Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                         <<<<<<<<<TBF1        --------->YAB1                       --                                --------->ARR14(2)            --------->AHL20(2)          ------>ZmHOX2a(1)                               <---------MYB52(1)       --------->ANAC58                 --------->TOE1(3)                              --------->LBD16           --------->ANAC46               --------->ICU4                            <---------LBD16             --------->ANAC58    <---------AHL20(2)     --                          --------->ARR14(2)     --------->ANAC58           --------->AHL20(2) <-----                          <---------ARR14(2)     --------->ANAC46         --------->TOE2(3) <--------     ------>ZmHOX2a(2)<-----------------AGL1     --------->ANAC58         <----------DOF2--------->TOE2(3)   attttgatccgactcttgcccattacccgttccggttctcttcttcttcacaagacacacacaataaaaaacacatctttaaatttgtaatccttaatta  6760500                                                                             <---------ANAC46                                                                            <------NtERF2                                                                           <-----------HVH21                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46           --                                                                     <---------ARR14(2)            --              ---------->DOF2                 --------->ATHB12       --------->ARR14(2)         ----- ------->ANAC46                              <---------YAB1          --------->ZAT14          <------ ------->ANAC58                           <---------MYB46(3)         <---------REM1(2)       -------- ------->AtLEC2                      <---------At5g28300             --------->SPL7          -------- ------->ANAC58    --------->GLK1(2)--------->MYB52(1)             <---------SPL7           --------- ----AHL20(2)--------->AHL20(2)    <---------SPL7              ------------------>SPL14  ------>ZmHOX2a(1) -ICU4 --------->AtLEC2  --------->YAB1 <-------GAMYB         --------->ETT(2)      <---------GLK1(1)   catgcaactatgcaaataaagaatcagtaatgagagacttacggttgatgatttagtagatttatcgaccgtacacgcgtcgtttgagttcctgcaatca  6760600                                     <--------P                                    <-------GAMYB    --------->HSFB2a(2)        ----------->HVH21          <---------MYB46(3)--------->HSFC1(1)      <---------AtLEC2             --------->MYB55(2)<---------HSFC1(1) ------->TOE2(3)              <---------LBD16   <---------HSFC1(2) ------->YAB1               --------->GLK1(2)   --------->HSFB2a(1) ---->WOX13(1)       <------ZmHOX2a(2)          <---------HSFB2a(1) ---ATHB12          --------->ARR11(3) <------MYB46(1)  <------ZmHOX2a(1) ->ANAC58           <---------ARR11(3) <------MYB83  <---------HSFB2a(2)      <---------YAB1 ->ANAC58         --------->ICU4--------->LBD16 --------->HSFC1(2)      <------NtERF2 >WOX13(1)     --------->WRKY18(1)<---------AtMYB61  >>>>>>>ZML2      <---------DEAR3(1)   atcttaatgcatgaagggtcaagatcagagactccggaggttggaacagaaggttctaggaagagtgactcgtcgtcgttttgatagcctccactaaaac  6760700                                                                             <---------DEAR3(1)                                                                             <---------MYB46(3)                                                                             --------->MYB46(2)                                                             =======================RAV                                                             ----------->RAV1(1)                                                             ------>NtERF2   --------->MYB111(1)                                                             <---------RAP2.6(3)    --------->ETT(1)                                                             <---------DDF1  --------->ALFIN1                                                            --------->At1g77200  --------->MYB55(2)                                                            --------->DEAR4(1)<------MYB83    <------                                                            --------->RAP2.3(3)  <---------MYB46(3)                                                            --------->DREB2C(2) <---------AtMYB61                                                            <---------ETT(1) --------->MYB55(2)                                                            --------->DEAR3(1)<---------MYB46(3)                       <------NtERF2--------->TOE1(3)      --------->RAP2.3(1)<------MYB46(1) -------                      --------->LBD16                    --------->DEAR3(1)  <---------AtMYB61<------                     <---------ANAC46                 <---------ALFIN1       --------->MYB111(2)                     --------->ETT(1)                 --------->AtMYB61     <---------MYB55(1)-------                    <---------LBD16 <---------MYB59--------->ANAC46         <--------P    --------->ALFIN1               --------->ARR14(2)   --------->TOE2(3)--------->MYB46(3) <-----------RAV1(2) <------ZmHOX2a(1)   agagcattcttgagccagttttgccggagaatacaaaacctaaactgtcttctccaccatcgccgacattaccctcaggttggtggtcggaagaggagct  6760800       <------NtERF2      <---------RAP2.6(3)      ------>NtERF2                                                               <---------LBD16      <-----------HVH21                                      --------->ZAT2       --------->ZAT14     --------->DEAR3(1)                                      <---------ZAT2    ----------->RAV1(2)     --------->RAP2.3(3)                                 --------->YAB1        ------>ZmHOX2a(1)    --------->RAP2.3(1)                                  <---------ICU4      ------>ZmHOX2a(2)  --------->ANAC58                               --------->ZAT2              XXXXXXXXXXXXXXXXXXXXX>MIR771  --------->ANAC58                               <---------At4g35610       <---------ARR14(2) ---At4g35610                                    <---------ZAT2            --------->ARR14(2) -->ZAT2                                     ------>ZmHOX2a(1)       <---------SPL7    --------->ARR14(2) ---ZAT2                        --------->GLK1(2)--------->At4g35610<---------ETT(2)   <---------ARR14(2) -->At4g35610   --------->TOE1(2)     <---------MYB52(1)<---------YAB1   ------>ZmHOX2a(1)   gagaacgccgtcagagaacataagaagttcggagaagctcgttactccttcagcttccatcatagctcggtcgtcctgatcctctgcggtatctcccatc  