Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->At5g28300                                     <---------TOE1(3)                                     <---------TOE2(3)                                  <---------ARR14(2)                                  --------->ARR14(2)                                 <-------GAMYB                                --------->MYB55(2)                                <---------MYB46(3)                               <---------AtMYB61                               <---------ANAC46                    --------->ALFIN1                             <---------MYB46(3)                 <---------DEAR3(1)                            <---------DEAR3(1)                 <---------LBD16                            --------->ALFIN1                  <---------ANAC46                            <---------AtMYB61               <-----------HVH21                          --------->MYB55(2)               <-----------RAV1(1)        ------->TEIL                          <---------MYB46(3)            --------->ARR14(2)          <---------ZAT14                         <---------AtMYB61              <---------ARR14(2)          --------->ZAT14                         <---------DEAR3(1)             --------->GLK1(2)           --------->ZAT18                      <---------DEAR3(1)<--------P     <---------GLK1(1)            <---------ZAT18 <       <---------ARR14(2)--------->ALFIN1        <---------ZAT14<------NtERF2     <---------------AtSPL8   gtctctgcgcatacgagcatggagacggtggtggtggttacggtaagtgactgaagggaatctgtcgcggtggagaagacggagagtgtacttagaactg  6980000                                                          <-------GAMYB                                                        <---------AtMYB61                   <---------MYB46(3)           --------->At5g28300                 <-------GAMYB                <---------ANAC46                --------->ALFIN1              <---------DEAR3(1)              <---------ANAC58             ----------->TGA1          --------->CCA1(2)  <---------HSFB2a(2)<-----------HVH21   <---------At4g35610      <---------LBD16----------->HVH21----------->GT1        --------->GLK1(2) -------TEIL  <---------ANAC58   ----------->ARR10     <------ZmHOX2a(1)  --------->ATHB12   <------ZmHOX2a(1)   gattcatcggagaaatgggtgttgttgaaatcgggaagagttgcagtgacggtgagaggaggttgtaaaacgtcgatgatttgaaaatcagggaaggaga  6980100                                                                                  --------->ANAC58                                                                                  --------->ANAC58  <                                                                       ------->GAMYB          -------                                                                      --------->ANAC58        <------                                                                      --------->ANAC58  --------->ANAC58               --------->CCA1(2)                           --------------------->WRI1   --------->ANAC58      >>>>>>>>>TBF1                      >>>>>>>>>TBF1 <------ZmHOX2a(1)        ---------->DOF2     <   >>>>>>>>>TBF1                  ---------->DOF2    --------->ALFIN1 --------->ANAC46---------->DOF2   ttgaagaagaagaagagagatggagatggagatggagaaagaagaagaagagagggaggagcattgtttacaacgccagagccaaagccaaagccagtgt  6980200                                                                                            <--------                                                                                ---------->DOF2                                                                              ----------->HVH21   <--   --------->REM1(2)                                                  <---------ANAC58    <---------RVE1(1) ---------ANAC58                                                      <---------ANAC58    <---------CCA1(1) -->ALFIN1                                   <-----------HVH21    <---------ANAC58       --------->ARR11(3) ---ZAT6       <----------DOF2              --------->bZIP60(1)   <---------ANAC58       <---------ARR11(3) ---------ANAC58   <----------DOF2          <---------bZIP60(1)   <---------ANAC46     ----------->ARR10   gagcgtgaagactctctctttctttcttcttggattttgggttttgatgtcagactaagtttttggtgtcttgcttctctctgaaagatgagattttttt  6980300                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----       <---------AHL20(2)                                                                       <----       --------->ATHB12                                                               <---------YAB1      <---------AHL20(2)                                             --------->ARR11(3)         <----   --------->AHL20(2)                                                <---------ARR11(3)     <--------   <---------AHL20(2)                                               <---------GLK1(1)<---------AHL20(2)  --------->AHL20(2)                                     ----------->HVH21  <------------CBF<-------- -AHL20(2)                                               --------->ALFIN1 *TSS       <---------AHL20(1) -------TOE2(3)                              <---------YAB1  <---------MYB46(3)    <---------YAB1   