Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------CCA1(2)                                                                                 ------->TEIL                                                                              --------->ANAC55(1)                               --------->AHL20(2)                             --------->ANAC55(2)                            ----------->GT1                                   --------->ANAC58         <---------ANAC58  ----------->GT1                         --------->ANAC58      <------ZmHOX2a(2)         <---------ANAC58 <---------TOE2(3)          <---------AHL20(2)       <---------ANAC55(2)     <-----------RAV1(2)---------->DOF2          ------>ZmHOX2a(1) --------->ANAC58    --------->At4g35610 ---------ZAT18       --------->At4g35610   <---------GLK1(2) ---------->DOF2 --------->ANAC58-------   gatgcactcaggcgtttctaaatcagcaaaggtttaaatacttgtagattcctatataatcaaacaaagaagcaaaacacacgtatatcagatcagaatc  6766200                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                    <---------ICU4                         <---------ANAC55(1)                                                    <---------AHL20(2)                     <---------ANAC58                                                   --------->ICU4                          --------->ANAC55(2)                                              <------MYB46(1)                              <---------ANAC55(2)                                              <------MYB83                      ------>ZmHOX2a(1)----                                              ----------->GT1                   =====================                                          --------->ZAT2                        =====================                                          <---------ZAT2             <---------ANAC46     <<<<<<<<<NAP    --------->At4g35610     ---------->DOF2<---------ANAC58       <---------ANAC58--------->ANAC58 -->GLK1(2)             ----------->RAV1(1)<---------ANAC58       <---------ANAC58--------->ANAC58   aatatgagcaaacacaagagaaaaacccacaaaagaaaaatgggagcttggtaaatatttctgcgattgcttcgtctagttcctaagctacttacgtgct  6766300       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     <---------ARR11(3)     --------->AGP1     --------->ARR11(3)    <---------GLK1(1)    --------->GLK1(1) -----WOX13(1) ------DOF2                                                                                      ---- ----ANAC58                            <------ZmHOX2a(2)                                         ---- ----ANAC58                           --------->AGP1                       ----------->GT1       ---- ------->HVH21                        <-----------ARR10          --------->ZAT18   --------->ANAC46 =============HOX2a_HOX2a             <---------ARR14(2)         --------->At4g35610      --------->DAG2 ============HOX2a_HOX2a              --------->ARR14(2)  <---------------------WRI1     ---------->DOF2   tgacagagatcttaaacaagaacatcagacaaaaaacacagatcgacccttgatatggttttcgatgagcacaagagaagaaaaaacgcgataaagtaat  6766400                                                                            --------->ANAC58                                 --------->At4g35610                        -------->P                                 <---------At4g35610                        --------->ANAC58 ----->TOE1(3)                   <---------ZAT2                           --------->MYB46(3)      <-- ----->YAB1       --------->CCA1(2)        <---------AHL20(2)     --------->CCA1(2)               <-- ----->TOE2(3) ----------->ARR10 --------->ZAT2              --------->ANAC46 ------->GAMYB    <-----   cttagctataacgaggttagatttgggtattgctaagctgagtattgaattttctaaatttctacgagataagaaaacaacccagacactaaatgttaag  6766500                                                                                                 >>>>                                                                                              *TSS                                                                                        <-------GAMYB                                                                                        <---------At4g35610                                                                                       --------->MYB52(2)                                                                                   <---------ANAC58                                                                                   <------MYB46(1)                                                          --------->LBD16          <------MYB83------                                                        <---------LBD16            <---------ANAC58                                              <------NtERF2                       <---------DEAR3(1)                 --------->LBD16             --------->ANAC58                     <---------MYB46(3)                 ------>NtERF2              --------->DEAR3(1)                    --------->MYB111(2)                --------->ANAC46<---------DAG2--------->LBD16                     --------->MYB55(2)       ------>ZmHOX2a(2)    <-----------GT1 <---------LBD16                      <---------MYB55(1) --------DOF2  --------->MYB46(3)   <-----------GT1  <-----------HVH21           --------->ALFIN1---- -------DAG2 --------->ARR14(2) <----------DOF2--------->ANAC46                 <---------MYB52(1)  > ----TOE1(3) <---------ARR14(2)<---------DAG2--------->ANAC58          ----------->ARR10--------->At4g35610   ctttttcgatctctctatccgccaaaaattttacctttttccctcgcccgcgaaatgtcccgcgagaattgagaagaaactcggtgggtgagttgagaag  6766600       ---------->DOF2                              ----------->GT1 ----------->GT1                                 --------->MYB52(1)                          <------- >>>>>TBF1               <---------AtLEC2   --------->MYB52(1)<---------ANAC46              --------- ------------------>ANAC81           <---------At4g35610 --------->MYB52(1)            <---------AHL20(2) -------------------->ANAC81         --------->At4g35610<---------ARR14(2)             <---------AHL20(1) >>>>>>>>TBF1          --------->AtLEC2    ---------->DOF2    ----------->GT1          --------->AHL20(1)   aagaagaaaaaaagaagagagagccttgcaaggtcgctcagaagacaaagggaacggagaaacggcgtaatttgggcttcattatgcattatattcttaa  6766700                                                                       ----------->HVH21                                                                      <-----------HVH21                                                                      --------->LBD16                                                                     --------->TGA1a                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     --------->ANAC55(2)                                                                     <---------ANAC55(2)                                                                     <---------TGA1a                                                                     <---------O2                                                                     ================================                                                                     --------->O2                 ---                                                                     <---------ANAC58         -------                                 <---------ANAC46                <---------SPL7             ---------                                 <---------ANAC58               <---------ANAC58       --------->TOE2(3)                                 <---------ANAC58               <---------ANAC58   <------ZmHOX2a(1)                               <---------ARR11(3)          ====================bZIP_DOF--------->TOE1(3) --YAB1               <---------AtLEC2                     <----------DOF2<---------bZIP60(2) ------- >TOE2(3)    ------>NtERF2     --------->ARR11(3) <------------------------ANAC81<---------TOE2(3)===   tgggtctacttatgaggcccatttgcatatcaatgtcttggtattgttgttttgtttctctctttttcgtcccgtgacatgttaaggagccttaaaaagc  6766800                                                                                             --------                                                                                           <---------ALFIN1                                                                                       --------->ZAT14                                                                                       <---------ZAT14 ==bZIP_DOF                                                   ---------->DOF2          <---------ZAT18 -------->RAV1(1)                                      --------->ANAC46                --------->ZAT18 -->ANAC58                                      --------------->AGL15                ------->MYC3 ->DOF2     ----------->RAV1(2)                 <---------------AGL15                <-------MYC2 -->ANAC58 ------->TEIL                        <-----------------AGL1                ------->MYC2 =======================RAV---------->DOF2   <-----------GT1--------->AtLEC2         <-------MYC3   caacaaaaacttgtacctggctaatagacaaaagaaatactcttgttttactaaaataggccatgaaagtgattccctcaaatcccatgtgcacaacctg  6766900                                                                             ----------->GT1                  --------------->AtSPL8<----------DOF2                    --------->DAG2       --------->SPL7         <---------ICU4                      <---------ANAC58      <---------SPL1(1)    --------->ANAC46                       <---------ANAC46     <---------SPL7        --------->bZIP60(2)                    <---------ANAC58     <---------ZAT14     --------->ANAC46                       <-----------HVH21     --------->ZAT14  ------->TEIL <---------LBD16             <-----------RAV1(1)               ----   <---------------AtSPL3<---------ALFIN1 --------->ATHB12   ------>ZmHOX2a(1)                 ------ --->RAV1(2)     <----------DOF2  --------->MYB52(1)   <---------MYB52(1) ---------->DOF2 --------->YAB1   atgactctgtacgggccttctttgtacccacatcattaccggcttcatttgcaggccgttttcctctgtcgtagcaaaaaggaaacatacaaccatgaat  6767000                                                                                        <---------ANAC58                                                --------->At4g35610                  <----------DOF2                                                --------->ZAT2                 <---------ZAT18 --------->ANAC58                       ------>ZmHOX2a(2)                   <---------ANAC58      <-- --------->ANAC46                      <------ZmHOX2a(2)                    <---------ANAC46   <----- --------->ANAC58                     --------->ARR14(2)                    <---------ANAC58   ------ ----->YAB1                           <---------ARR14(2)                   <-------TEIL <---------ANAC58 ->TEIL       --------->YAB1     <----------DOF2<---------At4g35610      <---------GLK1(2)    <------ZmHOX2a(1)   cacaagtcacaaacattcaaaagactcacattcaactttggatccaaatcagcttacctttcaacaatttctacaggttcgtgcattctttcttgaggac  6767100  Previous    Next  AGI:  At3g19510.1    Description:  homeobox protein (HAT 3.1). Identical to Homeobox protein HAT3.1 (HAT3.1) [Arabidopsis Thaliana] (GB:Q04996;GB:Q8GZA9;GB:Q9LT66); similar to PRHA (PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A), transcription factor [Arabidopsis thaliana] (TAIR:AT4G29940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68079.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Zinc finger, FYVE/PHD- Range:  from: 6762770    to: 6766594    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g19515.2    Description:  binding. similar to apoptosis inhibitory protein 5 (API5)-related [Arabidopsis thaliana] (TAIR:AT1G23935.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66362.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Apoptosis inhibitory 5 (InterPro:IPR008383) Range:  from: 6766674    to: 6771175    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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