Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->LBD16                                                                                 ------>ZmHOX2a(2)                                                                                --------->CCA1(2)                   <-----------GT1                                              <------ZmHOX2a(2)                   --------->YAB1                                              <---------ARR14(2)                --------->YAB1                                                 --------->ARR14(2)                <---------ICU4                                           <---------ICU4               <---------YAB1                                            --------->YAB1               --------->ICU4                                           <---------YAB1             --------->YAB1                                           --------->YAB1             <---------ICU4                                          <------ZmHOX2a(2)            --------->ICU4                                          --------->ARR11(3)            <---------YAB1                                          <---------ARR11(3)     ----------          --------->YAB1                                           =====================HOX2a_HOX2a       ----------->GT1                                             <------ZmHOX2a(1)   ----------->HVH21       --------->ANAC58                                      --------->ANAC58  --------->AGP1       --------->ANAC46                                      --------->ANAC58 --------->At4g35610       --------->ANAC58     --------->At4g35610            --------->MYB52(1)----------->ARR10  -----       --------->ANAC55(1)  ----------->RAV1(2)--------->CCA1(2)   ====================HOX2a_HOX2a   aagaagcacaagtaataataataacaaaacacctgaatttgtgagagagatttgggaagagaaacggaaggatcatcatcagatccgagatgacaaagcg  6855100                                                                     ----------->GT1                                                                <---------RAP2.6(3)                                                                ------>NtERF2                                                                <---------DDF1                                                               --------->At1g77200                                                               --------->DEAR4(1)                                                               ----------->HVH21                                                               <---------ETT(1)                                                               --------->RRTF1(3)                                                               --------->RAP2.6(2)                                                               --------->DEAR3(1)                                                               --------->RAP2.3(2)                                                               --------->RAP2.3(3)                                                               --------->RRTF1(2)                                                               --------->DREB2C(2)                                                              --------->ORA47(2)                                                              --------->DEAR3(2)                                                              --------->ERF1                                                              --------->RAP2.3(1)                                                              <------NtERF2                                                              --------->RRTF1(1)                                                              --------->ATERF1(1)                                                             ------>NtERF2                                                             --------->ABI4(1)                                                             <---------ATERF1(1)                                                             <---------At4g35610                                                             --------->At4g35610                                                            --------->RAP2.6(2)                                                            --------->RAP2.3(2)                                                            --------->RAP2.3(3)                                                            --------->RRTF1(2)                                                            --------->RRTF1(3)                                                            --------->ATERF1(2)                                                            --------->DEAR3(1)                                                            <---------ATERF1(2)                                                            <---------DEAR3(1)                    <---------------AGL15                  --------->RAP2.3(1)                    --------------->AGL15                  --------->ERF1                   <-----------------AGL3                  --------->DEAR4(2)                  --------->SPL7                      --------->ARR14(2)               ------>ZmHOX2a(2)            <---------O2   --------->ORA47(2)              --------------->AtSPL3        <---------TGA1a--------->ATERF1(1)              <---------------AtSPL3        --------->TGA1a--------->RRTF1(1)              --------------->AtSPL8        --------->O2  ------>NtERF2             --------->ARR14(2)            <------NtERF2  <---------RAP2.3(1)             <---------ARR14(2)           ------>NtERF2   <---------ATERF1(1)                      --             <---------ARR11(3)          ----------->HVH21--------->LBD16                        <---          <---------TOE2(3)             --------->SPL7<---------ARR14(2)                    ---------  ----------->HVH21<-----------------AGL2--------->DEAR3(1)--------->RAP2.6(1)             <---------ARR11(3) >DOF2<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->DEAR3(2)<---------At4g35610              --------->ARR11(3) ---->LBD16 <------ZmHOX2a(1)          --------->At4g35610--------->At4g35610   <-----------GT1  ----   ggaattgacactgaggatcgtacttcatatggagagtaatcggccgacgagtcttggttccgccgccgacatggttaaattgaaaccccataagagcttc  6855200                                                 --------->ABI4(2)                                                 <---------MYB46(3)                                               ------->PIF5                                               <-------PIF5                                               <---------MYB52(1)                                              --------->LBD16                                             <---------ATERF1(2)                                             <---------DEAR3(1)                                             --------->ATERF1(2)                                             --------->DEAR3(1)                                         --------->DEAR3(2)            <---------At5g28300  --------->AtMYB61        <---------DAG2          --------->MYB46(3)            --------->ATERF1(1)        <----------DOF2       <---------ALFIN1<---------DEAR3(2)    <---------ZAT14        --------->PCF2--------->MYB46(3)   <------NtERF2        <---------ANAC58    --------->ZAT18    <---------ZAT2  --------->ARR14(2)    ------>NtERF2 --------->ANAC46    <---------ZAT18    --------->ZAT2  <---------ARR14(2)   <---------ANAC58       <---------ANAC46    --------->ZAT14    <---------At4g35610--------->DEAR3(1)<---------DEAR3(1) ---------->DOF2 -------->DOF2         --------->At4g35610------->GAMYB     <---------ANAC58------>NtERF2           < ------HSFB2a(2)  <---------DEAR3(2) --------->ANAC58   --------->SPL7   ------>ZmHOX2a(1)          < >At4g35610<-----------GT1<-----------HVH21--------->MYB52(1)<---------ATERF1(1)   <---------ANAC58 - ----->HSFB2a(2)<---------MYB52(1)   --------->ANAC58 <---------SPL7   ----------->RAV1(2)          -   cacaagcgcacttttaccgtcggtctgctgtcccaccacaagaaccgccggtgcttcgaacggcgtctccaattcctgcgccaaagcgtgtaactcgttg  6855300                                                              ------->GAMYB                                                              --------->ANAC46                                                         ------>ZmHOX2a(1)                                                ------>NtERF2--------->MYB46(3)              <---------ZAT14                   --------->LBD16       ---------->DOF2                         --------->ANAC46       <---------GLK1(2)  --------->DEAR3(1)    <---------ANAC46                           --------->ANAC58<-----------TGA1        ------>NtERF2   <-------TEIL<---------ALFIN1       <---------SPL7 --------->ARR14(2)                --------->LBD16 ---------At4g35610              <------NtERF2 --------->ANAC58<-----------HVH21      --------->ANAC58 ---------HSFC1(2)--------->DEAR3(1) --------->DEAR3(1) --------->TOE2(3)             --------->ANAC58 -------->At4g35610     ------>ZmHOX2a(1) ------>ZmHOX2a(1)  <------------AtMYB77     --------->ANAC46 -------->HSFC1(2)<---------ALFIN1--------->DEAR3(1) <---------ARR14(2)    <---------At4g35610<------   taagcttcgtaaagactccaccgctcctcaatcgcagcgtcgtcctcttccgccatttcctcaaccgtcaccgattttgctgatacttccgccatcgtct  6855400                                                                               <----------DOF2                                                                               <---------DAG2                                                                           <---------ARR14(2)                                                                           <---------MYB52(1)                                                                        <------NtERF2                                                                       ------>NtERF2  --------->LBD16                                                                      --------->DEAR3(1)                                                                      <---------DEAR3(1)  --------------->AGL15                                            <---------ANAC58   ------>NtERF2 --------->ANAC58                                                  <---------ANAC58 <---------LBD16 --------->ANAC58                                          --------------------->WRI1--------->ANAC46 ---CCA1(2)      <------ZmHOX2a(1)                        <----------DOF2--------->DEAR3(1)   cttacgaaaatgagcaagaggaagagtaagagtaagagagtgtctcttatttcttctactctttagttttcgtcgccgttcctttttccgccatggaatt  6855500                                                                                 <---------TOE2(3)                                                                                <---------DOF5.7(2)                                                                         <----------CDC5                                                                       <------NtERF2                                                                      ------>NtERF2                   *TSS                                              <---------ANAC58      ----------->GT1                                                <---------ANAC58    <-------TEIL  <---------DAG2                          --------->ANAC58     <---------WRKY45    --   --------->ARR14(1)              --------->AHL20(1)     --------->ANAC46     <---------WRKY12    --   --------->CCA1(2)               --------->ARR11(3)     --------->ANAC58     <---------WRKY38(1) <-  --------->ARR14(2)               <---------ARR11(3)   --------->ANAC58<----------DOF2           ---  --------->ARR11(1)               <---------AHL20(1)   --------->ANAC58<-------GAMYB            <---  <---------ARR14(2)       ---------->DOF2       <-----------GT1     <---------ANAC46  <---------YAB1   agcagatacggctaatttcaatttttgtcaaaagaaatattttttgtgttttaatctcacgcgcatccatggcgcgttgagtcaacgttgtaatagttct  6855600                                                          ----------->GT1                                                          <---------DEAR3(2)       <---------ANAC58                                                         --------->ETT(1)--------->GLK1(1)                                                        <---------ORA47(1)    <----------DOF2             ---------->DOF2                         <---------AtMYB61   <---------GLK1(1)       <---------AHL20(2)                 <---------RVE1(1)             <---------ARR14(2)       --------->AHL20(2)                --------->ARR11(3)            <------ZmHOX2a(1) ------->LBD16             <------ZmHOX2a(1)<---------AHL20(2)       <---------TOE2(3)<---------WRKY18(1) ------->At4g35610      --------->SPL7   <---------ARR11(3)<------NtERF2--------->ARR14(2) --------At4g35610   --------->ANAC58   <------ZmHOX2a(1)<---------DEAR3(1)  <---------ANAC58   <---- ------>ANAC46       --------->ANAC58 <---------TOE1(3) --------->RAP2.6(3)  <---------ANAC58   ----- ------LBD16--------->AHL20(2)        <---------TOE2(3) <---------------------WRI1 <---------ANAC58   ccgctaaatttaaataaaagagcgcgtaaggagagagtttaaggattttttttttttggtcggcaaatacaaaggatttgctttgtcttgaccaatagta  6855700                                                      <---------ICU4                                                      --------->ATHB12                                                     <---------YAB1                          <---------YAB1             --------->ICU4                      <---------GLK1(1)           <---------YAB1                     <---------ARR14(2)         ----------->GT1                     --------->ARR14(2)      <---------GLK1(2)                          ----------->HVH21             --------->TOE2(3)           <---------ZAT14                    --------->ARR11(3) -----ARR14(2)      <------ZmHOX2a(1)    --------->ZAT14                    <---------AHL20(1) ---->ARR14(2)  ---------->DOF2      <---------------AtSPL8                 --------->AHL20(1)  -----   tatgcagaaatattatctcaaaggatttgtgataactatgtagtacagaattgtgattattggatgagaaaccagaaatattttgagcaaatgacgactt  6855800                                                   <---------YAB1                                                  --------->AHL20(2)                           <---------ARR11(3)     <---------AHL20(2)          --------->ANAC58                           --------->ARR11(3) --------->YAB1                  --------->ANAC58             <-----------GT1                  --------->ATHB12       <---------YAB1    <-----------GT1 --------->TOE2(3)        <---------YAB1        <----------DOF2 --------->ANAC58   --------->AHL20(2)  ---------->DOF2       --------->ICU4       <---------ANAC46 --------->ANAC58 ------>GT1<---------AHL20(2)             --------->ICU4     ----------->GT1<-----------GT1 <--------   gttaatttactattttttcatttcttaaaggtctctcttgtgtaactatgattaaaattgaaatagtgacttttattgttacgacatggaacaaatcaac  6855900                                                        ---------->DOF2                                <-----------GT1        <---------RAP2.6(3)                             ----------->GT1 <---------ANAC58                     ------>ZmHOX2a(1)                            ------->TEIL     <---------ANAC46              --------->PCF2      <---------ZAT6   --------->YAB1        <---------ANAC58              <---------TCP15(1) <------ -ATHB12  ---------->DOF2<---------YAB1 <-----------RAV1(1)               <-----------HVH21   <------   gagttctattgttaaagagagacattgatgaatgtaacaaaactgtggcttagaagccgaaaggagacttagttcgggtccctccttcaccgtattgctc  6856000  Previous    Next  AGI:  At3g19720.1    Description:  ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase. similar to dynamin family protein [Arabidopsis thaliana] (TAIR:AT1G53140.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ53701.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83976.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43405.1); contains InterPro domain Dynamin, GTPase region; (InterPro:IPR001401) Range:  from: 6850377    to: 6855519    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g19740.1    Description:  ATPase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50140.2); similar to ATPase [Arabidopsis thaliana] (TAIR:AT1G50140.1); similar to hypothetical protein OsI_021458 [Oryza sativa (indica cultivar-group)] (GB:EAZ00226.1); similar to hypothetical protein OsJ_019820 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36337.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42023.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 6855843    to: 6863532    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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