Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                             <---------ANAC58                                                                             <---------ANAC58                  ---------->DOF2                                            <---------ANAC46                ------>MYB46(1)                                             --------->MYB55(2)           --------->ZAT6>>>>>>>>>TBF1                                      <---------MYB46(3)  --------->YAB1------>MYB83                                   --------->ALFIN1         --------->ANAC46 ------ANAC58  ----------->RAV1(1)                  <---------YAB1       <---------ARR14(2)------>MYB83 ------ANAC58 --------->AtMYB61                     <----------ID1       --------->ARR14(2)------>MYB46(1)   cttatcacaaataacaccaacaaagaagaagaatgcgaatagaccaattgcattacgactaatcggtggagacgggattgggtggattacacctagctga  6889600                                   ----------->GT1                              <---------TOE2(3)                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    --------->ARR14(2)                    <---------ARR14(2)                    --------->ARR11(3)    <---------At4g35610      ---------->DOF2 ------>ZmHOX2a(1)  <---------ARR11(3) ===========================HOX2a_HOX2a ============================HOX2a_HOX2a >ZAT2              <-----------ARR10                                                  <---------HSFC1(2) -At4g35610         <---------ARR14(3)                                                 --------->HSFC1(2) >At4g35610         --------->ARR14(3)                                       --------->ICU4        -- -ZAT2             <------ZmHOX2a(1)                                    ------>ZmHOX2a(1)         ---   gtcctgagcttatccactataggatcttctctaaagttagtgaaattgtttctatcaccttgaattgcagactcctgtgaagatgaagatgcttcttcat  6889700                                                                                              <------                                                                                              -------                                                                                              -------                                                                                         <---------GLK1(1)                                                                                         --------->GLK1(1)                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                    --------->SPL1(1)                                                                                    <---------SPL1(1)                                                                                   <---------SPL1(2)                                                    --------->DEAR3(1)             <---------SPL7                                         <---------At4g35610                      <---------ANAC58                                         --------->At4g35610                      <---------ANAC58                                         <------NtERF2                           --------------->AtSPL3                                    <---------HSFB2a(2)<---------ARR14(2)        --------------->AtSPL8                                    --------->HSFB2a(2)--------->ARR14(2)        <---------------AtSPL3                         ------->GAMYB   <---------ZAT2--------->GLK1(2)       --------->ARR14(2)     <-------TEIL       --------->MYB46(3)<-----------ARR10         <---------TOE1(2)--------->SPL7 ---->ZmHOX2a(1)      --------->ARR14(2)<<<<<<<<<AtERF-3    <---------MYB52(1) ------------------>SPL14 ------>TOE2(3)       <---------ARR14(2)<<<<<<<<<AtERF-4   --------->LBD16     <---------ARR14(2)   cctcaaattcattcgaaaaccgagtaaccacaagacttctggcagctcttctcgccgaatccgctaatccaatgttcttggaatccgtacgaattccgct  6889800                                                  ------>NtERF2                                   --------->MYB52(1)  <----------DOF2                               ------->TEIL       --------->LBD16                         ------>NtERF2           --------->ANAC46                         <------NtERF2           --------->DEAR3(1)                         ---------                         --------->LBD16        <---------LBD16                            ----------       --------->TOE1(2)--------->DEAR3(1)    <-----------GT1                              <---------  <---------MYB52(2)   --------->RAP2.3(1) --------->GLK1(1)                               <---------YAB1 ---At4g35610          <---------LBD16     <---------ARR14(2)                         <---------ANAC58 -->LBD16         <---------ARR14(2)       <---------GLK1(1)                          <---------ANAC58 -->At4g35610     --------->ARR14(2)       --------->ARR14(2) <---------ARR14(2) --------->YAB1   ggaaacaaacctagaattcgaattcgccgcatgaactcgacggagaattctccgcctctttgtgaatccatcggagaacacaatcagaccgtgctcattg  6889900                    ----------->HVH21                  ====================bZIP_DOF                  --------->TGA1a                  --------->bZIP60(1)                  <---------TGA1a                  <---------bZIP60(2)                  <---------bZIP60(1)                  <---------O2                                                       --------->WOX13(1)                  <---------ANAC55(2)                                              <---------YAB1                  --------->ANAC55(2)                                              ------------>CBF <          --------->ZAT14                                                        --------->YAB1     <          <---------At4g35610                                                   <---------YAB1    ---    <------ZmHOX2a(1)      ---------->DOF2                                    --------->YAB1    <---- >ATHB12  --------->At4g35610                                             --------->ATHB12    <------ ----->AGL15      --------->O2       --------->GLK1(1)    >>>>>>>>>TBF1   <--------HAHB4   --------->ARR14(2) ------AGL15 --------->At4g35610 ----------->GT1 <<<<<<<ZML2       <---------ZAT14--------->TOE2(3) -   gagcaaggacagagcagacgacgtgacacaaaagaagggaaatcgaaactagaacaagaagaagaagactgtagaatcatttatcatcaatcgaattcac  