Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <------MYB83                                                                              <---------MYB46(3)                                                                              <------MYB46(1)                                                                             <---------AtMYB61                                                                             <---------DEAR3(1)                                                                 <---------DEAR3(2)                                                                 <------MYB83--------->ALFIN1                                                                 <------MYB46(1)                                                                 <---------MYB46(3)                                                                <---------AtMYB61                                                                <---------DEAR3(1)                                                   <----------TaMYB80     --------->MYB55(2)      ---                              <---------WOX13(1)  <---------ARR14(2)      <---------MYB46(3)   <-----                            --------->ATHB12      --------->ARR14(2) <------NtERF2          ------->GAMYB                --------->ATHB12     --------->GLK1(2)         <---------MYB52(1)         --------->ANAC46 ->YAB1        <-------TEIL<---------YAB1         ---------->TaMYB80------>NtERF2       ---------->DOF2   aacatggtccaagtagattcatttggactgtgattggaggttctatcggcagtatatgcctctacgttggtgccatcgggtggtgcaagtacaagcgcct  6823100                                                                                           ==========                 ----------->RAV1(1)                                                       ==========                --------->MYB46(3)                                                         ------>ZmHOX2a(1)               ------>MYB83                                                               --------->TOE2(3)               ------>MYB46(1)                                                         <---------ARR14(2)              ----------->RAV1(1)                                                      <---------ARR11(3)             --------->AtMYB61          <-----------RAV1(1)                            --------->ARR14(2)         --------->WRKY38(1)          --------->YAB1                         <----------DOF2         <---------ETT(2)             <---------ICU4              --------->At4g35610 <---------CCA1(2) ------------------>WRI1        <------ZmHOX2a(1)                 <---------At4g35610 <---------GLK1(1) -----DOF2  --------->MYB46(3) ----------->GT1                   <---------TOE1(3)   ------->TEIL   tcttgaatgagtcgaccaacaacatattgggagaggagaataatgtcgcattgccacaaatctatttaagctaacaagacttttatgtatatcctttgtt  6823200             --------->ZAT14         <-----------GT1       <----------DOF2      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR11(3)    <---------ARR11(3)    --------->GLK1(2)    --------->ARR14(3)    <---------ARR14(2)    --------->ARR14(2)                                                 ---------->DOF2    <---------ARR14(3)            --------->ANAC46                    --------->AHL20(2)    <-----------ARR10          <-----------GT1                    <---------AHL20(2)                <   <------ZmHOX2a(1)          <-----------GT1                    --------->AHL20(2)                 < ============HOX2a_HOX2a<----------DOF2             <---------AtLEC2  <---------AHL20(2)            < ===========HOX2a_HOX2a--------->TOE2(3) ------>ZmHOX2a(1)<----------DOF2                 <----------   cttgaggatctttactactctcaaacctttttttatccgtctccttcactatttgcatttctttcgatttaataaaagagcaaattgcatagtttccttc  6823300                                                                             <---------ZAT18                                                     --------->YAB1          --------->ZAT14                                                    <---------YAB1           --------->ZAT18                                              <---------ARR14(2)             <---------ZAT14                                              --------->ARR14(2)    ------>ZmHOX2a(2)                                            --------->LBD16       --------->ARR14(2) ---------ANAC58                --------->ATHB12 <---------AHL20(2)<------ZmHOX2a(2) ---------ANAC46        --------->CCA1(2) <---------LBD16         <---------ARR14(2) ---------ANAC58       --------->ARR11(3)--------->MYB52(1)       --------->ARR11(3) -GT1                 <<<<<<<<<RAP2.2   <---------ARR14(2)        <---------ARR11(3)   ttgcttatttcgacatcaaaatttagatatagactgattagagaaccggattttataatggtatcgcagatcgtttctgtgcacaattctaacttatggg  6823400                                                                                                 <---                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ======                                                                                               <-----                                        <------------CBF                                       ------                                  ----------->GT1                                              <-----                              --------->ARR14(2)             ----------->HVH21                <------                              <---------ARR14(2)    <-----------GT1                        <---------                             <------NtERF2       <------------CBF ----------->GT1       <---------ATERF1(2)                            --------->LBD16   <------ZmHOX2a(1) <---------ANAC46  ===================                          <---------LBD16   <---------TOE2(3)----------->TGA1     <-----------RAV1(1)     <---------YAB1     --------->DAG2 --------->ICU4------------>CBF         --------->AHL20(2) ----   