Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->ARR11(3)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           <---------ARR11(3)       <                                                                          <---------GLK1(1)        <-                                                                          --------->GLK1(1)        <-                                                                         --------->ARR11(3)        --                                                                         <---------ARR11(3)       <--          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                      --------->MYB52(1)            ---   --------->MYB52(2)                                               ---------->DOF2               <-- -----MYB46(1)                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <--- --------->GT1              ----------->GT1          --------->AHL20(2) <------ZmHOX2a(1)      <----- -----MYB83                ----------->GT1     --------->MYB59    --------->TOE2(3)       <---------MYB52(1) ------>MYB59          <---------ARR14(2)      <---------TOE2(3)------->TEIL            <---------TOE1(3)   ttggttatttgtgtaaatttttgggtaactgggtaaaattttgggtatttaggtataaaatactcgaacctaaaggatatctgattttttcaggtattta  6772300         --------->GLK1(2) ---------GLK1(2)                                                                       --------->TOE2(3) -------ATHB1                                                   --------->AHL20(1)     ------>ZmHOX2a(2) --------ICU4                                                   --------->AHL20(2)    <------ZmHOX2a(2) ------>HAHB4                                              --------->MYB46(3)  --------->ATHB12    <- -------ATHB12                  --------->ANAC58         ------>MYB83        <----------DOF2  <------ ------>ICU4               ------>ZmHOX2a(2)             ------>MYB46(1)     <---------DAG2   <------ -------YAB1   --------->ARR14(2)              ----------->GT1  <---------ARR11(3)   --------->ARR14(2) ------TOE2(3) <---------ARR11(3)            ---------->DOF2    <---------AHL20(1)   <---------ARR14(2) ----AHL20(2) <---------CCA1(2) --------->ANAC58       <---------MYB59    <-----------GT1------>ZmHOX2a(1)   atgattctgaaattctatatctgaactgatccaaacccaattgaatccaaagtaaaaccgaaccaatattttagatttactttattggatcctaaacttt  6772400                                    --------->ARR14(2)                             <-----------GT1                             <---------ATHB12                      ------>ZmHOX2a(2)                              <-------TEIL    --------->LBD16  <------ZmHOX2a(2)                       <------ZmHOX2a(1)   --------->ANAC46 --------->ARR14(2)                     <---------TOE1(2)               <---------MYB52(2)   --------->LBD16  <---------ARR14(2) <---------ETT(1)   ------>ZmHOX2a(1)     --------->At4g35610 ----------GT1 --------->ARR14(2)   <---------ARR14(2)    --------->HSFB2a(2)   <---------At4g35610 ----DOF2      <---------ARR14(2)   --------->GLK1(2)     <---------HSFB2a(2) <-----------RAV1(2) ---DAG2      <---------CCA1(2)  --------->ANAC46        --------->TOE1(2)  ------->TEIL  <---------At4g35610   tttacccgaaaaacttatatccgatcgggttttacccgaatccgacccgaatgcccagtcctaggactacgttcaatgaatcagctgtttacagcaaacg  6772500                                                                                        ------>NtERF2                                                                                       --------->LBD16                                                                                       ------>NtERF2                                                                                      --------->LBD16                                                                                     <---------LBD16                 <----------DOF2                                        --------->TOE1(2)       --------->MYB52(1)             <---------ARR11(3)    --------->At4g35610   --------->ARR14(2)-      <---------ZAT14                 --------->ARR11(3)    <---------At4g35610   <---------ARR14(2)-     ----------->HVH21                --------->GLK1(2)  ---------->DOF2--------->TOE2(2)   <--------   cttcgaagtgaacgggaaactttccctccttgaacttaaaaatctagatagttctatagcaaagctgaagcatacctgtgaacaaatcccggcccttggg  6772600                                                                                        <---------YAB1                                                                                       <---------AHL20(1)                                                                                       --------->AHL20(2)                                                             --------->AHL20(2)        --------->AHL20(1)                                                             <---------AHL20(2)      ------->TEIL                                                            <---------ATHB12    <-------GAMYB--------                                                            --------->AHL20(2)  --------->At4g35610           --------->ARR11(3)                           ------------>CBF       <---------MYB46(3)     --------->LBD16               <-------GAMYB      --------->ANAC58       <---------MYB52(1)    ----------->GT1    --------->CCA1(2)              --------->ANAC58      <-----------HVH21<------- -------->ANAC58      --------->ARR14(2)           ------->GAMYB           <---------ANAC46  <------- -------->ANAC58      <---------ARR14(2)        ----------->RAV1(1)        <---------ANAC58  *TSS -MYB52(1) <---------ARR11(3) --------->CCA1(2) --------->MYB52(1)         <---------ANAC58  <-------   ccaagcccgtgaatatctatatcagatatgagatttgggttgagaaggcccaacagaagccaataaatgaattcattccgtcggatgaatataatacgta  6772700                                             --------->DEAR3(1)                                           ------>NtERF2                                          --------->DEAR3(1)                                          --------->ATERF1(2)                                          --------->RAP2.6(2)                                          --------->RAP2.3(2)                                          <---------ATERF1(2)                                         --------->ATERF1(1)                                         --------->ERF1                                        --------->At4g35610                                        <---------ATERF1(1)                    --------->TGA1a                                     <---------At4g35610                       <---------ANAC55(2)                                     --------->At4g35610                       <---------bZIP60(1)                                    --------->MYB52(2)                         <---------bZIP60(2)                                <---------MYB46(3)                             --------->O2                                <---------HSFC1(2)                             <---------ANAC58                                <---------DEAR3(2)                             <---------ANAC58                                --------->HSFC1(2)            --------->TOE1(3)<---------TGA1a                                --------->HSFB2a(1)           --------->TOE2(3)--------->bZIP60(1)                            --------->ETT(2)<------NtERF2     <---------------AGL15                            <---------DEAR3(1)   --------->HSFC1(2)            <---------O2                            <---------ETT(2)<XXXXXXXXXXXXXXXXXXXXMIR779.2      --------->TGA2(1)                            --------->DEAR3(1)   <---------HSFB2a(1)           <---------TGA2(1)                            <---------WRKY12--------->RAP2.3(1)<---------------AGL15      --------->At5g28300                            ----------->HVH21--------->RAP2.6(2)              ----------->STF1                         <---------ANAC46--------->RAP2.3(1)  --------------->AGL15  <-----------RAV1(1)           --------->ARR11(3)  <---------DEAR3(1)--------->HSFB2a(1)   ==============================        --------->AHL20(2)<-----------HVH21--------->LBD16  =============================MYC_MYB   ==  ----------->RAV1(2) --------->TOE1(2) <---------At4g35610 -------->P <------ZmHOX2a(1)<---------At1g77200 ->ANAC55(2)        --------->ARR14(2)  ------>NtERF2       ------->TEIL ---------->TaMYB80        -- --ANAC55(1)        <---------ARR14(2) --------->DEAR3(1)=====================HOX2a_HOX2a<---------DEAR3(2) --ANAC55(2)   <-----------HVH21<---------HSFB2a(1)      <------ZmHOX2a(2)   <---------TGA2(2)  ----- --ANAC46  <---------ARR11(3)------------>AtMYB77<---------HSFC1(2)  <---------TOE2(3)  --------->ETT(1)   taacgcctgaataaatctttcagacctgcgtcgacggttcgctgccgccgaaatttccgatcaaccttaataaggaatatgacgtctctgtcggtaaatg  6772800                                     <------NtERF2                                    <-----------HVH21                                   <---------ANAC58                                      <---------ANAC58                                   <---------ANAC58                                      <---------ANAC46                                   --------->bZIP60(1)    <-------TEIL                   <---------ANAC58      --------->ARR11(3)           <---------bZIP60(1)    --------------->AtSPL8--------->ARR11(3)     <------ZmHOX2a(1)             <---------ANAC46       ------->TEIL          <---------ARR11(3) =====HOX2a_HOX2a     <---------At4g35610        --------->ARR14(2)           <---------YAB1 ===========HOX2a_HOX2a   <-----------------------TaNAC69(2)              --------->AHL20(2) ---->ZmHOX2a(2)      --------->At4g35610        <---------ARR14(2)       <---------AHL20(2) ---->ATHB12        <-----------RAV1(2)          --------->GLK1(2) <----------DOF2------>ZmHOX2a(2)   atcggaaggattttgtagatgggcagatgaagtactggcgtcaaatagccgaatccgatgtacgttcttctttcatttttatgatctaatttcgtctagt  6772900                                             <---------ANAC58                             --------->At4g35610                             <---------At4g35610                       --------->MYB52(1)    <---------ANAC58                               <--------                      --------->AHL20(2)     <---------ANAC46                               ---------                      <---------AHL20(2)  <---------WOX13(1)                         <---------ARR14(2)                   <--------HAHB4        <---------ANAC58                            --------->ARR14(2)                   --------->YAB1        <---------ANAC58                           <------ZmHOX2a(1)                  <---------ATHB12      --------->ATHB12                --------->HSFB2a(2) ---------                  <---------YAB1      <---------WOX13(1)                <---------HSFB2a(2) <--------   ttttttttggtagcaaacctataattaactgagatgagagattgattgcttagggtttcgatatcgatgatgttccagtaccaagaggaaccagagctgg  6773000                                                                      <------MYB46(1)                                                                      <------MYB83                                                                     <---------MYB46(3)                                                                     <---------AtMYB61                                                                    <--------P                        <---------TOE2(2)                         --------->ATHB12                        <---------TOE1(2)                         <---------MYB46(3)                       <---------ALFIN1                          <---------YAB1                      --------->DEAR3(1)               <---------ARR11(3)        <---------MYB52(1) -ZAT2   <---------ETT(2) <-------MYC3                 --------->ARR11(3)    <---------At5g28300 >At4g35610          --------->ANAC58            --------->ANAC46<---------TOE1(3) >ZAT2   --------->ETT(2) ------->MYC3   <---------ANAC58        <---------AtMYB61                 -- -At4g35610          --------->ANAC58    <---------ANAC58        <---------TOE2(3)           <-------   actgtggtctgtcgactgtaaacacccacgttttaggcttagggcttgtttacccaagatttatgctatggttggtcttcaccgttacaatttgctcagg  6773100                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                         <---------ANAC58                                      ------             --------->ZAT18             <---------ANAC58                                      ------         <---------ICU4                --------->ARR11(3)              <---------ANAC46      --------   --------->TOE1(3)               <---------AHL20(2)                  <---------ANAC58     ---------   --------->TOE2(3)           ----------->GT1                         <---------ANAC58     --------- -------->DOF2               <---------ANAC58            <---------ATHB12                  <---------ATHB12 ----RAV1(2) <---------ZAT18 <---------ANAC58         <---------AHL20(2)            <---------MYB46(3)   gtaaagcttaattagtcccctcttgctacttacttgttaaatttcttgctacttgtttaatcagtctcatcttgcttgctacttagttgttcaataatat  6773200  Previous    Next  AGI:  At3g19520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28500.1); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462) Range:  from: 6772693    to: 6774451    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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