Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ARR11(3)              <---------MYB52(1)                        --------->REM1(2) ------>ARR14(2)             <---------DAG2             <---------DAG2----------------->AGL1 -------ARR14(2)      <------------------------ANAC81   <----------DOF2--------->TOE2(3)           -- -----GT1            ------>ZmHOX2a(1)               <-----------GT1<-----------GT1     <-----------GT1 ----GT1<----------DOF2      <----------DOF2     <------------------------ANAC81   ----------->GT1 <-   gattcgagctctttctcgtcttcctcttctactttttctgttttttttttttgttttacttttcttacatttacctcatcgtgtagggttttacatttct  6971000                                                                                                 ----             --------->ATHB12                   --------->ALFIN1                                 ----           <---------WOX13(1)                  --------->LBD16                                  <----          <---------ANAC58                    --------->ANAC55(2)                              <-----          <---------ANAC58                    <---------ANAC58                                <------          <---------ANAC46                    <---------ANAC46                     <---------ANAC58    --------->LBD16                           <---------ANAC55(1)                  <---------ANAC46  <---------LBD16                             <---------ANAC58                     <---------ANAC58 ------->ARR14(2)                         <----------DOF2                 <---------At4g35610 <------ --------ARR14(2)  <----------DOF2  <----------DOF2                       --------->At4g35610 <------   gaatcccgcattgcttgatttcttttgtttatggccttctttcgctttccgtgttgctaaattagtttccgatttcagcgaaatagcgtttttgttccgt  6971100                                                                                                   <-                                                                                                 <---                                                                                               ------ ----->WRKY12                                                               <---------MYB46(3)<------ ----->WRKY38(1)                                                           <---------WOX13(1) <------ -----MYB52(1)                                                            <------------CBF    <------ --GAMYB                                                                --------->ICU4   <---------REM1(1) ---ANAC46                                 <---------MYB52(1)           <---------YAB1   <---------MYB46(3) ---ANAC58                        --------->TOE2(3)                   <---------At4g35610<-----------RAV1(1) ---ANAC58                        --------->TOE1(3)               <-----------RAV1(1) <-----------RAV1(1)   tgatcatccatttcgaggtttatgccaagtcgtcaaccttacaccgttttcaaaaatcaacttattttgtggtgctgattgttgatttttgttgttgctt  6971200                                            <------MYB46(1)    <----------DOF2                <----------DOF2                          <---------ANAC58 -----ZmHOX2a(1)                  <---------ANAC58                          <---------ANAC58 ------TOE2(3)                    <---------ANAC46                     <----------DOF2 --------------->WRI1             <---------ANAC58                  --------->ARR11(3) ---ANAC58                     <---------RAP2.6(2)                  <---------ARR11(3)        <------ ---ANAC58          --------->MYB52(2)      <------MYB83           <---------CCA1(2)    --------->ARR14(2) ---ANAC46     <---------TOE1(2) <------NtERF2                 --------->ZAT6           <---------ARR14(2)   aggatgctttgttttcgaatgttagttcaaatggtggctttgtagtgggtttcatttggagaataacacaaatcttttgcttcgcaggctgattcggttt  6971300                                               --------->GLK1(2)                                              <---------ARR11(3)                                   <---------ANAC46                                   <---------bZIP60(2)                                ----------->TGA1          <---------GLK1(2)                    ------                     ----------->RAV1(2)      --------->ARR11(3)                      <---------ZAT6     --------->ARR11(3)         ----------->HVH21         --------->ARR14(2)      <---------MYB52(1)     <---------ARR11(3)    <------ZmHOX2a(1)----------->ARR10                   <---------TOE2(3) ---------->DOF2     <---------At4g35610   <------ZmHOX2a(1)                    <---------TOE1(3) ---MYB52(1)    <---------GLK1(2) <---------TOE2(3)       <---------ARR14(2)   <-----------RAV1(2)   cttaaaagacctattactgattcttctgaggagactgacgttgaaggagattttgtaatggattctgctattgaaattagttcaggtagtgatagtgatg  6971400                                                    <-------MYC3                                                    ------->MYC3                                                   --------->PIF3(3)                                                   <---------O2                                                   =======================================bZIP_DOF                                                   --------->O2             ------>NtERF2                         --------->TGA1a            --------->DEAR3(1)                     <---------TGA1a          --------->ZAT14                      ------>ZmHOX2a(2)          --------->ABI4(1)                   --------->PCF2                   <----------DOF2          --------->At4g35610                 <------ZmHOX2a(2)             <---------ARR11(1)          <---------At4g35610                ------->TEIL                   --------->ARR14(2)         --------->DEAR3(1)                  <---------ARR14(2)             --------->ARR11(3)        --------->ANAC46                     --------->ARR14(2)             <-----------ARR10      <---------ALFIN1                  =============HOX2a_HOX2a            <---------ARR14(2)      --------->AtMYB61                 ==============HOX2a_HOX2a           <---------ARR11(3)     --------->MYB46(3)                 <------ZmHOX2a(1)                  <---------CCA1(2) ----->TGA1 --------->RAP2.3(3)      <-----------RAV1(2)                   --------->GLK1(1)   <-----   acgaagtaccaccgcagcctgtttggccacaaactcgaaccaggatggatcccacatggctaagtatagtttttggcatatctttgtcaatttcggtctt  6971500                                                                                  <---------ZAT14                                                                               <---------ANAC58                                                                               ----------------->AGL1                                                                               <---------ANAC58                                                                        --------->ARR11(3)                                                                     <------ZmHOX2a(1)                     <----------DOF2                                --------->At4g35610  --------->ARR14(2)         --------->MYB52(2)                                         <---------At4g35610  <---------ARR14(2)       <---------MYB52(1)                                         <-----------RAV1(2)  <---------MYB46(3)       <--------P<--------P                   <---------ANAC46 <---------ATERF1(2)--------->ZAT14     ----------->GT1 <---------DAG2   <----------DOF2     <----------DOF2  <----------DOF2 -----DOF2    <---------AtMYB61   ------>ZmHOX2a(2)    <-----------GT1  <---------ARR11(3)      -----   tctggtgaggttagttttggtagctttatggactgatcgactttgatgctgtgtttttttctttgcaggcaggagacctttgcctacagtggatagccat  6971600                                <-----------RAV1(1)                                <---------ATHB12                           >>>>>>>>>>>>>>>>>LFY                                  --------->ANAC58                          ------>ZmHOX2a(1)                                      --------->ANAC58   <---------At4g35610  --------->ATERF1(1)                                 ----------->HVH21   --------->At4g35610 <---------ATERF1(1)              ------>NtERF2      <-----------HVH21      ---  <---------AGP1      --------->ARR14(2)    <---------ZAT6       <-----------ARR10              ----- ---->AtLEC2     <---------ATHB12   ------>NtERF2    --------->HSFB2a(2)  <----------DOF2  <---------ZAT14   gctagagctgaacatacaaatcaggctcctcccaatggtgcctcgagtgatacttctcggcctggagtctctaagcctttcacagggaatgggaacactg  6971700                            <---------YAB1                            --------->ICU4                      <-----------RAV1(1)                     ------>ZmHOX2a(2)                         ---------->DOF2                   --------->ARR14(2)                   <---------ZAT2                   <-----------GT1                   <---------ARR14(2)                  --------->ANAC58           <----------DOF2       <---------GLK1(2)  <---------At4g35610  --------->At4g35610 <---------ARR11(3)--------->AHL20(2) ------>ZAT14      --------->ARR11(3)          <---------At4g35610 --------->ARR11(3)<---------AHL20(2) ---->At5g28300    <---------AGP1 <---------ANAC55(2)  --------->ANAC58    <---------ALFIN1  <-------   taaactcgagaatttccagtggatctggtgctgattatgtgagactgtcttctgagcaagctctgaaaagaactcttccaccctcttttaattcccctcc  6971800                 <---------MYB52(2)            --------->ALFIN1      --------->HSFB2a(2)      --------------->AGL15      ===============================MADS_MADS      <------MYB83      <---------------AGL15                         <------MYB46(1)      <---------HSFB2a(2)                          <---------AtMYB61                            -----     ----------------->AGL1                   <---------ANAC58                              ---------     <-----------------AGL2            <---------ZAT6 <---------ANAC46               <---------ZAT2     ----------------->AGL2      <---------YAB1   <--------P                        --------->ANAC58     <-----------------AGL1 --------->ANAC46  <---------ANAC58                      --------->ANAC58   ------>ZmHOX2a(1) <---------------AGL15    <---------ANAC46 <---------YAB1    --------->ZAT2 <---- --ALFIN1 <---------O2      --------->ANAC55(2) <-----------RAV1(1)              --------->At4g35610   ccttcctgccagaagtggcactaacaatataagtaatgctagtggaagtcgtgttggtgtggattatgagagaccattgtctcagcaagctctgaaaaga  6971900  Previous    Next  AGI:  At3g20010.1    Description:  SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein. similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G50410.1); similar to EDA16 (embryo sac development arrest 16) [Arabidopsis thaliana] (TAIR:AT1G61140.3); similar to EDA16 (embryo sac development arrest 16), ATP binding / DNA binding / helicase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G61140.1); similar to putative ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD52846.1); similar to hypothetical protei Range:  from: 6971358    to: 6976601    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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