gttttttctgatacttgaagaaatataaggcggaaactgtaatattgaggaaattgacaatttctgacgggaaaattagataaaatgttgcaggcaggcg  6823500                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               >>>>>>                                                                                      --------->TGA2(2)                                                                                      ----------->HVH21                                                                                     <-----------HVH21                                                                                     <-----------TGA1 ---NtERF2                                                                          --------->bZIP60(1) ----ANAC58                                                                         --------->bZIP60(2) ----ANAC46                                                                         <---------TGA1a ----O2                                                                             --------->ANAC46 ========================bZIP_DOF                                                   --------->O2 ----ANAC58                                                                         <---------O2 --->ALFIN1                                                  =================================bZIP_DOF ----TGA1a                                                   ---------->DOF2        --------->TGA1a -----------------TaNAC69(2)                     <---------ETT(2)                   --------->ANAC58 --RAV1(2)    *TSS                               --------->ETT(2)                  <-----------STF1 ==RAV  <-----------------------TaNAC69(2)      --------->DDF1          <-------TEIL--------->ANAC58 ----->ALFIN1 ---------->DOF2   <---------DEAR3(1)  <---------O2       --------->GLK1(2)       ------   tgggaagagagaagagcaaagccctaaaatttcttcggtgagagaaacatgtcgacgaggcgagaaagcagagattcagaccctagacgtcaccgttcta  6823600          ------->TEIL       --------->LBD16      --------->HSFB2a(2)   <---------HSFB2a(2)     ------>ZmHOX2a(2)      --------->HSFB2a(2)                               <---------AHL20(2) ----HSFC1(1)          <<<<<<<<<TBF1                                         <---------AHL20(1) ----HSFB2a(2)  --------->ARR11(3)       <----------DOF2                     --------->AHL20(2) --->HSFC1(1)   --------->ARR14(2)    ------>ZmHOX2a(1)    --------->YAB1    --------->AHL20(1) >ZML2<---------HSFB2a(2)  <---------LBD16    --------->YAB1     <----------DOF2 --->HSFB2a(2)  <---------ARR11(3)--------->GLK1(2)       <---------YAB1     <---------AHL20(2)     <   gaatcgatcgcgaacccaggtcttcttcttctggagattcctgctctatcttcatcttctattataactttgaagcaaataaaattcggttttgaacaac  6823700                                                                                            ---------                                       <---------At4g35610                             <---------At4g35610                                       --------->At4g35610                            <---------AGP1                      --------->HSFB2a(2)                                       <---------TOE1(2)               <----------DOF2      ---------->DOF2                             <---------TOE2(2)   --------->At4g35610<---------HSFB2a(2)                    <---------WOX13(1)================HOX2a_HOX2a   <---------At4g35610--------->HSFC1(1)                   --------->ATHB12    ------>ZmHOX2a(1) ------ZmHOX2a(1)     <---------HSFC1(1)          <---------ZAT6          --------->YAB1------>ZmHOX2a(2)   gaggaagctcatagtgtcttttgtctagaaatcgaaatgaaagctgaatttagtgttgaagtgattgttttttgaatcatcctatgttgatctgtctact  6823800                               <---------ARR11(3)                                          --------->YAB1                               --------->ARR11(3)                                         <---------YAB1    <------MYB83             ----------->ARR10            --------->ATHB12            <---------ANAC58    <------MYB46(1)       --------->ALFIN1               <---------ZAT6               <---------ANAC58   --------->MYB59<---------HSFB2a(2)                 <-----------GT1                <---------At4g35610 >ZAT14           --------->HSFB2a(2)        ----------->GT1                       <--------P   ctaatttggtcacattcactctcgaacagtggagatttttctgaagatggtcaattttactgataggcacaattagttgattttggtagcttatcacagt  6823900              <---------TOE2(3)         <--------HAHB4         --------->ATHB12                                       --------->At4g35610         <---------ICU4                                         <---------At4g35610        --------->ICU4                           --------->CCA1(2)                       <---------ARR14(2)        <---------ATHB12               --------->ARR11(3)  --------->TOE1(3)             --------->ARR14(2)    <---------MYB52(2)   <----------DOF2<------ZmHOX2a(2) ----------->RAV1(2)           <------ZmHOX2a(1)   tgtacaactaatcatttatgtttttgtctttagccctaagagatcaagaagagatggcaaacctgaagctgaacgagttctgagtaagaaggatttggat  6824000  Previous    Next  AGI:  At3g19640.1    Description:  magnesium transporter CorA-like family protein (MRS2-3). similar to magnesium transporter CorA-like family protein (MRS2-1) [Arabidopsis thaliana] (TAIR:AT1G16010.1); similar to magnesium transporter CorA-like family protein (MRS2-1) [Arabidopsis thaliana] (TAIR:AT1G16010.2); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ48985.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) Range:  from: 6820932    to: 6823312    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g19650.1    Description:  cyclin-related. similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT1G20920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63975.1) Range:  from: 6823514    to: 6825267    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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