Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ===============                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                     ================                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(3)                                                                                    --------->ARR14(3)                                                                                    --------->AGP1                                                                                    <---------ARR11(3)                         <---------GLK1(2)                                          --------->ARR11(3)        --------->ARR11(3)                                                    --------->TOE2(3)        <---------ARR11(3)                                            --------->TOE2(1)    <------MYB83       <---------ATHB12                              --------------->AtSPL8    <-----    <------MYB46(1)    <---------YAB1                          --------->ZAT6 --------->TOE1(3)<----- --------HSFB2a(2)     --------->ICU4   ----------->GT1   --------->YAB1 --------->SPL7      <------- ---->ZAT2        --------->ANAC46  XXXXXXXXXXXXXXXXXXXX>MIR4243   --------->YAB1   <---------AGP1 -- -----ZAT2------>ZmHOX2a(2)     <---------ANAC46       ----------->GT1--------->TOE1(1)    <---------MYB46(3)   cctggaaggtgatcttcttccccccatgattctgtcttgaaattgtaaacttcgtagtagtaataacactcatcgtacaacctcaagatcttgtggttct  6915700         <---------ARR14(2)         --------->MYB52(1)         --------->ARR14(2)      <---------ANAC58      <---------ANAC58                                                            <---------ARR14(2)     ---------->ID1                                                               --------->ARR14(2)  ------>ZmHOX2a(1)                                                            --------->ANAC55(2) <---------ANAC58                                                              <---------ANAC55(2) <---------ANAC58                                                       ----------------->AGL3  ----- ========HOX2a_HOX2a                                                    ----------------->AGL2 ------ ========HOX2a_HOX2a                                       <---------ALFIN1   <---------LBD16-------- ----ANAC58                                              <------ZmHOX2a(2)  <---------ARR14(2) <----- ----ANAC58                                        <---------ANAC58  <---------WRKY18(1)   --------->AtMYB61 --ARR14(2) ------->GAMYB                          <---------ANAC58 ----------->HVH21   --------->ANAC46 -------->ID1                         <---------MYB52(1)--------->ARR14(2)  --------->ARR14(2)-------   tgtccttgtcgtaaccgagagcaaacatgtctgattcgtcgtgaggttctcttgcttcgatccacttggtttgacccaaatacggattccaaaccacaac  6915800                                --------->AtMYB61                                        ----------->HVH21                               --------->MYB46(3)                                 -------->P                        --------->ZAT6                                            ------>MYB46(1)                       <---------ZAT14                                            ------>MYB83                     --------->ANAC46                                            --------->MYB55(1)                   --------->ANAC46                                             <---------MYB111(1)                  --------->ZAT18                                               <---------MYB46(2)      <-----------HVH21--------->ZAT14                                          <---------MYB59 ---->ZAT6        XXXXXXXXXXXXXXXXXXXX>MIR2939                                  <---------MYB111(2) --->ZAT14       --------->ANAC58                                               <------------AtMYB84 ->ANAC46 <---------ANAC46--------->ANAC46                                   <-----------GT1<-------- ----ZAT14<---------O2----------->RAV1(1)                            <-----------GT1  ------>MYB46(1) ---->RAV1(1)    --------->ANAC58               <----------DOF2    <---------WOX13(1) ------>MYB83   actagagttgtcacttggaacgcacaacactaaaccatcgcattgaaacactttagagatgtcgatttgattaactatatcacctacctccctgatagat  6915900                              --------->GLK1(1)                --------->TOE1(2)                              <---------GLK1(1)       --------->YAB1   --------->WOX13(1)                --------->DEAR3(1)                --------->ATHB12    ------>ZmHOX2a(2)     ---------->DOF2      --------->HSFB2a(2)    <---------YAB1--------->TOE2(2)                   --   <------ZmHOX2a(2)   <----------DOF2          --------->ARR11(3)    =============================== -WOX13(1)    <---------At5g28300               <---------ARR11(3)<---------ATHB12------->TEIL   ----   ggacgatcaaagccttcaccgtctccttttagaattccattgagatggaatatcattgataaaaacctatgatccatcaccatgaaccctagaaactgat  6916000                                                                      ------>NtERF2                                                                  --------->ANAC46                                                                  --------->TGA1a                                                                  --------->O2                            <----------DOF2                       --------->ANAC58                        ------>NtERF2                           --------->MYB52(1)                       ----------->HVH21                       ----------->HVH21                       --------->DEAR3(1)                     ------>ZmHOX2a(2)                       --------->RAP2.6(2)                   <---------GLK1(1)                      --------->DEAR3(2)                    --------->ARR14(2)                     <---------At4g35610                    <---------ARR14(2)                     --------->At4g35610                    <---------ARR11(3)          <---------DAG2<---------RAP2.6(3)      <---------ANAC58 --------->ANAC58          <----------DOF2   ================================================bZIP_DOF        --------->LBD16------->GAMYB             <---------ANAC58<---------LBD16 ---->ZmHOX2a(1)    ------->GAMYB   --------->DAG2          --------->ARR11(3)             --------->TOE2(3) =====HOX2a_HOX2a  --------->MYB46(3)  <---------ANAC58     <---------AGP1               ------>NtERF2 -->ZmHOX2a(2)     <---------MYB55(2)  <---------ANAC58    <---------CCA1(2)       --------->MYB52(1)   ccttcgcttccgctttatacaacagccgacctttggataaggcgttccattgtttgtgagtggatctcacggctccaagagaagttatcggagccttaga  6916100                  --------->TOE1(2)         <---------YAB1               --------->ARR14(2)        <---------YAB1               <---------ARR14(2)  <------ZmHOX2a(2)              ------>MYB83        --------->ARR11(3)              ------>MYB46(1)     <---------ARR11(3)            <---------MYB59 <------ZmHOX2a(2)            <---------MYB111(1)  --------->GLK1(1)       ===================================HOX2a_HOX2a       ============================HOX2a_HOX2a                                   <------------CBF       ------>ZmHOX2a(1)   <---------ARR11(3)                                   --------->ATHB12 --------->ARR11(3)        --------->ARR11(3)                                  <---------YAB1 <---------ARR11(3)=======================HOX2a_HOX2a                          <---------AHL20(2) --- <-----------ARR10--------->TOE2(2)<---------YAB1                <---------TOE2(3)           <------- <---------ARR14(2)================HOX2a_HOX2a                   <---------TOE1(3)           -------- --------->ARR14(2)------>ZmHOX2a(1)--------->YAB1      ----------->GT1<---------AtMYB61    <------ZmHOX2a(1)   gagtatctcctctaccaaatccttcgaaagatcagagatcatagtcattgttgtcaaatggagaattagggttttggtttttttattggtgagaggattt  6916200                               <----------DOF2                          <---------ALFIN1                  --------->ANAC58          <-----------GT1<---------ZAT18         <-----------GT1 --------->ZAT18                               <----------DOF2 ------->ID1      --------->ANAC58       <---------ANAC58   <---------ANAC58                    ----- --ARR14(2)       --------->ANAC46       <---------ANAC46   <---------ANAC58                    <---- ->ARR14(2)     <---------ALFIN1         <---------ANAC58 --------->ALFIN1           --------->TOE2(3)   gttttttttttttaacttccacgcttgcccactctttatattagcgtctactagataagtgtgcgtctaataactttcacaacgataccctaaatatgtc  6916300                               --------->AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                               <---------AHL20(2)                              --------->AHL20(2)                            --------->TOE2(3)                          <---------YAB1                                                 --------->ARR14(2)                   --------->At4g35610                                                ------------>CBF      <---------ALFIN1  <---------CCA1(2)        --------->AHL20(2)            --------->ANAC58 --------->ZAT14   <---------At4g35610        --------->TOE2(3)  --------->YAB1--------->ANAC58 ---->ZAT18   --------->HSFB2a(2) <---------AHL20(2)       --------->HSFB2a(2) --------->ANAC46 -----ZAT18   <---------HSFB2a(2) <---------ATHB51   <-----------GT1         <---------ALFIN1   <----   cactactcacactcttagggaagctcatatcattaaattattcaaatcccttaaattacttctgtaatcacattaacttccacgcttgcccaatactccc  6916400                                                        --------->LBD16               <---------CCA1(2)         <---------ANAC58                              --------->ANAC46        --------->ARR14(2)         <---------ANAC58                             --------->TOE1(2)        <---------ARR14(2)     --------->CCA1(2)                   --------->MYB46(3)                   --------->YAB1    --------->ARR14(2)            <-----------GT1     <---------LBD16       <---------TOE2(3)    ----   ----------->TBP                ---------->ID1   ---------->DOF2      <-----------HVH21       ----- -----ALFIN1                     <-----------GT1--------->YAB1 --------->TOE2(3)    --------->YAB1<--   actctatatatgcgtctactaaataagtgtgtgtttttccctaacaacttgcataacgcgcgataccctaaatatgtcaaggatactcatatcatctatc  6916500                       ------>ZmHOX2a(1)               <---------ALFIN1                          <---                  <-----------GT1                    --------->AtMYB61                           ----                 <---------AHL20(2)            --------->HSFB2a(2)                              -----           <---------MYB52(1)   --------->WOX13(1)   <---------ALFIN1                           <---- ----->TOE2(3)  <---------AHL20(2) --------->YAB1    ------->GAMYB                              <---- ---->YAB1--------->TOE2(3)  --------->ANAC46  <---------HSFB2a(2)                              ----- -------MYB52(1)--------->AHL20(2)<---------ATHB12  --------->MYB46(3)<----------DOF2   --------->ZAT18   gttattcaaatcccttaatttaatcctatatactcaatcacatttacttctgtaaccacacctatgtcttctcttttgtataaacttaagtactctaatt  6916600  Previous    Next  AGI:  At3g19890.1    Description:  F-box family protein. Identical to F-box protein At3g19890 [Arabidopsis Thaliana] (GB:Q4PSN8;GB:Q9LT20); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G32140.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 6914916    to: 6916148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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