Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ----------->GT1    --------------->AtSPL8    <---------------AtSPL8        <---------MYB52(1)      ----------->GT1                        ----    --------->ZAT6        <---------ARR11(3) <---------AHL20(2)                          ----------->GT1  <-----------GT1         --------->ARR11(3) --------->AHL20(2)                        <-----------RAV1(2) ------->GT1 ---------->DOF2 --------->GLK1(2)<---------AHL20(2)                 <---------TOE2(3)---   tgttaaacagtacaaaaaagaattgcaagataatctgtttttttttttttaatagagaaattgcaaaatgtacaaatcgaatttaggctacaggttaaaa  6780200                                       <----------DOF2                               --------->At4g35610                               <---------At4g35610        <-----------GT1     <---------At5g28300                                                   <--   <------MYB46(1)         --------->MYB52(1)                                                  <-----   <------MYB83            <-----------GT1<-----------GT1   <---------At5g28300 <---------ALFIN1 <---   ----------->GT1    ------>ZmHOX2a(1)<---------DAG2<---------AHL20(2)    --------->ANAC46   <------  --------->MYB59    <---------MYB59<---------ALFIN1<---------AHL20(2)   --------->MYB52(1)   <------ ------>DOF2    ------>ZmHOX2a(1) ------>NtERF2 <----------DOF2       --------->TOE2(3) ------>ZmHOX2a(1) ------>DAG2  <---------ZAT18--------->MYB46(3) <---------DAG2 --------->At5g28300      <----------DOF2   aaagtaggttaaacagtcctcttcctaattaaccgctgccacttttactacttttttattttcactgtgaaaacttaacgacacactgtcctttttttta  6780300                                                          ------>NtERF2                                                    --------->MYB52(1)                                                    <---------DOF5.7(2)                                                  ------>ZmHOX2a(1)                                                 --------->TOE2(3)                                                 --------->TOE1(3)                                               ------>MYB83<------NtERF2                <---------MYB52(1)    ------>ZmHOX2a(1)                        --------->AtMYB61    ----------->RAV1(1)  <-------GAMYB    --------->LBD16                          <---------ALFIN1  --------->ANAC46        ==============  ----------->RAV1(2)                       --------->MYB46(3) --------->ANAC58       ----------->GT1 -------ICU4                          ===================HOX2a_HOX2a            <---------------AtSPL8 ------GT1                   --------->AHL20(2)------>MYB46(1) --------->ANAC58 <---------------AtSPL3 ------YAB1           ----------->GT1 ------>ZmHOX2a(2) --------->RAP2.3(1)    <---------ANAC46    <- ---AHL20(2)         ----------->GT1--------->ARR11(3) ------->GAMYB         ------>MYB83          -- ---YAB1    --------->MYB52(1)      <---------ARR11(3)--------->ANAC46       ------>MYB46(1)     ----   ttattcctgagacttaacgaaaactgttaaaaaaaatagatcgtccaccatccttaacggcgcaaaccccacaaaaacctagcgagtaccgttaaactcc  6780400                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 <---                         <-----------HVH21                                                       ----                       ------->MYC2                                                              ----                       ------->MYC3                                                              ----                       <-------MYC3                                                              <---                       <-------MYC2                                                              ----                       ------->MYC4                                                              <---                       <-------PIF5                                                           <------                       ------->PIF5                                                          <-------                       <-------MYC4                                                          <-------                      --------->ANAC46                              ----------->GT1      ------->MYC2                      <---------TGA1a                               <---------ANAC58     <-------MYC3                      ================================MYC_MYB       <---------ANAC58     ------->MYC3                      <---------O2                                  <------NtERF2        <-------PIF5                      --------->O2                                  <---------ANAC46     <-------MYC2                      --------->ANAC55(2)                          ------>NtERF2         ------->PIF5   --------->ANAC46   --------->TGA1a          <------MYB46(1)    <---------ANAC46      --------->TGA1a   --------->ANAC58 <------------OsbHLH66      <------MYB83    <---------DEAR3(1)       <---------ANAC58   --------->ANAC58 <---------ALFIN1         <--------P --------->ARR11(3)              <---------TGA1a ===============================MYC_MYB    <---------ZAT2      --------->DEAR3(1)       --------->ALFIN1 --------ALFIN1   ------>MYB83           <-----------RAV1(2)  <---------LBD16           ============= ------->ZAT6     ------>MYB46(1)  <---------ANAC58     <---------ARR11(3)              <---------ANAC58 ------->RAV1(1)--------->AtMYB61  <---------ANAC58     --------->AHL20(1)   <-----------HVH21<------   aacactcgccatctcagaccatccacgtgtccctcatgcgtagccaggttggaaagaatatatcaccggcgcgtgaaattgtcagaacgcgcgtggcttt  6780500   XXXXXXXXXXXXXXXXXXXX>MIR779.2 ---->ZmHOX2a(1) -------------AGL15 ------------>AGL15 ------>TOE2(3) --------------AGL3 --------------AGL2 ------------->AGL3 ------------->AG ------------->AGL2 --------------AGL1                                                         <----------DOF2 ------------->AGL1                                           <---------ZAT14 --------------AG                                             <------ZmHOX2a(2) ----DOF2                                                     ===================HOX2a_HOX2a --ANAC58                                                     ================================HOX2a_HOX2a --ANAC58                    --------->At5g28300             --------->ARR11(3)        ------>ZmHOX2a(1) ====bZIP_DOF               ----------->GT1          ----------->RAV1(2)  ------>ZmHOX2a(1) ---GLK1(1)               <---------ANAC46  <-----------GT1  <---------ARR11(3)   <----------DOF2 ---   cctcaattggaaatttcacagacaagtagagggtaaaatagtcatttaacatcacccctgagagatcactgtcttcctctttcgctttcctcttcttaaa  6780600          ---------->DOF2   ----------->GT1                           <---------HSFB2a(2)<---------ARR11(1)  ----------->GT1        *TSS      ------>ZmHOX2a(1)           <---------CCA1(2) ------->DOF2         ----------->ARR10      --------->HSFB2a(2)--------->ARR11(3)   aaaagagttaaataaagagaagagaagagactctctcctcttcacttcgcgaactcagaaaaatcaaatctttctctctctctctctcgttgaaaaccca  6780700                                                                                           <---------At4g35610                   <---------ANAC55(2)                                                     --------->At4g35610                   --------->ANAC55(2)   ----------->GT1                                   --------->ZAT14                  <-------TEIL           --------->ANAC58           ----------->GT1    <-----------GT1           <---------REM1(1)             --------->ANAC58         ----------->GT1 <----------DOF2   tttctgtattgtgttgaagctacgttactactaagaagaagtgaagcaaaaacagaggtttttgaaaatggagaaaaaacaaggctttttctctgctctc  6780800                                                                                                  <--                                                                                                  ---                                                                                              <------                                 <------ZmHOX2a(2)                                            =======                                --------->ARR14(2)                                            =======                                <---------ARR14(2)                                     --------->At4g35610                           <------NtERF2                           <------MYB46(1)     <---------ZAT2                          <---------RAP2.6(3)                   <---------MYB52(1)     --------->ZAT2                          <-----------TGA1               --------->MYB52(2)            <---------At4g35610                          ------>NtERF2                <---------MYB52(1)          <-----------HVH21                          <-----------HVH21           ======================================MYC_MYB                         --------->ANAC46             ===============================================                         --------->RAP2.6(2)          <-------GAMYB<------MYB83   --------->O2-------                         --------->RAP2.3(3)         <---------ANAC58             --------->TGA1a<---                <---------ARR11(3)                   <---------ANAC58      <---------ZAT18    -------                --------->ARR11(3)          --------->ARR11(3)--------->ANAC58    --------->bZIP60(2)  --------->ANAC58       <---------ATERF1(2)<---------ARR11(3)--------->ANAC58    ===================  --------->ANAC46       --------->DEAR3(1)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ===================  --------->ANAC58 <----------DOF2  --------->LBD16  <---------ANAC46      --------->ZAT14    <------   agacacgaagttgtgagaggtctttcgccgtcacgatccagagcaaggtctcgttccgttagtcccgctaggtctagttcacccatgtcagctctcactt  6780900                                       <---------LBD16                                     <---------DEAR3(1)                                    --------->ATERF1(1)                                   <---------MYB46(3)                                  <---------AtMYB61                                  --------->ALFIN1                                  <---------DEAR3(1)                                <---------MYB46(3)                               <---------DEAR3(1)                               --------->ALFIN1                                        <---------MYB52(1)                             <---------MYB46(3)                                       --------->LBD16                             --------->MYB55(2)                                      <---------HSFB2a(2)                            <---------DEAR3(1)                                       --------->HSFB2a(2)                            <---------AtMYB61                                       ------>ZmHOX2a(2)                            --------->ALFIN1                                       --------->ARR14(1)                           <-------GAMYB<---------ANAC46                           <------ZmHOX2a(2)                           <------NtERF2<---------DEAR3(1)                         --------->CCA1(2)                         --------->ALFIN1                                         <---------ARR11(3)    ---------->DOF2      <---------DEAR3(1)                                       --------->ARR14(2) -------HSFB2a(2)        <---------DREB2C(2)      <---------------AGL15           --------->ARR11(3) ------>HSFB2a(2)       --------->ATERF1(1)       --------------->AGL15           <---------ARR14(3) ---O2  --------->ARR11(3) <---------ABI4(1)<---------MYB46(3)                    --------->ARR11(1) ==============bZIP_DOF <------NtERF2--------->ALFIN1                             --------->ARR14(3) ==================================MYC_MYB <---------TOE2(2)                     <---------GLK1(1) ===MYC_MYB           --------->ALFIN1 <------NtERF2                    <---------AHL20(2) -->TGA1a             <---------DEAR3(1)<---------ANAC58             ----------->GT1<---------LBD16 ------LBD16         --------->ATERF1(1)<---------ANAC58           --------->ZAT14<---------ARR14(2) -->O2  <---------ARR11(3)<---------DEAR4(2)----------->GT1  -------->P<---------MYB52(1) ===bZIP_bZIP        <------ZmHOX2a(1) --------->ATERF1(1)<---------ZAT18        --------->GLK1(1)<-- ==============bZIP_DOF <---------ABI4(1) <------NtERF2  --------->ANAC46       ----------->ARR10 --- ---TGA1a    --------->MYB52(1)<---------AtMYB61 <---------YAB1    <---------ZAT14--------->AGP1  ---   ggggaagaaagaacttaactggaggaggcggtggtggtggtggcggaggttactatttagcgcaaccagagcagttaattgggagatccggaagtttgag  6781000                        <---------REM1(1)                   ====================HOX2a_HOX2a                   =================HOX2a_HOX2a                   ------>ZmHOX2a(2)                   =======================HOX2a_HOX2a               ------>ZmHOX2a(1)    --------->ALFIN1           --------->ARR11(3)       <---------AtMYB61          <------MYB46(1)          <------ZmHOX2a(1)                                               <-          <---------HSFC1(2)     --------->ALFIN1                                                  <-          <------MYB83--------->At4g35610                                                          --          --------->HSFC1(2)    <------ZmHOX2a(1)                                --------->ZAT18   --          --------->HSFB2a(1) --------->ALFIN1        --------->GLK1(2)         <-----------HVH21  <-          <---------HSFB2a(1)<------ZmHOX2a(1)        <-----------ARR10        xxxxxxxxxxxxxxxx>smallRNA(s) ---------------AGL1  <---------At4g35610         <------ZmHOX2a(1)           --------->MYB59    ==== -------------->AGL2<-----------RAV1(2) ----------->GT1                <---------ANAC46          <--- -------------->AGL1<---------HSFB2a(2)--------->ALFIN1              <-----------HVH21     ----------   acctgtaatggaaggtcctgatccagatgaaggaggaggaggtggtaatataggagaatctaaacgactcgggtcgggtttaggtcactgggttaaaggg  6781100  Previous    Next  AGI:  At3g19540.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68554.1); contains InterPro domain Protein of unknown function DUF620 (InterPro:IPR006873) Range:  from: 6780625    to: 6783172    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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