6760900                                                                 <---------AHL20(2)           <------           ---------->DOF2                                     <---------RVE1(1)             <-------       <---------LBD16                                        --------->ARR11(3)             --------      <---------ANAC46                                        --------->ARR14(2)             <-------      <---------ANAC58                                        <---------ARR14(2)          <----------      <---------ANAC58                       *TSS --------->TOE1(3)                  <-----------GT1  <----------DOF2     ---------->DOF2 --------->DAG2          <---------ARR11(3)    ---------->ID1  ===================================================================================================  <---------DAG2----------->GT1      ---------->DOF2         <------ZmHOX2a(1)     <-----------GT1  <---------------AGL15        ---------->DOF2    --------->TOE2(3)    ----------->GT1  <----------DOF2   gtgacttttcgtggaaagaggttagaaagaaaacaaagagaaagtgagaaaacattaaccagaggattttttttggtgaaatgtttttctctttaccttt  6761000                                                                            <---------YAB1                                                                          --------->YAB1                                                                          <---------ICU4                                                                          --------->ATHB51                                                                          <--------HAHB4          <-----------GT1                                       --------->AHL20(2)    <----------DOF2                                             <---------AHL20(2) ----DOF2<---------YAB1                                  <-------TEIL     --------->ATHB12 --------AGL15                                      --------->AHL20(2)    -------->ATHB1 ------->AGL15----------->GT1                       <---------AHL20(2)   <---------YAB1 --DAG2--------->YAB1                           --------->AHL20(2)       --------->ICU4 -GT1<-----------TBP            <---------ANAC46<---------AHL20(2)       <---------ATHB51           < ========MADS_MADS    <-----------GT1        <---------ICU4   --------->AHL20(2)       <----------DOF2   tttagacttttataactggtttattcacaaaatggctgatgttctaatatttatttatatacatatatatatacaattattagttttctctttttttgtt  6761100                         --------->ANAC46                                                  <---------ZAT6          ----------->RAV1(2)                                                              ----------          <---------ANAC55(2)                     --------->TOE2(3)                    <--------P          --------->At4g35610                 <----------DOF2        <-----------GT1 <------MYB46(1) ----------DOF2       --------->TOE1(2) --------->ICU4           --------->TOE2(3)   <------MYB83  --   ttctttaacatcacctgtctaaattctacgaaggaaaatgtaatgtttcttttcttaaaatcaaaaacattatactatctatctatttggttagtgttaa  6761200                                                                         <---------HSFC1(2)                                                                         --------->HSFC1(2)                            <----------DOF2                          ----------->GT1          <------                      <---------ZAT6                              <---------AtLEC2            ------- <---------MYB52(1) ----------->GT1                      ----------->HVH21             --------->GLK1(2) ->GT1            --------->ARR11(3)                   --------->ANAC55(2)         <-----------GT1 --------->GT1---------->DOF2                xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->YAB1   actgttaattcaagaaaaaagatagtgatacttttgttgataatgggtattcagtttatgtgacacttgtatggatacttctgtataacaatctagtgaa  6761300                                                                                        <---------O2                                                                                        <---------At4g35610                                                                                        --------->O2                                                                                        --------->At4g35610                                                                                        <---------ZAT2                                                                                        <---------TGA1a                                                                                        ----------->RAV1(2)                                                                                        --------->ZAT2                                                                                        --------->TGA1a                                                                                       ------>NtERF2       <---------YAB1                                                              --------->ANAC58     <---------ICU4                                                                --------->ANAC58     --------->ATHB12                                                            =================bZIP_DOF    <---------YAB1                                                               ---------->DOF2    --------->ICU4             <---------TOE2(3)                                <---------WRKY38(1)  --------->YAB1   --------->YAB1                                               <---------WRKY45 --------->ICU4  <---------WOX13(1)        ---------->DOF2                      <---------WRKY12 <---------YAB1--------->ATHB12<---------TOE1(3)                              <-----------HVH21 ---ZAT14     <---------YAB1--------->DOF5.7(2)             --------->ICU4  --------->MYB59     ----- -->ZAT14  <---------ZAT6   <---------MYB52(1)      --------->YAB1  ----------->GT1--------->ANAC46   gtgatgatgattagtgttgattgataagtcgttaagggagggatagaaagggaattatagaaatgttgaagagaaaattgggtcaaagccacctggcccg  6761400  Previous    Next  AGI:  At3g19500.1    Description:  ethylene-responsive protein -related. similar to ethylene-responsive protein -related [Arabidopsis thaliana] (TAIR:AT1G49830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70851.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 6759022    to: 6760945    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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