Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ARR11(3)                                    --------->ARR11(3)             <-----------GT1    ---------->DOF2 --------->TOE1(3)            <---------YAB1                                      <-----------GT1 --------->TOE2(3)          --------->CCA1(2)                                     <---------AHL20(2) ---------HSFB2a(1)        <---------ARR14(2)                 <-------TEIL   <---------YAB1 ----HSFB2a(2)          <---------TOE2(3)                    --------->CCA1(2)--------->AHL20(2) --->HSFB2a(2)         <-----------GT1          ---------->DOF2             --------->AHL20(2)   gaacgttagacaaattttcagcatttgacgatatgaaagatgtctaaatctaaagaaacagagatacaattctttcaatattatatacttgctaactatc  6752100                                                                                                  xxx                          <---------AHL20(2)                                                      <--                     --------->AHL20(1)                                                         -----                     <---------AHL20(1)   <-----------GT1                                   <--------                  --------->AHL20(2) --------->ANAC55(2)                           <---------YAB1 <--                 --------->YAB1      <---------ANAC55(2)                          <---------AHL20(1)                --------->AHL20(2)  <-------TEIL                            <-----------GT1 ---------            --------->AHL20(2) --------->AHL20(2)                        <----------DOF2<-----------GT1        ----------->GT1   --------->AHL20(2)                 <-----------HVH21 --------->TOE2(3)-----   aagaacaggcatgaaaaaataaaaatattaaaaaaaaatacatattactatatagaattcatatgtcatcgataacttttacattattttttacaatccg  6752200                                                               <---------AHL20(2)                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                         <---------AHL20(1)                                                    <---------AHL20(2)      ---------->DOF2                ------->TEIL   --------->AHL20(2) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------CCA1(2)<---------YAB1 --------DOF2<---------DAG2   --------->AHL20(2)    <---------AHL20(1) ->NtERF2    <----------DOF2  <---------AHL20(2)   --------->YAB1 -ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------AHL20(2)                      <---------- -------DAG2<------NtERF2--------->ARR11(3)       <---------YAB1              --------->AHL20(2) >ARR14(2)--------->ANAC46--------->CCA1(2)   <---------AHL20(2)              <---------AHL20(2) ---->LBD16------>NtERF2 <---------ARR11(3)   --------->AHL20(2)         --------->AHL20(2)   ccttacttaaacgcgccttatctaatagatatataaatgtatctctatttatattataatttaatttaaaatcaatataaaaaaatgtgttttttcaatt  6752300                                                                                                   <-                                                                                                -----                                                                                            <--------                                                                                            ---------                                        <---------AHL20(2)                                  <--------                                   --------->AHL20(2)                                   <---------ICU4                                   <---------AHL20(2)                                   --------->ATHB51              ------>MYB46(1)      <---------YAB1                                       <--------HAHB4              ------>MYB83      --------->AHL20(2)                      --------->AHL20(1)  ---------            --------->TOE2(3)   --------->AHL20(1)                      <---------AHL20(2) --------->AHL20(2)            <---------MYB59     <---------AHL20(1)                      --------->AHL20(2) <---------AHL20(2)    ----------->RAV1(1)<---------AHL20(1)                    <---------AHL20(1)        --------->ICU4 <-----------GT1       <---------AHL20(2)          <---------TOE2(3)    <---------AHL20(1)<---------YAB1 -GT1 --------->ANAC46--------->YAB1  <---------YAB1      ----------->GT1              <---------YAB1   tttaaaccacataacctaatagtataatatttgatatattattattttgttttaagaatgtagtatatttgtattttattagcaaaaccattattaaatt  6752400  <----------DOF2  <---------DAG2                                                        <---------ANAC46 ----------GT1                <---------ARR14(2)                 <------ZmHOX2a(1) ------>GT1                   --------->ARR14(2)               <---------TOE2(3) -AHL20(1)         ---------->DOF2                --------->CCA1(2)     <---------ANAC58       <----- >AHL20(1)        <---------AHL20(2)             <---------ARR11(3)     --------->ANAC55(2)  <------- -AHL20(2)    <---------------AGL15              --------->ARR11(3)<---------REM1(1) ----------->RAV1(1) >AHL20(2)    --------------->AGL15--------->ANAC46      --------->ZAT18<---------ANAC58<---------ARR11(3)   gtaacttttttttcttctatataaagtttcaaaatccacttaagaagtgaagatataagtgaacaaaggatgtagcgtaatctagcacaacatatttaaa  6752500                                                                                                   <-                                                                                                   <-                                              <---------ANAC58                       --------->DEAR3(1)                                              <---------ANAC58                     --------->LBD16 --               ---------->DOF2               --------->At4g35610                   ------>NtERF2   <-             --------->ANAC46             <-------GAMYB                           --------->ANAC58 --             --------->ANAC58        --------->ZAT14                              --------->ANAC46 <-          ------>MYB46(1)            *TSS<-----------RAV1(1)                      --------->ANAC58 --          -------->P         <---------ARR14(2)                             <----------TaMYB80     --          --------->MYB52(1) --------->ARR14(2)                <----------DOF2   <---------LBD16  ---         <---------ALFIN1    <---------ARR11(1)            <---------ALFIN1<---------AHL20(2)     <--        --------->MYB46(3)   --------->ARR11(3)           <-------TEIL     <---------AHL20(1)    <---  --------->ANAC46          <---------CCA1(2)<---------At4g35610           --------->AHL20(1)    ---- ------GT1------>MYB83 ------->TEIL  <---------ZAT14  <-------TEIL        --------->AHL20(2) <------- --AHL20(2)  --------->ANAC58<---------ARR11(3)----------->TGA1======================================   cctcacaaaacccacccgaaagatgaacccatatctctctactctgttgctgacgatacatacacctttacttacattatattcccgccatcgcgatggc  6752600        ------->TEIL --------O2                                                                              ============ --------bZIP60(2)                                                                      --------->ARR14(2) ------->TGA1a                             <-----------HVH21                            <---------ARR14(2) --------TGA1a                            --------->bZIP60(2)                           ------------- ------->bZIP60(2)                ------>ZmHOX2a(1)                                 <------NtERF2 --------bZIP60(1)   ====================HOX2a_HOX2a                                --------->ATERF1(1) ------->O2          ------>ZmHOX2a(2)    --------->ANAC58                         ------>NtERF2 ------->bZIP60(1)   =================HOX2a_HOX2a                                 <---------DEAR3(1) ------>ATERF1(1)    ==============HOX2a_HOX2a                                <---------At4g35610 <-- ----NtERF2   --------->YAB1   ------>ZmHOX2a(1)<---------ALFIN1          <-----------HVH21    ------ ------ATERF1(1)   --------->ARR11(3)     --------->ANAC58------>ZmHOX2a(1)   --------->At4g35610<--- -->NtERF2   <---------YAB1 ------>ZmHOX2a(1)   --------->AtMYB61 <-----------GT1 ----------->HVH21 --DEAR3(1)--------->WOX13(1) <---------ALFIN1 --------->MYB46(3)<-----------GT1  --------->DEAR3(1) ========bZIP_DOF  <---------ARR11(3)    <-------TEIL <---------ALFIN1   --------->ANAC46<------ZmHOX2a(2)   gacgtctctgaatctatcatcgatcttctcctcctcctcaaggctcgtcaccactccctcctctgtttttcccatccgtcagaggcgacggatcatcctc  6752700                                               ------->GAMYB               --------->LBD16                <---------ANAC46              --------->HSFB2a(2)           --------->MYB52(1)         <<<<<<<<<TBF1                   --------->ANAC46 --------->ANAC55(2)           --------->TOE1(2)                                         --------->ANAC58 <---------ANAC55(2)           --------->DEAR3(1)                                   --------------->AtSPL8 <---------ANAC55(1)           --------->TOE2(2)                                    <---------------AtSPL3 <---------ANAC46   --------->ALFIN1     --------->ANAC55(2)                 --------->At4g35610 <---------ANAC58<---------DEAR3(1)  --------->GLK1(2)                     ------>ZmHOX2a(2) <---------ANAC58<---------AtMYB61  <---------GLK1(2)                    <---------ARR14(2)         < =HOX2a_HOX2a <---------ANAC46--------->MYB46(3)                         --------->ARR14(2)         < ---------->TaNAC69(2)   <------ZmHOX2a(1) ----------->HVH21           ------>ZmHOX2a(2) --------->ANAC58 -------MYB52(1) --------->ALFIN1   <---------ARR14(2)               <---------ARR14(2) <---------ZAT18 >ZmHOX2a(1) <---------LBD16  --------->DEAR3(2)    --------->GLK1(2)--------->ARR14(2) --------->ZAT18 --------HVH21<---------HSFB2a(2)   --------->ARR14(2)           --------->LBD16    <---------------AtSPL8   gttacgtcttcttcttccggaggtggaggaaaaccgacgattctcgtaacggagaagctaggccaagcggggatcgatctgcttaagaagtacgctaatg  6752800                                          <------ZmHOX2a(2)                                          ===================================HOX2a_HOX2a                                          --------->GLK1(1)                                          <---------GLK1(1)                                         --------->ARR14(3)                                         <-----------ARR10                                         <---------AGP1                                         <---------ARR14(3)              ===================HOX2a_HOX2a            <---------ZAT18               <------MYB46(1)              ------>ZmHOX2a(2)          --------->ARR11(3)                         =================             --------->At4g35610         <---------ARR11(3)              <---------ZAT6             <XXXXXXXXXXXXXXXXXXXXMIR2111A*==================================HOX2a_HOX2a            <---------ARR11(3)           <---------ARR14(2)              --------->ALFIN1            --------->ARR11(3)           --------->ARR14(2)           <------ZmHOX2a(1)          <---------YAB1      <----------DOF2   <----------DOF2    <-----------RAV1(2)<------MYB83 <---------WOX13(1)       ========================HOX2a_HOX2a    <-----------HVH21  --------->ALFIN1 ---------ANAC58          <------ZmHOX2a(1)------>ZmHOX2a(2)     <-----------TGA1   <--------P ---------ANAC58          =======================HOX2a_HOX2a ---------->CDC5     <---------TOE2(3)   tggattgctcttatgatctgagtctcgaggagctttgtacgaagatctctctttgtgatgcgctcatcgtcaggagtggtaccaaggttgggagagatgt  6752900                                                                           ------>NtERF2                                                                          --------->DEAR3(1)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                         --------->RAP2.3(1)                                                                         --------->ORA47(2)                                                                        <---------RRTF1(1)                                                                        <---------RAP2.6(1)                                                                        <---------DEAR4(2)                                                                        <---------ORA47(2)                                                                        <---------ERF1                                                                        <---------ATERF1(1)                                                                        <---------RAP2.3(1)                                                                        ------>NtERF2                                                                       --------->DEAR3(1)                                                                       <---------ATERF1(2)                                                                       <---------RAP2.3(2)                                                                       <---------RAP2.3(3)                                                                       --------->ATERF1(2)                                                                       <---------DEAR3(1)                                                                       <---------ANAC46                                                                      --------->DEAR4(2)                                                                      --------->DREB2C(1)                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                      --------->ATERF1(1)                                                                      --------->RAP2.3(1)                                                                      <------NtERF2                                                                      <---------ABI4(1)                                                                     <---------RAP2.6(1)                                                                     <---------RRTF1(1)                                                                     ------>NtERF2                                                                     <---------ATERF1(1)                                                                     <---------ORA47(2)                                                                     <---------DEAR4(2)                                                                     <---------RAP2.3(1)                                                                     <---------ERF1                                                                    <---------RRTF1(3)            --------->ALFIN1                                        <---------RRTF1(2)           <---          <---------TGA1a                                           <---------RAP2.6(2)         <----          <---------O2         <---------SPL7                       <---------RAP2.3(3)       <------          ==========================MYC_MYB                         <---------RAP2.3(2)       <------          --------->TGA1a   <-------GAMYB                           --------->ATERF1(2)       <------          <---------ANAC58 <---------MYB46(3)                       <---------ANAC46         <------MYB83          <---------ANAC58 --------->MYB111(1)                      <---------DREB2C(2)      <-------          --------->O2 <---------TOE2(3)               <---------DOF5.7(2)----------->HVH21  <------MYB46(1)          <---------ANAC46 --------->MYB55(2)       --------->YAB1  <---------DEAR3(1)      ---------      <-----------HVH21<---------TOE1(3)  --------->ALFIN1         <---------LBD16          <-------- ===================MYC_MYB--------->MYB111(2)    <---------WOX13(1)<---------ATERF1(2)  <---------MYB46(3)   gtttgaatcgtcgcgtgggaggcttaaggttgttggacgcgctggtgttgggattgataacgtcgatttggcggcggcgactgagtatgggtgtttggtt  6753000  Previous    Next  AGI:  At3g19480.1    Description:  D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative. similar to PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE), phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G17745.1); similar to EDA9 (embryo sac development arrest 9), NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G34200.1); similar to H0212B02.14 [Oryza sativa (indica cultivar-group)] (GB:CAH68268.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47860.1); similar to unknown [Populus tric Range:  from: 6752537    to: 6754791    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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