Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ATHB12                                                                                        <---------ICU4          --------->CCA1(2)                                                             --------->YAB1          <---------GLK1(1)               <---------MYB59                               <--------HAHB4         <---------ARR14(2)             -------->P                                     --------->ICU4 --------->ANAC46                       ------->TEIL                                   <---------ATHB12 --------->ANAC58             ------>MYB83--------->TOE2(3)                            <---------YAB1 --------->ANAC58             ------>MYB46(1)                                    --------->GLK1(2) ----->AtMYB61              <---------MYB59 ---------->DOF2                      <-----------ARR10 --ETT(2)--------->ARR14(2) --------->TOE2(3)            --------->MYB46(3)  <------NtERF2          -   cacaagaaatggatatgggtagagccaaaacctaatctaatctacctaaagaaacatgaacaactctataaacaatcgcagcgattctaatcattaagag  7004100                                           ----------->GT1                                          ----------->GT1                                          ------>ZmHOX2a(2)                                --------->KAN4(2)                               <---------HSFB2a(1)                               --------->HSFB2a(1)                               --------->KAN4(1)                               <----------TaMYB80                               <---------KAN4(1)                              <---------ARR14(2)                              <---------KAN4(2)                              ---------->TaMYB80        ---------->DOF2                       --------->ANAC58  <------ZmHOX2a(2)              <---------HSFB2a(2)                       --------->ANAC58 --------->ARR14(2)              --------->HSFB2a(2)             <---------------AGL15      <---------ARR14(2)          <----------DOF2             --------------->AGL15      <---------ARR11(3)         --------->TOE2(3)     <---------ETT(2)             <----------DOF2  --------->ARR14(2)  ----------->GT1  <---------DAG2        --------->ETT(2)            <-----------------AGL3 ----------------->AGL1       <-----------GT1   --------->ALFIN1 --------->DOF2--------->AHL20(2)  <-----------------AGL1 ----------->GT1       --------->ALFIN1   gctaaagactaattcctttaaatggacgcgagaatattccaagatcggaaaaatgtaaaaaagaaataacctttttagaacggagtggctatcgacggtc  7004200                                                 --------->RAP2.3(1)                                                <---------ATERF1(1)                                                --------->ABI4(1)                                               --------->RAP2.3(3)                                               --------->DEAR3(1)                                               --------->RAP2.3(2)                                               <---------ATERF1(2)                                              --------->RAP2.3(1)                                              --------->ORA47(2)                                              --------->ERF1                               <---------RAP2.6(2)--------->DEAR3(1)                              --------->ATERF1(1)--------->ATERF1(1)                              --------->At4g35610<---------LBD16                              <------NtERF2   --------->ATERF1(1)                              <---------At4g35610<------NtERF2                             <---------ATERF1(1)------>NtERF2                             ------>NtERF2    --------->DEAR4(2)                             <---------MYB46(3)--------->ATERF1(2)                             --------->MYB55(2)<---------DEAR3(1)                             --------->ABI4(2)<------NtERF2 <---------ANAC58                           <---------MYB52(1)<---------ATERF1(1)                          --------->LBD16    <---------ORA47(2)                         ------>ZmHOX2a(1)                        <---------LBD16--------->ZAT14      <---------ANAC58            <----------DOF2                    ----------->ARR10  <---------ZAT14  <---------ARR14(2)   --------->DEAR3(1)                  <----------DOF2     --------->ALFIN1  --------->ARR14(2)   ------->GAMYB                 <---------ANAC58   --------->LBD16 <------NtERF2           <------------AtMYB77                 <---------ANAC46  --------->ATERF1(2)  --------->KAN4(2)   --------->MYB46(3)              <---------WOX13(1) ------>NtERF2--------->RAP2.6(1)          <---------At5g28300         <---------At4g35610--------->ALFIN1 <---------RAP2.3(1) --------->ZAT14   --------->DEAR3(1)         --------->At4g35610<---------DEAR3(1)--------->RRTF1(1) --------->REM1(2)<------NtERF2       ========================HOX2a_HOX2a  <---------DEAR3(1)   <---------ZAT14 ------>NtERF2       <------ZmHOX2a(1)------>ZmHOX2a(2)  --------->ATERF1(1)   <---------ZAT18--------->DEAR3(1)    <------NtERF2<---------ANAC58--------->MYB52(1)--------->LBD16 ------->TEIL <---------ETT(2)   ttagtcggaggagcagattgctttgatccggtggctgccggtgtagtcgccgccggagtattccctgtgtacccattaaccgtcgccatcctttttcgcc  7004300                                --------->HSFC1(2)                      --------->YAB1                     <<<<<<<<<ARR1                     <<<<<<<<<ARR2                                        <-------TEIL                  --------->MYB46(3)                        --------->HSFB2a(2)                  <---------MYB52(2)                        <---------HSFB2a(2)   --------->ATHB12             --------->ANAC58   <---------HSFB2a(1)       <---------HSFB2a(2)   <---------KAN4(2)             --------->ANAC58   <---------HSFC1(2)        --------->HSFB2a(2)  --------->YAB1   >>>>>           ---------->DOF2      --------->HSFB2a(1)<---------DAG2    --------->YAB1  ================  <---------YAB1----------->RAV1(1)                <----------DOF2 --------->GLK1(2) ------>ZmHOX2a(2)   tcttctaattgaacaaagcaacaatcgtagtcgaaatttctgaaattgaaacgcttttttctcgagaagaatcagattcaagaatgatcgaaactgaaga  7004400                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                      <---------PCF2                                                                   --------->ALFIN1               ---                                                                 --------->O2               ---------                                                                 <---------ANAC58          --------->ANAC58                                                                 <---------ANAC46          --------->ANAC58                                                                 <---------bZIP60(2)       --------->ANAC46                                                  <----------DOF2<---------ANAC58         --------->SPL7                                                  =========================bZIP_DOF   <-------MYC3---  <------ZmHOX2a(1)                     <<<<<<<<<TBF1            --------->TGA1a      ------->MYC3--- >>>>TBF1       <---------ZAT6      <---------ARR11(3)           <---------TGA1a      <-------------- ========HOX2a_HOX2a  <---------ZAT6--------->ARR11(3)  *TSS     <---------O2         <--------------   agaaggagaagagagatagagatagagatagagagagagttcttcttctcttctttgagagagagagacgtgggtctgggttataaaacgtgtacgacac  7004500      <---------DEAR3(1)   ---------->DOF2  <---------HSFC1(2)     --------->AHL20(2)                        <---------TOE2(3) ------>ANAC58           --------->YAB1                            --------->MYB59 -->RAV1(1)         ------------>CBF                   ------->TEIL<---------TOE2(2) ------>ANAC58     --------->ANAC58      ---------->DOF2         <---------MYB52(1)        ------->TEIL ------>ANAC46     --------->ANAC58     ------>ZmHOX2a(1) --------->DOF5.7(2)   <----------DOF2 -AtSPL8         ---------->DOF2     <---------YAB1    --------->SPL7       <---------ANAC46 -AtSPL3<------NtERF2   ----------->TBP--------->TOE2(3) --------->TOE2(3)  <---------RAP2.6(2)    --   aagaaacgtcgtcgttttcaaaagcaataaaaaggaattatcctaaagcattttccgaacgttatcacttaggttatagcggctattttgatgcatttga  7004600                     --------->MYB52(1)                    ----------->HVH21                  <---------ANAC55(2)                  --------->ANAC55(2)              <---------DAG2            ------>MYB46(1)            -------->P <------------MYB.PH3(1)            ------>MYB83           --------->MYB55(1)          <---------MYB111(2)          <---------MYB111(1)               --------->YAB1          <---------MYB46(2)       <---------ICU4          <---------MYB59       <-----------GT1--------->AHL20(2)                  ----------->GT1         <---------At4g35610  --------->AHL20(2)<---------AHL20(2)----------->GT1  <---------ANAC55(2)       <-----------GT1--------->RAP2.6(3)  <---------ATHB12       <---------ANAC55(2) --------->GT1--------->TOE2(3)<---------AHL20(2)    ----------->GT1             --------->YAB1   attgaaaattcacctaccttatgtaacggctatttaatctttccaatgataaaatttgttacaaaaatatgtaaaatgttgaatcatgtaaaatgctcaa  7004700                                                             ------>ZmHOX2a(2)                                                             =================================HOX2a_HOX2a                                                            <------ZmHOX2a(2)                                                            ==================================HOX2a_HOX2a                                                           --------->ARR14(3)                                                           --------->AGP1                                                           <---------ARR14(3)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                                                           --------->ARR14(2)                                                           <---------AGP1                                                           <---------ARR14(2)<-------TEIL                                                      <---------ATHB12   <---------YAB1         <----                                                ====================HOX2a_HOX2a            --------->ANAC58                           <------ZmHOX2a(1)    <------ZmHOX2a(1) <-----------GT1          --------->ANAC58 =================================HOX2a_HOX2a   ===================HOX2a_HOX2a         <------ZmHOX2a(1) <------ZmHOX2a(2)<---------ETT(2)             ----------->GT1 ----------->GT1--------->YAB1   <-----   tagatcagagatttatgaggtctacaagaggagagggtatcgagagcaaaggataaatcaagatcttgttacaatatgattcatcacaaggacacactat  7004800                                                <---------ICU4                                                --------->YAB1                                               --------->ICU4                                               <---------YAB1                                       <                                               <---------ATHB12                                 ----- -----YAB1                                 <-------TEIL                                         ----- ----ARR11(3)      ---------->DOF2        --------->CCA1(2)    <----------DOF2          --------->ZAT6   ctttgaaactaattccaaagttaaagagagacacatttctatagatacaatgataacttccctagcttttcaaacctattgagaaacatcacactaagaa  7004900                                           --------->ANAC58                                           --------->ANAC46                                           --------->ANAC58                                  <-----------------------TaNAC69(2)                                 --------->At4g35610           --------->At4g35610                       --------->DAG2 ------->TEIL      --------->MYB46(3) -----------HVH21    --------->CCA1(2)<-------TEIL  <------ZmHOX2a(2)            --------->GLK1(2)--- ---->ANAC58 <---------ZAT14  ----------------------->TaNAC69(2)             <---------------------WRI1 ---->ANAC58 --------->ZAT14--------->ALFIN1 <---------SPL7    <---------At4g35610      ---------->DOF2   gccatcagagatgactacacaagataaggggagggagatgtacatacggtaccgatcaacaattgagcttaatgactcgagagactctttcaaagaagat  7005000  Previous    Next  AGI:  At3g20060.1    Description:  UBC19 (UBIQUITIN-CONJUGATING ENZYME19); ubiquitin-protein ligase. similar to UBC20 (UBIQUITIN-CONJUGATING ENZYME 20), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G50490.1); similar to unknown [Populus trichocarpa] (GB:ABK93364.1); similar to unknown [Populus trichocarpa] (GB:ABK94306.1); contains InterPro domain Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 7002823    to: 7004456    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g20070.1    Description:  TTN9 (TITAN9). similar to unnamed protein product [Vitis vinifera] (GB:CAO16820.1) Range:  from: 7004678    to: 7006924    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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