6890000                                --------->ARR11(3)                       <---------WOX13(1)                     ------>MYB83            --------->At4g35610 <---------ARR11(1)            <---------At4g35610 <---------ARR11(3)            --------->ZAT2      <---------ARR14(2)        --------->ANAC58        --------->ARR14(2)        --------->ANAC58        <-----------ARR10        --------->ANAC46----------->HVH21      <---------ALFIN1<------------CBF ---------ARR14(2)   ------>MYB46(1)         --------->REM1(1) ---------GLK1(2)  <---------MYB59        <---------MYB52(1) ------>LBD16    ------->TEIL  <---------CCA1(2)  --------->At4g35610                               < -----LBD16<---------TOE2(2)   <---------GLK1(1)  <---------At4g35610                               < -----GT1 <-----------RAV1(2)  --------->GLK1(1) ------->GAMYB                                    --- -------->ARR14(2) --------->TOE2(3)     <-------GAMYB                     <------ZmHOX2a(1)     <---   cggaaactccacgcaggtgaacctaattgacgcatatcttcgccgttacaacagcagacagaatacagagaaacagaggaatagcgaatgtattagtcag  6890100                --------->At4g35610                <---------At4g35610              <--------P             <-------GAMYB            <------MYB46(1)            <---------DEAR3(2)            <------MYB83           <---------MYB46(3)           --------->MYB111(2)           --------->MYB46(2)           --------->MYB59           --------->MYB111(1)          <---------ORA47(1)        <------MYB83        <------MYB46(1)       --------->MYB111(2)       --------->MYB59       --------->MYB111(1)       --------->MYB55(2)       --------->MYB46(2)       <---------AtMYB61       <---------MYB46(3)      <--------P--------->ZAT2      <---------MYB55(1)     <---------MYB52(1)   --------->ANAC58                       --------->STY1(1)               <---------HSFC1(2)   --------->ANAC46                       <---------MYB52(1)              --------->HSFB2a(1)   --------->ANAC58                      <---------SPL7              --------->HSFB2a(2)  <---------LBD16                        --------->LBD16    <------------CBF    ---------->DOF2 ---------ZAT14 <---------ZAT2          <---------ANAC58  --------->ARR11(3) <-------TEIL ---------REM1(2)           --------->MYB59       <---------ANAC46   <---------HSFB2a(2)  <----------ID1 ------>ZAT14<---------MYB52(1)         <---------ANAC46--------->ANAC58  --------->HSFC1(2) ------ZAT6<---------DEAR3(1)           <---------ANAC58--------->ANAC58  <---------HSFB2a(1)   tgttcacggtaggtcggtagctgagaaacttaggtctgtcttccgtagggtttcggataagaaattggaatcgagaaggttcgaaagtagtagcgacaag  6890200                               --------->ANAC58                            ------->TEIL                        <---------ARR14(2)                              <---------REM1(1)   <--------                        --------->ARR14(2)  --------->ALFIN1      <----------DOF2           <--------      <---------At4g35610      --------->ANAC58   --------->GLK1(2)  <-----------RAV1(1)    ---------   --------->LBD16 ----------->GT1       ------>ZmHOX2a(2)       <---------DAG2             ---------  <---------ANAC46--------->GLK1(2)      <---------DEAR3(1)  ----------->HVH21        --------->AtMYB61   ggatgcgcagaagatgggagaatgtgaatcggcaagtaagtgatcggtggagagtctatcgtcgtgaccttttgttgtacctatgcgaccaaagaatatg  6890300                                                                                     --------->ATHB51                                                                    --------------->AGL15                                                                    <---------------AGL15                                                                   <-----------------AGL3                                                                   ----------------->AGL3                                                                   <-----------------AGL2                                                               <----------DOF2       <---------ICU4                                                              ----------->GT1       --------->ICU4                                                              <------NtERF2         <---------YAB1                                                         --------->MYB52(2)    <------MYB83                                                         --------->MYB46(2)    <------MYB46(1)        --------->YAB1                                 <---------MYB52(1)     <---------AtMYB61 -ARR14(2)                --------->ANAC58            <-----------HVH21       <---------MYB46(3) -KAN4(2)                 --------->ANAC46    --------->HSFB2a(2)  ----------------->AGL2 ->TaMYB80                --------->ANAC58   <---------LBD16 ------>NtERF2   <--------P  <---------AHL20(2) >ARR14(2) <------ZmHOX2a(1)      <---------TOE2(3)  -------------->OsCBT  --------->ATHB12         <   cgactgactataaggacccctcaaacttaagccatttatgttttttttgtggaacgcgttaggcgcgttactatatatggttggtcattatttcatttga  6890400                                                 ---------->DOF2            --------->AHL20(2)             --------->AHL20(2)            <---------AHL20(2)       --------->TOE2(3)                  ---------->DOF2      <------ZmHOX2a(2)             --------->YAB1                 ---------->DOF2    --------->At4g35610             ----------->GT1             --------->ANAC58  --------->YAB1     <---------TOE1(3)     <---------AHL20(2)   --------->ANAC58 -----------HVH21    <---------TOE2(3)<---------MYB52(1)        --------->ANAC46   --------->ARR14(2)   actatcagatcagtttaatttctaacgttgttatactatcgttatttaaatgaaagaaccgaatacaagaaaagaaaagcttctgtatcgtcttgctact  6890500  Previous    Next  AGI:  At3g19830.1    Description:  NTMC2T5.2/NTMC2TYPE5.2. similar to NTMC2T5.1/NTMC2TYPE5.1 [Arabidopsis thaliana] (TAIR:AT1G50260.1); similar to C2 domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22937.1); similar to hypothetical protein OsI_009343 [Oryza sativa (indica cultivar-group)] (GB:EAY88110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15404.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 6885612    to: 6889980    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version