----------------->AGL1                    <-----------------AGL2                     <----------DOF2                     --                    ----------------->AG --------->AHL20(1) --------->ARR11(3)                     <-             <---------MYB52(1)          <---------AHL20(1) <---------ARR11(1)                     --     <---------ICU4 <-----------------AGL3                  <---------ARR11(3)                     <-     --------->YAB1 ----------------->AGL2             --------->GLK1(2) <---------AHL20(2)    ------    --------->ICU4  ----------------->AGL3     <---------TOE2(3)         --------->AHL20(2)  <-------  --------->YAB1<---------ANAC58         --------->AHL20(2)<---------CCA1(2)                 -------- ---CBF     <-------GAMYB               <---------CCA1(2)--------->YAB1*TSS       <---------ARR11(3) ------>MYB46(3)<---------ANAC58  <----------DOF2<------ZmHOX2a(1)  <---------YAB1--------->ARR11(3)   acaacgatgatgaccgttgagttccaaaactggttccttttcatatattaaggagagaatcatatctttgattattttattcgaaatcttatacaagctg  7014200     --------->O2     <---------ANAC55(2)     <---------ANAC58                                            --------->ANAC46     <---------ANAC46                                            --------->ANAC55(2)     <---------ANAC58                                            <---------ANAC55(2)     --------->ANAC55(2)                           --------->ANAC46             <---------ZAT2 ------->ZAT18                                    <---------TOE2(3) ------->TEIL--------->At4g35610 --------ZAT18                        --------->At4g35610        --------->TOE1(1) ------->ZAT14                        <---------At4g35610--------->AtMYB61      <---------At4g35610 --------ZAT14                     <---------MYB52(1)   --------->MYB46(3)      --------->ZAT2 --->ALFIN1                  --------->YAB1--------->ANAC58      --------->ANAC58   <---------AtLEC2< --ZAT2                     --------->ICU4 --------->ANAC58      --------->ANAC58  <-------TEIL     < ->ZAT2  <---------CCA1(2)  <---------ATHB12     >>>>>>>>>WRKY18--------------->AtSPL8        -------   gtgcactacgtgtctctcatgtctcaacccatgatcagttagcagacgcattgacgaaaccactaccacgtaccagttttcaagctgcatgttccaagat  7014300                                                            --------->KAN4(2)                                                           <---------KAN4(1)                                                     <----------DOF2                                                  --------->ARR11(3)                                                  <---------ARR11(1)                                       <------ZmHOX2a(1)   <---------ICU4                                     <---------TOE2(3)    <---------YAB1       <---------GLK1(1)  ----------->HVH21           <---------ANAC46    <---------ARR11(3)      <----------DOF2 ---------ANAC58              <---------ANAC58   <---------CCA1(2)  --------->YAB1 ---------ANAC58              ----------->GT1--------->GLK1(2)     <---------ATHB12     <---------YAB1 -->ATHB12                    <---------ANAC58 --------->YAB1    --------->WOX13(1)   <---------CCA1(2)   tggagtgacaagagtccctccatcttgagggagcgtattaaggagagaatcatatctttgattattccaatcatacctttgatttctcatatcattcgat  7014400                                                              --------->STY1(2)                                    <---------YAB1            --------->ZAT2           ------->TEIL          --------->GLK1(2)            <---------ZAT2      --------->YAB1            <---------GLK1(2)             <---------STY1(2)      <---------ICU4     ----------->GT1          ----------->GT1         ------>ZmHOX2a(1)     --------->ICU4     <---------------AtSPL8    --------->YAB1     <---------GLK1(1)             <-     <---------ATHB12   --------------->AtSPL8  <------------CBF     --------->GLK1(1)             --   tactacaatcatggacttatttatgtatagtacatattctgatttatgtctattgtaataccctagctagcatctcctctgtatataagttctcactctg  7014500           <---------GLK1(1)           --------->GLK1(1)          --------->ARR11(3)          <---------ARR11(3)      ---------->DOF2    --------->AHL20(2)    --------->YAB1                              <----------DOF2                              <------ZmHOX2a(1)    <---------AHL20(2)             --------->YAB1                                        ---------->DOF2 --------->YAB1             *TSS<---------CCA1(2)      <-----------GT1            --------->ANAC58 --------AHL20(2)   <---------HSFB2a(2)       <---------At4g35610 <-----------GT1 --------->ANAC58 ------->AHL20(2)   --------->HSFB2a(2)    ------>ZmHOX2a(1)<----------DOF2       --------->ANAC46   ttttaataaaaagatatcacttctacaaactcttatatcatactcctctgcttcttgtcactcttttgttactctctcttcttcaagaaacaaaaggact  7014600                               --------->ATHB12                              <------ZmHOX2a(2)                      <----------DOF2                     <---------ARR14(2)                   ------>NtERF2                   --------->LBD16                 <---------LBD16                                 --------->ZAT2         <---------ANAC58     <---------YAB1            <----------DOF2         <---------ANAC58     <---------ATHB12      ------->TEIL <---------At4g35610                -     <---------ANAC58<-----------ARR10          --------------->AtSPL8      <----------DOF2         -     <---------ANAC58--------->ARR14(2)     --------->ANAC46     --------->At4g35610           <-----   cacaagtgcttccgagccctccggctcttccgatcattggccatctccaccatgtactcttttcttcagcttacaagtctttacaaaaactctcatccaa  7014700                                                                                          -----------                                                                           ------>ZmHOX2a(2)                                                                           ==========================                      <---------ARR14(2)                                  <------ZmHOX2a(2)                      --------->ARR14(2)                                  ===========================                      <---------ARR11(3)                                 --------->AGP1 <---------WRKY18(1)                      <---------ARR11(1)                                 <---------ARR11(3)              --------->ARR11(3)                                         --------->ARR11(3)              <---------ARR11(3)                                         --------->ARR14(3)             <---------CCA1(2)                            <------NtERF2  <---------ARR14(3)           ------>ZmHOX2a(1)                           ------>NtERF2     --------->ARR14(2)     --------->AtMYB61------->TEIL   <---------ZAT14------>ZmHOX2a(1)    <---------ARR14(2)   ------->TEIL      <---------ARR14(1)     =====================================HOX2a_HOX2a      --- -------->ANAC58     <---------CCA1(2)      ------>ZmHOX2a(1)    <---------ANAC46      ----------->HVH21 -------->ANAC58    --------->LBD16  --------->ZAT14=============================HOX2a_HOX2a      <-- ----------AtSPL3 <---------LBD16 <---------ANAC46  ==============================HOX2a_HOX2a    <---   gtacggacctctcctatatctccgtatcttcaacttccctgtagtcctcgtctcctcggcctcagtggcatatgagatcttcaaggcccatgacctgagc  7014800                                                      <----------DOF2                                                  <---------ANAC58                                                  <---------ANAC58                                              ------>ZmHOX2a(2)                                            <---------ARR11(3)                                            --------->ARR11(3)              --------->HSFB2a(1)           --------->ARR14(2)   ------>ZmHOX2a(1)                        <---------ARR14(2)               <------ZmHOX2a(2) >RAV1(2)     --------->HSFC1(2)           <---------CCA1(2)                --------->ARR11(3) =========HOX2a_HOX2a                     ----------->ARR10        <---------DAG2   <---------TOE2(3) =========HOX2a_HOX2a                  <---------ANAC58           <------NtERF2     <---------TOE1(3) ------>GLK1(1)                        <---------ANAC58        <---------ZAT18  <---------YAB1 -------GLK1(1)       <---------ATHB12 <---------ANAC46     >>>>>>>GRF7     <---------ARR11(3)     -- --------ARR10<---------HSFB2a(1)      <---------AtLEC2  <-----------HVH21 <---------GLK1(1)       <-   atctcctctcgcgagaaccctccaatcgacgagtccctcttgcttggatcttccgtctttgtcagggccccttatggagatcattttaggtttatgaaga  7014900                                                       --------->AtLEC2                                                      --------->LBD16                                                     <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC46                                            <---------O2<---------ZAT14                            --------->ANAC58--------->O2--------->ZAT14                            --------->ANAC58--------->TGA1a                           ------->MYC3     <---------TGA1a                <----------DOF2                           ------->MYC2     ==================================bZIP_DOF                           <-------MYC3     ==================================bZIP_DOF               =======================================bZIP_DOF         <---------RAP2.6(2)      -----               <----------DOF2              <---------bZIP60(2)       <---------At4g35610      ------          ---------->DOF2  <-------MYC2  ----------->HVH21 <---------At4g35610 --------->HSFB2a(2)          ============================================bZIP_DOF  --------->At4g35610        <---------YAB1 ------->ARR11(3)       <---------ALFIN1<-----------------PIF3(1)  ---------->DOF2     <----------DOF2 --------ARR11(3)    <------ZmHOX2a(1)  <-----------HVH21  --------->At4g35610 <---------HSFB2a(2)   agctcttggttacaaagcttttaggaccacatgcactcgagaggtcacgaggcatccgtgcagatgagctagagcggctttacagaagtctttttgataa  7015000  Previous    Next  AGI:  At3g20085.1    Description:  transposable element gene. pseudogene, expressed protein Range:  from: 7014171    to: 7014346    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g20087.1    Description:  pseudogene, cytochrome P450, blastp match of 40% identity and 1.3e-29 P-value to GP|6118407|gb|AAF04115.1|AF188612_1|AF188612 flavone synthase II {Callistephus chinensis} Range:  from: 7014528    to: 7015290    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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