Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ------>ZmHOX2a(2)                                                 <----           --------->AHL20(2)<------ZmHOX2a(2)                                                  <----          <---------AHL20(2)--------->ARR11(3)                                                  <----         --------->AHL20(2) --------->ARR14(3)                                              <--------         <---------AHL20(2) <---------ARR14(3)                                              ---------      ------>MYB83          <-----------ARR10                                              <---------ANAC46      ------>MYB46(1)       <---------ARR11(3)                                             <---------ANAC58    <---------MYB111(1)     --------->ARR14(2)                                --------->WRKY38(1)    <---------MYB59         <---------AGP1                                    --------->WRKY12 <-----   --------->ANAC55(1)      <---------ARR14(2)                                ----------->HVH21------   --------->ANAC46     ---------->DOF2                           <----------DOF2-------->ZAP1<------ ----------GT1        <------ZmHOX2a(2)                     --------->At4g35610<---------WRKY18(1) ----ARR11(3)       --------->At4g35610           --------->AHL20(2) --------->At4g35610   <---------ANAC58 ----GLK1(2)   --------->RVE1(1)                  <---------AHL20(2) <---------At4g35610  <---------LBD16   tttacacctaatttaaaatatcagatcaaagatcttatctacaagactaaaattaaactagtagcggtctttgctgtccattgaccgagttttgcgggtg  6934400                                          <---------ANAC55(2)                                          ==================bZIP_DOF                                          <---------TGA1a                                          --------->ANAC55(2)                                          --------->O2                                          <---------O2   ================================================================================MADS_MADS   <---------------AGL15              <-----------HVH21   --------------->AGL15             ------->GAMYB --MYB46(1)                          ===============MYC_MYB --MYB83                            ================MYC_MYB -----MYB46(3)                      <------------AtMYB77                       <---------AHL20(2) -MYB46(3)                   <---------AHL20(2)                        --------->YAB1 >LBD16                      --------->AHL20(2)                    --------------->AGL15 ----AtMYB61                --------->AHL20(2)   ---------->DOF2  ----------------->AGL3 --->ALFIN1      --------->ANAC46 --------->MYB52(1)      ----------->GT1    <----------DOF2 ---MYB52(1)   <---------ALFIN1--------->YAB1  --------->ETT(2)   ----------------->AGL2  --------->ICU4   gtttactcatttaagtaccacagcatcaaattaaaataactgtcacttgtcgaaagtgactagataaaaccaaaaatagctttaattgagtcaaaattgt  6934500                                                                  <-----------GT1                                                              <---------AHL20(2)                                                             --------->AHL20(2)                                                         <---------AHL20(2)                                                         <---------AHL20(1)                                                         --------->AHL20(1)                ----------                                                         --------->AHL20(2)                <------MYB83        ---------->DOF2                              --------->AHL20(2)       --------->GLK1(2)      <---------ZAT14    --------->At4g35610         --------->ICU4          --------->YAB1<------MYB46(1)      --------->ZAT18  --------->YAB1       <---------YAB1   <---------AHL20(2)           --------->MYB59     <---------ZAT6   <---------YAB1      --------->ATHB12   <---------AHL20(1)   ----------->GT1  >>>>>>>ZML2---------->DOF2     ---------->DOF2     <---------AHL20(2)     <---------ATHB12   agttctagtgcaaagtaaagagttatcatcttacaaaatgcgactcattagtgtattaattaattaattttcagtccaataatctggttaatttggtaaa  6934600                                                                             <------MYB46(1)                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------ICU4                                                                        --------->ATHB12                              --------->ICU4                            --------->ATHB51                          <-----------TGA1                           --------->YAB1                          <-----------HVH21                          --------->ATHB51                         --------->bZIP60(2)                         <---------ICU4                         --------->ANAC46                            <--------HAHB4                  -------->HAHB4                                     <--------ATHB1                  --------->ATHB12                                  --------->ICU4                  <---------ICU4                                    <---------ATHB51                 <---------ATHB12                                   --------->AHL20(2)              -              <---------AHL20(2)                                    <---------ATHB12                -             --------->AHL20(2)                       --------->ANAC58 <---------YAB1               -             <---------AHL20(2)<---------ICU4         --------->ANAC58 --------->ICU4             --- ->GT1 ----------->GT1  ------>ZmHOX2a(1)    <-----------GT1---------->DOF2  <------MYB83    --------   ctatccaaagagtaattaaatgattcctcgtcataaatactaattttctacgttttaagcaaaaaagacaataattatttggtctgaaaactaaaaaaag  6934700                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                <------ZmHOX2a(1)                                              ------                           --------->HSFB2a(2)                                                 ------                           <---------HSFB2a(2)                                                 ------                        <---------ARR11(3)                                                     ------                        --------->ARR11(3)                                                     ------       --------->MYB52(1)<------ZmHOX2a(2)                                                    ------- -------->ANAC58       ------->GAMYB                          --------->At4g35610            -------- -------->ANAC46    <---------DOF5.7(2)                       <---------At4g35610            <------- -------->ANAC58    --------->MYB52(1)           <---------ARR14(2)  <----------DOF2         <------- ------>CCA1(2)   --------->ARR11(3)       --------->ALFIN1 --------->MYB46(3)               -------- -->DOF2<---------TOE2(3)==============HOX2a_HOX2a        ----------->RAV1(1)  *TSS      <-----------HVH21   acacgagattaagggaagaagataacgatctagaggaataggcaagtggaagaaccagaacaacagctgttcttttcttctaaacttcagaagtcagccg  6934800  <---------AHL20(2) <---------MYB52(1) -------->At5g28300 -------GAMYB --------->GT1 -----RAP2.6(3) ------>RAV1(1) ->NtERF2 --->At1g77200 ->GAMYB --->DEAR3(1)                                                                              <<<<<<<<<TBF1 --->DREB2C(2)                                                                          <<<<<<<<<TBF1 ----->HVH21                                                                          <xxxxxxxxxxxxxx --->RAP2.3(3)      <---------TOE2(3)                                              <----------------- -->DEAR3(2)        <---------TOE1(3)                                             ---------->ID1 ->At4g35610<---------DAG2             --------->AHL20(2)                   --------->ARR11(3) --At4g35610<----------DOF2         ------>ZmHOX2a(1)                       <---------ARR14(2)      < --ZAT2  ---------->ID1         --------->ARR14(2)                          <-----------ARR10    <<<< ->ZAT2 <-----------GT1         <---------ARR14(2)                         <---------CCA1(2)  <<<<<<<   acagttaatttctcctttttttgaggttttgtcgaatcctataaatttcaactaaactcttcttcattttcaatatcaaatcttgtcttcttcttcttct  6934900                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                 --------->ARR14(1)                                                                                 --------->CCA1(2)                                                                  --------->TOE1(2)                                                                  --------->TOE2(2)                                                            <---------ICU4      --------->AGP1                                                           --------->ICU4       <---------AGP1                                                       ------>ZmHOX2a(2)        <---------ARR11(3)                                                      <------ZmHOX2a(2)         --------->ARR11(3)                                                     <---------AGP1             <---------ARR14(2)                                                     --------->ARR14(2)         --------->ARR14(2)                                                     <---------ARR14(2)         <---------ARR14(3)                                                     <---------ARR11(3)         <-----------ARR10     <----------DOF2                                 --------->AGP1             --------->ARR14(3) xxxxxxxxxsmallRNA(se3)                              --------->ARR11(3)        --------->RVE1(1) -------ANAC81                                      <---------CCA1(2)       ---------->DOF2 <<<<<<<<TBF1                               <---------HSFB2a(2)  <---------ANAC55(2)      <---------MYB52(1) <<<<<TBF1                                  <---------HSFC1(1)   ----------->RAV1(2)--------->At4g35610 <<TBF1     <<<<<<<<<TBF1  <---------GLK1(1)--------->HSFB2a(2)<-----------GT1----------->ARR10   tcttcttctttttcttcttcttacatttgatttctctgtctgaattcgagaaccagatctactaattacctgagagaaaaaagatctgctctgtttgtct  6935000                                                                    --------->WOX13(1)                                                                  <---------MYB52(1)                                                                 <-----------HVH21                                                               <-------TEIL                                                            <---------HSFC1(2)     <---------SPL7                                                            --------->HSFC1(2)    --------->ALFIN1                                                         <------NtERF2        <---------ANAC46                                                        --------->LBD16      <---------LBD16                                                        <---------SPL7     --------->ANAC46                                                        <------NtERF2      ------->GAMYB <---------ARR14(2)                  <---------ARR11(3)                  <---------LBD16 --------->WRKY18(1)--------->ARR14(2)                  --------->ARR11(3)        ---------->DOF2 --------->HSFB2a(1)--------->LBD16               --------->MYB46(3)         <---------ATHB12  <---------HSFB2a(1)------>NtERF2      ---   gaaacagacagaagtcaacaaatctttcatttgttttttagcaaatcaaagaaatggccggagggttcgtcagtcaaacgccgggtgttcggaactacaa  6935100                                                                                <-----------RAV1(2)                                                                              ------>ZmHOX2a(2)                                                                             <---------GLK1(1)                                                                             --------->GLK1(1)                                                                             <------ZmHOX2a(2)                                                                            <---------ARR14(2)                                                                            --------->ARR11(3)                                                                            --------->ARR14(2)                                                                        <---------LBD16                                                                       <---------LBD16                                                <---------AtMYB61     ------>ZmHOX2a(2)                                             <-----------RAV1(1)     <------ZmHOX2a(2)                                          <----------DOF2           <---------ARR11(3)                                         <---------ANAC58           --------->ARR11(3)      <--------          --------->ANAC58               <---------ANAC58       --------->CCA1(2)        <-----------GT1          --------->ANAC58<---------bZIP60(2)<---------AtMYB61 --------->ARR14(2)<---------TOE2(2)     ----------->HVH21 ----------->HVH21--------->ABI4(2)      <---------ARR14(2)<---------TOE1(2) ------>YAB1 ---------->DOF2        <---------DEAR3(1)     <---------LBD16  <---------ARR11(3)   ttacaaactgacaccgaaagtgtttgtgacatgtttcatcggtgcttttggtggtctcatcttcggatacgatctcgggatctcaggtttttttcttttc  6935200                                       ----------->HVH21                                       --------->WRKY38(1)                                   <---------LBD16                                 --------->ARR14(2)                                 <---------ARR14(2)                                <---------GLK1(1)                                <---------HSFB2a(1)                                --------->GLK1(1)                          <---------HSFB2a(2)                         ------>ZmHOX2a(2) --------------->AGL15                       --------->AGP1--------->LBD16                       --------->ARR11(3)  <---------------AGL15               --------->TOE2(3)                    ================HOX2a_HOX2a  <---------TOE1(3)             --------->TOE1(3)                    ------>ZmHOX2a(2)<---------At4g35610                    --------->ARR14(2)                   <---------At4g35610<---------MYB52(1)                    <---------ARR14(2) --DOF2       <----------DOF2<------ZmHOX2a(1)   <---------TOE2(3)   <------ZmHOX2a(1)   ttcaagtcttgttcttctttgatctgatctaggaatttccggtgactaattagggtttctatattcttgtaggaggggtaacctcaatggagccattctt  6935300  Previous    Next  AGI:  At3g19930.1    Description:  STP4 (SUGAR TRANSPORTER 4); carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. Identical to Sugar transport protein 4 (STP4) [Arabidopsis Thaliana] (GB:Q39228;GB:Q570J6); similar to monosaccharide transporter (STP9) [Arabidopsis thaliana] (TAIR:AT1G50310.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G19940.1); similar to Os07g0106200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058704.1); similar to monosaccharide transport protein 1 [Zea mays] (GB:NP_001105681.1); similar to Os07g0559700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059981.1); contains InterPro domain General substr Range:  from: 6934779    to: 6937126    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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