Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           >>>>>>>>>ARR1         >>>>>>>>>ARR2       <---------TOE2(3)       <---------YAB1                     --------->YAB1 ---------At4g35610                      <---------YAB1 -------ZAT18                          <---------ICU4 ------>ZAT18                          --------->YAB1 ------>SPL7                          --------->ICU4 ----TGA1a                          --------->YAB1                   --------->YAB1   ------->TEIL ----ANAC58                       ------>ZmHOX2a(1)      --------->YAB1 ---------->DOF2   ------->TEIL ----ANAC58                      --------->TOE1(3)     --------->AHL20(2)     --------->ANAC58 --->TGA1a                       --------->TOE2(3)     <---------AHL20(2) <---------TOE2(3)         < ----ANAC46                <---------ALFIN1  ---------->DOF2---------->DOF2   --------->ANAC58     --   tgcgctaataagattgttcttcacaacttccacatccttaataatcataaagaatgttttaataaagagattaataaaggaagccatgtatgtatgtagt  6967200                                                                                                    <                                                                                                  <--                                                                                            ---------                                                                                       --------->CCA1(2)                                                     <---------DAG2       --------------->AGL15<-----            <<<<<<<<<<<<<<<<<LFY           <----------DOF2               --------->ANAC58  --------->ARR11(3) ------ZmHOX2a(2)                <---------AHL20(2)  <----------DOF2     --------->ANAC46  <---------GLK1(2) ------->ARR11(3)                <---------YAB1 <-----------HVH21        --------->ANAC58----------->ARR10   agatcaagtcttcttgacattggtatgtctgaaatattattaagcctttcggtcactttttaagagtcttgtttcacccaaatgagaagataagattctg  6967300       --------->ANAC58       --------->ANAC58   ------->GAMYB                                --------->AHL20(2)  --------->MYB46(3)                            <---------AHL20(2)               --------->ATHB12 -----------GT1      <---------HSFB2a(2)        <---------AHL20(1)    --------->CCA1(2)            <- -------WOX13(1)     --------->HSFB2a(2)  ----------->GT1        ---------->DOF2<---------YAB1     -- >GLK1(2)     ------->GAMYB             --------->TOE1(2)   --------->YAB1<---------ZAT18 <---------AHL20(2) ----YAB1    <---------ALFIN1        <-----------GT1        ----------->GT1   <----------DOF2  ------   attaaccacaagacaacacacttccacaaactacattttaaacctggtaaaaaatttgacaatagtaaaaagatagaccactttcattgcatttttttta  6967400                                                                                     <-----------RAV1(2)                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                            <------MYB46(1)                                                                            <------MYB83                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                           --------->MYB59                          <---------WOX13(1)                          <---------AHL20(2)                        --------->ATHB12                         <------MYB46(1)  --------->ANAC58                   <---------AHL20(2)                          <--------P  --------->MYB111(1)                   --------->AHL20(2)                  <----------DOF2--------->AHL20(2) --------AHL20(2)  <---------AHL20(1)                --------->At4g35610   --------->MYB46(2) ------->AHL20(2)  --------->AHL20(1)             <---------At4g35610 --------->AHL20(1)  <---------SPL7 --->AHL20(2)     --------->AHL20(2)             <-----------GT1 <------MYB83  <-------TEIL         -   tataaataacttctactgtattaaattgattgggatgctcaagagtttatttagccgcttaagaggttggaattaattaggtgcaagacaggcgaacgag  6967500                                --------->LBD16        --------->ANAC58       --------->LBD16        --------->ANAC58       ----------->GT1      <---------ALFIN1        <---------LBD16                                           *TSS     <---------REM1(2)       <---------LBD16                                          <---------ZAT2    ------>NtERF2          ------>MYB83                                               --------->At4g35610   ----------->HVH21       --------->MYB52(1)           <-----------GT1               --------->ZAT2   <---------ETT(1)        ------>MYB46(1)           --------->YAB1                   <---------At4g35610   --------->ANAC58      --------->AtMYB61           <---------ICU4              ------>NtERF2   --------->ANAC58      <---------MYB59            --------->ICU4            <---------ATERF1(1)   <   --------->ANAC46     ----------------->AGL1      <---------YAB1           --------->ANAC58      -- -------->PCF5--------->HSFB2a(2)               ----------->GT1              --------->ANAC58      --   gggtcccgacacggttcgagattaagaccaaaccgggaaaaaccagaaaatggtataattacaaaacccttaccaagactcgcctccaagctgaagaaaa  6967600                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <------NtERF2                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                          <---------LBD16                                                                                        <---------DEAR3(1)                                                                                       --------->ATERF1(1)                                                                                     <---------DEAR3(1)                                                                                    <------NtERF2                                                                                   <---------RAP2.3(1)                                                               --------->GLK1(1)   ------>NtERF2-----                                                              --------->ARR14(2)   <---------ERF1<---                                                              <---------ARR11(3)   <---------ORA47(2)                                                              <---------ARR14(2)   <---------ATERF1(1)                                                              --------->ARR11(3)   <---------DEAR4(2)                                                             <------ZmHOX2a(1)    <---------RAP2.3(2)                                                           <---------TOE2(3)      --------->ATERF1(2)                                                       --------->At5g28300        <---------RAP2.6(2)                                                     <------NtERF2                <---------DEAR3(1)                                         <----------DOF2 ---------->DOF2          <---------RAP2.3(3)         <----------DOF2    ---------->ID1         <---------ETT(2)               <---------ANAC46 ---------MYB52(1)        <---------ANAC58       <-----------HVH21               <---------ABI4(1) ------->TOE2(3)          <---------ANAC58      <-----------RAV1(1)              --------->ATERF1(1)< ------->TOE1(3)  ---------->ID1      ---------->ID1------>NtERF2    ---------->DOF2--------->ATERF1(1)   cccttaattctctttctcttgttccatttcgtcccattttgttctttctactgtcgccgtaaaggatattcaaaagcggtagaggcggcgatggcggatc  6967700                 <------NtERF2                --------->RAP2.6(2)                <---------DEAR3(2)                <---------RAP2.3(1)                <---------ORA47(2)      <------------------SPL14   <---------ALFIN1 <---------At5g28300 -ZmHOX2a(2)    ------>NtERF2                                                       --------------->AGL15 ----RVE1(1)    ----------->RAV1(1)                                                 <---------------AGL15 ---ARR14(2)    <---------ATERF1(1)                                          ----------->RAV1(2) -->ARR14(2)   <---------ATERF1(2)                                    ------>MYB46(1) ---ARR11(3)   --------->ATERF1(2)                                    ------>MYB83 ----------------->AGL2 ---ARR11(1)   <---------RAP2.3(2)                                 --------->HSFB2a(1)        ------- ---AGP1 ----------->HVH21                                         <---------HSFC1(2)         <------ -->ARR11(3)   <---------RAP2.3(3)                                 <---------HSFB2a(1)       -------- --CCA1(2) <---------At5g28300                                     --------->HSFC1(2)        <------- --ARR14(1)--------->SPL7                                          --------->MYB46(3)       <------ZmHOX2a(1) ->ZmHOX2a(2) <---------LBD16                                 <---------HSFB2a(2)  ----------------->AGL1 -------DOF2 <---------RAP2.3(1)      ---------->DOF2         --------->HSFB2a(2)  <-----------------AGL1 -----------GT1<---------DEAR3(1) --------->ZAT6  ---------->DOF2 ------->TEIL ------>ZmHOX2a(1)  <--   ttttaccacctcttacggcggcacaagtcgatgctaagactaaagtcgatgagaaagtcgattactcgaacctcccttctcctgttccctatgaggaact  6967800                           ------>ZmHOX2a(1)                           =======================HOX2a_HOX2a                       <---------ARR14(2)                       --------->ARR14(2)                      <---------GLK1(1)                      --------->GLK1(1)       <---------At4g35610--------->TOE2(3)    ---------->DOF2   <---------CCA1(2)    <------ZmHOX2a(2) -->GLK1(1)          --------->ARR14(2)   --------->AGP1                  <---------ANAC58 ---GLK1(1)          ---------->TaMYB80   --------->ARR14(2)         <----------DOF2                < ->ARR14(2)       <---------ANAC46        <---------ARR14(2)     <----------DOF2                    - --ARR14(2)     --------->ZAT14    <----------DOF2           <----------DOF2>>>>>>>>>>>>>>>>>LFY    < -------ALFIN1  <---------ZAT14    <---------DAG2        --------->YAB1   <---------ANAC58 <-------GAMYB   ccaccgtgaagctctcagttcagtatatcctaaatcccttttccgatctagtttttcaatcgtctttctttcttttgcttccattgtaacttcagttgta  6967900                                                          <---------ZAT14                                                          --------->ZAT14                                                          --------->ZAT18                                                       <---------ANAC58                                                       <---------ANAC46               <-----------RAV1(1)                 <----------DOF2      --------->ARR11(3)     ------>ZmHOX2a(2)    <---------ANAC46      <---------ARR11(3)   <---------AGP1         <---------ANAC58     <---------GLK1(1)  <---------------AGL15     <---------ANAC58 ---------ANAC58       <---------ANAC58      <-----------RAV1(1) -------->TOE2(3)      <---------ANAC58      --------->ALFIN1                          <----------DOF2 ---------ANAC58 ---------->ID1      --------->AHL20(2)<---------ANAC58       <---------TOE2(3)   ttccttgatatctctatttgttgtttcttgatctggagataaaatgagtgtggctttgagtgcattgtattggactgtttgagatttagctttcttctgt  6968000                                                                                                  ---                                                                                                  ---        ---------->DOF2                                                                          ----     <---------ANAC46                                                                         <------     ----------->GT1                                       <---------ARR11(3)     --------->YAB1 <---    --------->MYB59             <---------YAB1  ------->TEIL      <------ZmHOX2a(1)          --------   ttgaattgggtaaagtctagcacattagtcgtttctaattgtttttcatgtatcatttcatggtcttaggagatttacatacaatagaaatgatataaaa  6968100  Previous    Next  AGI:  At3g19990.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO65961.1); contains domain TPR-like (SSF48452) Range:  from: 6965653    to: 6967254    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g20000.1    Description:  TOM40 (translocase of the outer mitochondrial membrane 40); voltage-gated anion channel. Identical to Mitochondrial import receptor subunit TOM40 homolog 1 (TOM40-1) [Arabidopsis Thaliana] (GB:Q9LHE5); similar to porin family protein [Arabidopsis thaliana] (TAIR:AT1G50400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67829.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) Range:  from: 6967588    to: 6970572    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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