Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------MYB52(1)       --------->TOE2(3)                                                                           -- ------->ANAC58                                                                                   <-- ------->ANAC58                                                                                   --- ------->ANAC46                                                                                   <-- ----->ANAC46                                 <----------DOF2             <---------TOE1(2)      ---- -----REM1(2)            ----------->GT1  <---------ANAC58         --------->DAG2                <--- ---ARR14(2)         <-------TEIL     <---------MYB52(1)         ---------->DOF2                 <--- -->ARR14(2)<---------ZAT6 ----------->GT1<---------ANAC58<---------HSFB2a(2)<----------DOF2     ----   cacgactacccttagtgtaaacatacatggtgaaaaactcgttggcttctttcaagaagtcgcgaagaaaaggtcgtagctttgtcaaaaattccatggg  6809100             --------->ARR11(3)             <---------ARR11(3)           ----------->ARR10         <----------DOF2    --------->SPL7   ===================HOX2a_HOX2a   ------>ZmHOX2a(1) ---->ZmHOX2a(2) -------GLK1(1)                      --------->At4g35610 ------>GLK1(1)              <<<<<<<<<NAM                              <---------ANAC58 ----ZmHOX2a(2)          <---------ATHB12       <----------DOF2        <---------ANAC58        ------ ----->ARR11(3)    --------->TOE2(3) <---------At4g35610              <---------ZAT2         -------- ------ARR14(2)    --------->HSFB2a(2)       --------->ANAC46         --------->ZAT2      --------->TOE1(3) ------ARR11(3)    <---------HSFB2a(2)    ------->TEIL      <---------GLK1(2)             --------->TOE2(3) ----->ARR14(2)------>ZmHOX2a(2) <-----------RAV1(1)      ----------->ARR10               --------->YAB1   atctcctacggctttgatcttccataaatcatcccttgttgctgaacccgcttcttcgattagatacttctctgcttgggagagacttggaaccataaca  6809200                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                           <---------ALFIN1                                                                                         ----------->RAV1(1)                   --------->ANAC46                                                      <---------ALFIN1            <---------AtMYB61                                                         --------->ANAC46        <---------ANAC58                                                              --------->ANAC58        <---------ANAC46             --------->HSFC1(2)                ---------->DOF2--------->ANAC58        <---------ANAC58             <---------HSFC1(2)           <-------GAMYB     <---------DOF5.7(2) --->ZAT6 --------->ALFIN1       --------->ALFIN1         --------->ARR11(3)       <---------WRKY38(1) ->MYB52(1) --------->ALFIN1     <---------REM1(1)        <---------ARR11(3)      --------->DOF5.7(2)   gtatggagaagcgtgtggtccaagtcaagtacaaggtgaagcttcttctcgttgagacaagataatttcgttgtaaagcacttggttaacgccacagctt  6809300                                                                                      ----------->HVH21                                                                                     <-----------HVH21                                                                                     --------->LBD16                                                                                    --------->ANAC55(2)     --------->MYB52(2)                                                             <---------ANAC55(1)  <---------ANAC58                                                                  <---------ANAC55(2)  <---------ANAC46                                                                  <---------ANAC58  <---------ANAC58                                                              <---------GLK1(2) ------ANAC46                                                                   --------->ARR14(2) ------ANAC58                                                                   <---------ARR14(2) ------ANAC58                                                                  <---------At4g35610 ---TEIL                                                                 --------->At4g35610    ----- ---GLK1(2)               <---------YAB1------>NtERF2  <-----------GT1<---------At4g35610    <------- --ZAT2                   <---------AHL20(2)    <----------DOF2       ------>NtERF2 <---------ANAC46 ->ZAT2                  --------->AHL20(2)    <---------ANAC58       --------->At4g35610  --------->At4g35610 --At4g35610             <---------AHL20(1)    <---------ANAC58--------->ARR14(2)   <---------ANAC58 ->At4g35610             --------->AHL20(1)   ---------->ID1   <---------ARR14(2)--------->GLK1(2)   cgtggcttagttgtaaaccgtcgaaaatataatcgaatgctcggccttggctttttttcacagtcgatttgcagccgatgcagattccgtgacagatgta  6809400                                                             <----------DOF2                                                          <---------ARR11(3)                                                    --------->MYB55(2)                                                    <---------MYB46(3)                                                    <------MYB83                                                    --------->MYB52(2)                                                    <------MYB46(1)                                                    <---------DEAR3(2)                                                   <---------TOE2(2)                                                   <---------TOE1(2)                                                  <---------MYB52(1)                                                 <-------GAMYB  <---------ANAC58                          <---------TOE2(3)     <---------MYB46(3)         <----------DOF2                         <---------DOF5.7(2)    ------>ZmHOX2a(2)         <---------ANAC58                         --------->MYB52(1) --------->WRKY12------>ZmHOX2a(2)              <---------------AGL15  ==============================HOX2a_HOX2a     --------->AtMYB61<------ZmHOX2a(1)     --------->WRKY38(1) <---------ANAC58 ----------->HVH21    =================================HOX2a_HOX2a        <---------ANAC58 -->TEIL      --------->HSFB2a(2)    ==================HOX2a_HOX2a  <----------DOF2          <------- --REM1(1)    <---------HSFB2a(2)    <------ZmHOX2a(1)    --------->ARR11(3)         --------->LBD16   ccagtgaccacaactactagaagaggataacgatgaagaggactcgttgatcgttggttcgatctttcgtcttttggcttttggttccgaagaaaaattc  6809500                     <------------CBF                 <---------ZAT6    <-----------GT1                                              -----   --------->ZAT14 <---------YAB1 --------->AHL20(2)            <------ZmHOX2a(1)              <----- --GLK1(2)   <--------P --------->YAB1            ---------->DOF2                <---------ZAT6<-----   tcaactacagacatggttagtcttattgataaacaaataactaatttgataagaaagctagacagaggaagagagagagattagtgtttgtctgtttgag  6809600                                                                                  ------>MYB46(1)                                                                                  ------>MYB83                                                                                --------->AtMYB61                                                                                <---------MYB59                                 <---------ANAC55(2)                       ------>ZmHOX2a(1)       <-                                 <---------ANAC46                     --------->GLK1(1)   <----------DOF2                       --------->ANAC58                               <---------GLK1(1)   ===========      <------ZmHOX2a(1)--------->ANAC58     <----------ID1          <------ZmHOX2a(1)<---------MYB59 ------>GT1        <---------ANAC58    <---------AHL20(2)         <---------TOE1(3) ----------->RAV1(2) ----TOE2(3)       <---------ANAC58  <-----------TBP              <---------TOE2(3)-------->P    <--- ----TOE1(3)    --------->GLK1(1)--------->ANAC55(2)   <-----------HVH21  --------->TOE2(3)      ----   gttaaacaggaactcgtgatttcttacgcctagtctcgtatttatagggacagagaccgtcatagattaaggaaatcctaaacctaacctgactttgttc  6809700                                      <----------DOF2                                     <---------DAG2                               <-------MYC3                               ------->MYC3                              --------->O2                              <---------TGA1a       <---------MYB52(1)               <---------YAB1                              --------->TGA1a       <----------DOF2           <---------WOX13(1)  <--           <---------ICU4     ===================bZIP_DOF                   <---------ICU4    -------   <---------WOX13(1)         <---------O2      --------->ZAT18             --------->ATHB12  -------  <------------CBF            ===================bZIP_DOF   --------->TOE2(3)<------------CBF<------- --------MYB52(1)      <---------ANAC58     <---------HSFB2a(2)            --------->ICU4    <------- =======================================bZIP_DOF<---------ZAT18            <---------YAB1    -------- ------HSFB2a(2)       <---------ANAC58     --------->HSFB2a(2)         <---------YAB1--------->YAB1 ----->HSFB2a(2)      <---------ICU4----------------->AGL1 <---------YAB1--------->YAB1 <-----------GT1   tggtaattgaccattatgccctcatacttgccacgtttgcctttttcgagagccctttgttatcttagtattttctgataattgactattataccattat  6809800                                                                                            ---------                                                                                         ----------->GT1      <----------DOF2           --------->YAB1     --------->RVE1(1)            <---------AHL20(2)    ------->TEIL               <---------YAB1     <---------ARR11(3)            <---------YAB1  <---------ZAT18            <---------ICU4       --------->GLK1(2)            <---------AHL20(2) -------AHL20(2)            --------->ICU4        --------->ARR11(3)           --------->AHL20(2) -->ATHB51                  <---------YAB1       --------->RVE1(1)          <---------AHL20(2) -->AHL20(2)              --------->YAB1      --------->AHL20(2)            --------->AHL20(1) --MYB52(1)               <--------HAHB4      --------->YAB1                <---------AHL20(1) --YAB1                   <---------ICU4   --------->YAB1        --------->AHL20(2)      <---------ZAT6 ->ICU4                  <---------YAB1   <---------AHL20(2) ----------->GT1--------->AHL20(2)   tttatgcactttctactgatttagagcatcattatcatgggtatataataaaaatctcttaagagataaaaatactaatattttaattctacagttaaat  6809900                                                                <---------ANAC58                                                                <---------ANAC58                                                               ---------->ID1                                                              <-----------GT1                                                          <---------RVE1(1)                                                          <---------CCA1(1)                        <-                                                         <---------ARR11(3)                      ----                                     <---------YAB1      --------->ARR11(3)                      <---                                  <---------YAB1         <---------GLK1(2)                       ----                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                            <---                 --------->DAG2 ----------->GT1         <---------RVE1(1)                    --------                ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <-------    <---------ATHB12      <---------MYB52(1)     <---------At4g35610           <----------DOF2  ----- >AHL20(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->At4g35610    <----------DOF2      <-------   aaaccaataactggattataaagtgtctcttagtttgttattatgtctcttagctaagagattttttcgtttctctttcttctttctcttaagttttaat  6810000  Previous    Next  AGI:  At3g19595.1    Description:  phosphoprotein phosphatase. similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT2G04930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47916.1); similar to Os05g0390500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055440.1); contains InterPro domain NLI interacting factor (InterPro:IPR004274); contains InterPro domain FCP1-like phosphatase, phosphatase domain; (InterPro:IPR011947) Range:  from: 6808591    to: 6809514    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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