gagatttatttattgagagagagagagagagagaccacttgagacttgtgatttgggaagtgatgggtcgatatctcttattgctattatttttgcttac  6980400       <----------DOF2 <---------ARR14(2) --------->ARR14(2)                       --------->ETT(2) -----bZIP60(2)                           <---------ETT(2) -----O2                         <----------DOF2  <----------DOF2 -----ANAC55(2)            ------>ZmHOX2a(1)      ------>ZmHOX2a(1) -----ANAC58              ----------------------->TaNAC69(2)                                        < -----ANAC58            <---------ATERF1(1)<---------DDF1                                       ----- -----ANAC46          <---------PCF2    <-------PIF5                                   <<<<<<<<<<MYB80 -----ANAC55(1)       <---------ANAC58  ------->PIF5                     ------>ZmHOX2a(1)  <-------- -ANAC58              <---------ANAC58 --------->ANAC46          <---------ALFIN1     <------MYB46(1) -ANAC58         <-----------RAV1(1) <---------AtLEC2           <---------ZAT18       <------MYB83 <-   gtggattttctttgtgtttttgtggggtcctccctctttgcacgtcgacatcctttctctacttcgcacactctcctctactcttgtttggtttgagata  6980500    <---------ARR11(3)    --------->ARR11(3)   <---------CCA1(2)                                                               ------>MYB83     - --------->ANAC55(2)                  <---------YAB1                               ------>MYB46(1)  - <---------ANAC55(2)        ----------->GT1                          <---------ANAC58               < -------TEIL             <---------TOE2(1)                           <---------ANAC58   <----------DOF2 ------>GT1           --------->TOE1(2)                          <----------DOF2 <---------MYB59 ---- -TOE2(3) --------->YAB1 <---------TOE1(1)               --------->DAG2         --------->ANAC46<---- ----------GT1        --------->TOE2(2)                 ---------->DOF2     ------>ZmHOX2a(1)   -----   gttacatatctatgagaactaaaacatacgaggttatactctcattacatccacttaaaaaagtcgtctttgcttctcctaaacccaactctttagaaga  6980600                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                             --------->ARR11(3)                                                                             --------->ARR14(3)          --------->DOF5.7(2)                                                <---------ARR11(3)         --------->TOE2(3)                                                   --------->ARR14(2)         <----------DOF2                                                     <---------ARR14(3)         --------->TOE1(3)                                                 --------->ANAC58 -------->ARR11(3)                                      <---------YAB1 --------->ANAC58 -------->AHL20(1)                       --------->ARR14(2)            --------->ANAC58 ---------AHL20(1)                       <---------ARR14(2)            --------->AtLEC2 ----->CCA1(2)                          --------->GLK1(1)  <---------WOX13(1)<---------ARR14(2) -----ARR11(3)                          <---------CCA1(2)--------->ATHB12  --------->ANAC58        -- ---->ARR11(3)            <------ZmHOX2a(1)    --------->AHL20(2)   <---------ATHB12<---------LBD16--   tatatattgaactttaactcaaatgctaggaacatggttctcatatccattatatgtgttcattgactccatcatgcaagatattccacgcgataacatt  6980700             ----------->GT1        --------->AtLEC2             <---------ANAC46    --------->WRKY18(1)        <---------ICU4          <-----------HVH21        --------->YAB1         <------MYB83--------->MYB46(3)     --------->YAB1            <------MYB46(1) <----------DOF2 --------->YAB1      --------->DAG2 --------->ANAC58    <---------ZAT14          --------->ANAC58 ------->ANAC58     ---------->DOF2 --------->ANAC58    --------->ZAT14       <---------GLK1(2) ------->ANAC58----------->GT1--------->MYB59  <---------DAG2  --------->GLK1(1) --------->ANAC58   caagcattaaaaatgatgtgaaaaaagtatgttcggtcatgccaaaccacttttcaagtttactgaaatctacaaaaactgattcgcaaaaaaaaaacat  6980800                       --------->GLK1(2)                      --------->ARR14(2)                      <---------GLK1(2)                      <---------ARR14(2)                    ----------->ARR10                   <--------P                 <------MYB83                 <---------ANAC46                 <------MYB46(1)                                                         --------->ATHB12                --------->MYB46(2)                      <---------ICU4        <---------GLK1(1)                --------->MYB59                        <---------YAB1         --------->GLK1(1)   <--                --------->MYB111(2)                    --------->ICU4     --------->YAB1--------->ICU4                --------->MYB111(1)       <---------ATHB12         <-----------GT1      <---------YAB1   tctttccaattgactagtttggtagattctgaaaactcgtcccaaacaatatggataatgaatacaatttcacaaatcagaaatctctacatgattagtt  6980900  Previous    Next  AGI:  At3g20015.1    Description:  pepsin A. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G18490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65957.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 6978483    to: 6980374    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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