Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <----------DOF2                                              --------->ZAT2                                              <---------At4g35610    <---------GLK1(2)                         <---------ZAT2  --------->ANAC46                        <-----------HVH21                               >>>>>>>>>ARR2 --------->RAV1(1)                  ----------->RAV1(1)                <---------At4g35610>>>>>>>>>ARR1 ----TEIL                        --------->ANAC58                <---------ANAC58       <---------YAB1 ->DAG2                          --------->ANAC58                <---------ANAC58     <---------DOF5.7(2) >DOF2                     --------->MYB52(1) --------->At4g35610<---------ANAC46   --------->DOF5.7(2)   ccaccagaaacttcatagaagatgagaaataccagaggcaacagtgtcagctttggacttggttttggcttagagctgttttcatcgtttacgattgtct  6792500                         ----------->RAV1(1)                                               <---------GLK1(2)                        --------->DEAR4(1)                                                 --------->ARR11(3)                        --------->DEAR3(1)                <<<<<<<<<WRKY18      <----------DOF2                        --------->DREB2C(2)         --------->GLK1(2)      --------->ARR11(3)                   --------->ARR11(3)    <---------At4g35610               <---------ARR11(3)    <---      --------->MYB46(3)--------->At1g77200     --------->At5g28300        <---------GLK1(2)---------     --------->ANAC46   ----------->HVH21--------->At4g35610           ---------->DOF2     <---------ARR11(3)   cttcttcacccatcaaacaaatatcaccgacagagagacagagagctctcggtgattctgtcaaaaacaaacaaaaagatacttttcagtagagattttg  6792600                          ------>ZmHOX2a(1)                                        <---------ARR14(2)                         --------->TOE2(3)                                         --------->ARR14(2)                     <----------DOF2                                              <------ZmHOX2a(1)                     ------>ZmHOX2a(1)                                         --------->At4g35610         --------->AHL20(2)                                                    <---------At4g35610 ------AtLEC2   --------->WOX13(1)  --------->TOE2(3)                      <-----------HVH21 >GLK1(2)--------->YAB1  --------->TOE1(3)           <----------DOF2    ---------->DOF2           ---   gatggattcaataaaaatcaatcctttccttaagaaaacatcaaaaatttagagactttagaaagtctctgttcaaaagtcagaggaattgcaaaacaga  6792700                    <---------ARR14(2)                    --------->ARR14(2)                  <------MYB46(1)                  <---------MYB46(3)                                   <---------GLK1(1)                  <------MYB83                                         --------->GLK1(1)                 <---------AtMYB61                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                 <---------DEAR3(1)                         <------MYB83------>ZmHOX2a(2)                 --------->ALFIN1                           <------MYB46(1)         <---------ATHB12                               --------->At4g35610       --------->WOX13(1)                               <---------ZAT2------->TEIL      --------->AHL20(2)                                --------->ZAT2<---------AGP1      <---------AHL20(2)    <---------HSFB2a(2)         <---------At4g35610  <---------AtLEC2       <     --------->AHL20(2)     --------->HSFB2a(2)       <---------ZAT18 <---------ARR11(3)        ----- -------->GT1 <---------MYB46(3)     <-----------GT1  --------->ZAT18 --------->ARR11(3) <----------DOF2   gtgtcaaattaatcaatgggtggttctgttcgagagaattaacctgtagatcgaagtgagcttggtacaatggatctctgaatggctctctctttctctg  6792800                                                                                       <---------ANAC58                                                             --------->At4g35610       <---------ANAC46                                                           --------->YAB1              <---------ANAC58 ------->TEIL                                <---------At4g35610             ----------->GT1 -----------GT1      --------->At4g35610     --------->At4g35610     <-------TEIL   ----------->TGA1 ---->At4g35610    <------ZmHOX2a(1)  --------->ICU4      <---------YAB1  --------->ATHB12   atgaacccttcaaaattggaaggagatgaaattgactggaaagattaagctgaacaagttatcatctcagattcaaagattggaaaatgacgtttgatca  6792900                                                                     ------->MYC3                                                                     <-------MYC3                                                                    --------->PIF3(3)                                                                    <---------PIF3(3)                                                                    --------->TGA1a                                                                    <---------TGA1a                                                                    --------->O2                                                                    <---------O2                                                                  <---------ALFIN1                                                                  ----------->RAV1(1)                                                                <-----------------PIF3(1)                                                                ------>NtERF2                          <------NtERF2                        --------->ANAC46                         <---------SPL7                        --------->ANAC58<---------ALFIN1                         *TSS<------ZmHOX2a(1)                 --------->RAP2.6(2)   <---------YAB1<---------YAB1                                --------->ANAC58--------->AtMYB61  <---------ARR11(3)    <---------ANAC58                  ====================bZIP_DOF --------->ANAC46  --------->ARR11(3)    <---------ANAC58                  ---------->DOF2      --------->ZAT6 --------->CCA1(1)      <---------ANAC46               --------->ANAC55(2)    --------->MYB46(3)    - --------->RVE1(1)--------->ATHB12                     <---------ANAC55(2)  <---------ALFIN1<--------   aaaatatcattgtatagttgttattggcgtaggacttggacttgcattagttttgttaagtaaagacgccacatggctccaccactactaccccatcact  6793000                                                                          <---------AHL20(2)                                                                       <---------AHL20(1)                                                                       --------->AHL20(1)                                                                       <---------AHL20(2)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                      --------->YAB1      -----------                                                                  --------->AHL20(1)   <-------MYC3                                                                  <---------AHL20(1)   ------->MYC3                                                                  <---------AHL20(2)  <---------TGA1a                                                               --------->ATHB51       --------->TGA1a                                                               <--------HAHB4         --------->O2                                                              <---------ATHB12        --------->ANAC55(2)                                                              --------->AHL20(2)      <---------ANAC55(2)                        <---------MYB52(1)    <---------YAB1  <---------ATHB51        <---------ANAC46                  <---------ANAC58           <---------ARR11(3)<---------ICU4     <-----------HVH21             <----------DOF2                --------->YAB1    --------->ICU4<---------AHL20(2)             <---------DAG2      <---------YAB1--------->ATHB12--------->YAB1<---------YAB1   <------ -------->ANAC46  <---------ANAC58--------->YAB1--------->TOE2(3) --------->AHL20(2)  <---------O2 -ATHB12 <---------WRKY12      --------->YAB1--------->ARR11(3)<--------ATHB1<---------AHL20(2)   ctacgacttcgtcaacttttgcttcccttgttttcatgataaacaaatatcattagtctatacaataattaattatatttttattgtcacgtgaagtaca  6793100                                                        <-------MYC3                                                        ------->MYC3                                               -------->P                                               ------>MYB83                             <-------GAMYB                                              --------->ORA47(1)           --------->KAN4(2)                                             --------->DEAR3(1)           <---------HSFB2a(1)             --------->ZAT14                 ------->GAMYB<-------TEIL    <---------HSFC1(2)           --------->At4g35610              --------->DEAR3(2)            --------->HSFB2a(1)           <---------At4g35610              --------->MYB46(3)            <---------KAN4(1)           --------->ZAT2                   <------------AtMYB77          --------->HSFC1(2)           <---------ZAT2--------->AtLEC2 --------->MYB52(1)              --------->KAN4(1) ---->AtSPL3 <---------ZAT14     <---------SPL7------>MYB46(1)           <---------KAN4(2)         <- -TEIL  <---------At4g35610      <-----------HVH21 <-----------HVH21     <---------TOE1(2)   --------   ttttcggtttagcagctcactggctccatgaagactgtccggtctaaccgaccagtcacatgcattacatcgtcgaatgttctctcttgctgttgtaaag  6793200                                                                     ------>ZmHOX2a(1)                                                           --------->GLK1(2)                                                          --------->YAB1                                                         <---------ATHB12       <---------ANAC58                                                     =======================HOX2a_HOX2a    --------------->AtSPL8                           <------ZmHOX2a(2)          <---------ANAC58 <------NtERF2                                      <---------ARR11(3)   <---------TOE2(3) --------DEAR3(1)                    ---------->DOF2--------->ARR11(3)  <-----------GT1 -->DOF2                         <----------ID1    --------->GLK1(1) <----------DOF2          <------   gtcgtcgtagtactatatatgtctaatcgcctatggagccaaaggaaacaaggagatcaataatctgtgtcctttaacattttcttgcatcatctccttt  6793300                                                             <---------ICU4                                                             --------->YAB1                                                   <--------ATHB1                           <----------DOF2         --------->YAB1                        <-----------GT1           <---------ATHB51                                  <                    <----------DOF2               <---------YAB1                                    -                  ---------->ID1         ------>ZmHOX2a(1)  <---------ATHB12                        <                 <-----------GT1         <----------DOF2  --------->WOX13(1)          ---------->DOF2 ----DOF2    <---------MYB52(1) <---------YAB1  --------->YAB1 <---------YAB1     ---------->DOF2   -   tcattcacttactctgttttttcttttttcttttgtcattgtcctttgaacaataatagtcaatcatgttaagagatttagttagaaagaaagtagtagc  6793400  Previous    Next  AGI:  At3g19553.1    Description:  amino acid permease family protein. similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31830.2); similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63956.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) Range:  from: 6790748    to: 6792925    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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