Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------------AGL15                 --------->LBD16            <----------DOF2             <---------ARR14(2)             --------------->AGL15             <---------GLK1(2)             --------->ARR14(2)            <-----------------AGL3             <---------ARR14(2)             --------->GLK1(2)   <---------At4g35610 ---------->DOF2          --------->ARR14(2)          <---------TOE2(3)   ---------->DOF2     --------->ANAC46<------ZmHOX2a(1)      --------->YAB1 <------ZmHOX2a(1)     ----------------->AGL2<----------ID1                ------   tttgtcaattttaagaatccagaggatgcagagaaagctgttgatgctttaaacggaaagaagtttgaggacaaggagtggattcttacaaaatcgaaaa  6698900                                                                                    <---------TOE2(3)                                                                             <---------ANAC58                                                                   --------->HSFB2a(2)                      ---------->DOF2                  <-----------HVH21     <---------ANAC46  <-----             --------->ARR14(2)                       --------->At4g35610    <---------ANAC58 -------             <---------ARR14(2)               --------->YAB1       <---------HSFB2a(2)--------->ARR11(3)             ------->TEIL               --------->ANAC58<------ZmHOX2a(2)<---------ANAC58    <------- ---->DOF2   --------->GLK1(2)          --------->ANAC58----------->HVH21<---------ANAC58    --------   agaagtatcagagtgaatctgaagtgaagcgaggtttgaaacaggctatcaaaaacagatcacagggttcgagtaacttgtgtgttaagaaattggatac  6699000   --------->MYB52(1)  <---------ARR11(3) --TEIL--------->At4g35610                                                     ----------->GT1   <--- -->CCA1(2)            --------->ARR11(3)              --------->AtLEC2       --------->ANAC46 <----- --ARR14(2)        ---------->DOF2   ------>ZmHOX2a(1) --------->ANAC58    <---------REM1(2)  <------ ->ARR14(2)----------->ARR10  <-----------GT1          --------->ANAC58  --------->ZAT14  <---------TOE2(3)   acgagtaacagatgagagcctcaaagacattttttcttcctatggaactataacatcatgcaaggtttgaaactctatacacagaaaaatttgaggtcgt  6699100                                                                        <---------ARR11(3)                                                 ----------->RAV1(1)    --------->ARR11(3)           <---------RVE1(1)              --------->YAB1            ---------->DOF2          <---------GLK1(2)              <---------ATHB12   <---------ANAC46          <---------ARR11(3)         <---------ZAT18      <---------ZAT14 ------MYB46(3)                     <-----------HVH21     --------->ZAT14 --GAMYB  --------->ARR11(3)       --------->bZIP60(2)    --------->ZAT18      <----------DOF2 ---MYB46(3)   <-----------GT1     --------->ANAC46       <---------ZAT18<------ZmHOX2a(2)   tgttggattcaagatttttacatttttgaatgtaaacaggtcactcatgagcgacaatagtggagtaagtcaaagatcaggctttgtttcatttttgaag  6699200                 <---------TOE2(3)                 <---------TOE1(3)                ---------->DOF2            <----------DOF2         --------->ANAC58         --------->ANAC58        --------->SPL7       ------>NtERF2                                                --------->YAB1       --------->ATERF1(1)                                         <---------YAB1       <------NtERF2                                              --------->AHL20(2)              ---      <---------ATERF1(1)                                         <---------AHL20(2)     <---------ZAT14      ----------->HVH21       <-----------GT1              --------->DAG2         ---------->DOF2----      <---------SPL7  <-----------HVH21  <---------GLK1(1)---------->DOF2   ----------->GT1     -----   ccagagggcggacgcttttaaagttgtcagtgataccctatgggtttctcaaaaaaaaaaaaaagtattttaataagagagtataaaagactaaactaaa  6699300                                                                                  <---------YAB1         ---------->DOF2                                                      <---------ANAC55(2)     <----------ID1                                                           <---------ANAC46   ---------->DOF2                                                            <---------YAB1 -------->GT1              <------------CBF                                <---------MYB52(1) <------ ----->DAG2           <------------CBF                                 <---------At4g35610   <------- ----->DOF2         --------->ARR11(3)         *TSS ---------->DOF2    --------->At4g35610   <-------   aagtaaaaagaaaaagaattaagacattgaattgagtagcaagttagaactaaattaagccccaaaactgatcagctgttatgtatgattcagtagcttt  6699400                                                                               ------>NtERF2                                      <----------DOF2                         --------->DEAR3(1)                               <---------ARR14(2)                             --------->MYB46(3)                               --------->ARR14(2)                            <------NtERF2                             --------->LBD16                                 --------->ATERF1(1)                            <---------ANAC55(2)                             ------>NtERF2                            --------->ANAC55(2)                             <---------ATERF1(1)                           <-------TEIL                                    <---------DEAR3(1)       ------->TEIL   --------->HSFB2a(2)                                  --------->DEAR3(1)  --------->YAB1      --------->HSFC1(1)                                <---------DEAR3(1) ----DOF2             <---------HSFB2a(2)                   --------->LBD16----------->HVH21        - --ANAC58             <---------HSFC1(1)                  <---------LBD16 <------NtERF2             < --ANAC58     <-------TEIL <---------LBD16       ------->GAMYB <---------ATERF1(1)         <---------ALFIN1   ccattgatgaatcaagttcatcttctagatgcggaactgtctttccttcaacccagcctctccggaggcctctctcggcgacgaccctcttccccatccg  6699500                                                                            ------->MYC4                                                                            ------->MYC3                                                                            ------->MYC2                                                                            <-------MYC3                                                                            ------->PIF5                                        ------->MYC3                        <-------PIF5                                        <-------MYC3                        <-------MYC4                                        ------->MYC2                        <-------MYC2                                        <-------MYC2                       --------->O2                                        <-------MYC4                       <---------TGA1a                                        ------->MYC4                       <---------O2                                        ------->PIF5                       --------->TGA1a                                        <-------PIF5                       ===============MYC_MYB                                       <---------ANAC55(2)                 ==========================                                       --------->O2                        <---------ANAC55(2)                                       <---------O2                        --------->ANAC55(2)                                       --------->ANAC55(2)               <---------ALFIN1                                       <---------TGA1a                --------->ANAC46                                       --------->TGA1a            --------->ALFIN1                                     <------------OsbHLH66      <---------ANAC58  <-------GAMYB                                     <---------ALFIN1           --------->At4g35610                                  --------->ANAC46              <---------At4g35610                               <---------ZAT18   <---------AHL20(2)  --------->ZAT18                          <---------ARR14(2) <---------MYB46(3) <---------bZIP60(2)          ------->TEIL    --------->ARR14(2) ----------->GT1    <---------ANAC58 --------->MYB52(2) ----->ZmHOX2a(1)<-----------GT1  <---------ALFIN1              <---------ANAC46 <---------MYB46(3) ---------MYB52(1) --------->ZAT6--------->MYB46(3)     --------->TOE2(3)<------------OsbHLH66-------   tccttaggtatgcattttttgacactccgatactgcccaccacgtgtttgttaaaatgccttagtgaggtgtccaccacgtgtttgttgaaatgtctaac  6699600                                                                                        <---------ZAT2                                                                                        <---------At4g35610                                <---------bZIP60(2)                                     --------->ZAT2                                <---------REM1(1)                                       --------->At4g35610                                <---------ANAC58         <---------HSFC1(2)           ---------->CDC5                                <---------ANAC58  <---------ARR14(2)                  <-----------RAV1(2)                                <---------ANAC46  --------->ARR14(2)             <-----------GT1                                <-----------RAV1(1)      --------->HSFC1(2)  <-------MYC3                     --------->ZAT14           <---------HSFC1(1)          <---------TOE1(2)                     <---------ZAT14           --------->HSFB2a(2)         <---------TOE2(2)    <----       <----------DOF2          --------->ALFIN1--------->LBD16           <---------ALFIN1 ------>NtERF2  <-------TEIL  <-------GAMYB<---------AtMYB61 <---------HSFB2a(2) <---------ANAC58 --------->TOE2(3) =================bZIP_DOF   --------->ALFIN1  --------->HSFC1(1)  <---------ANAC58 --------->TOE1(3) -->MYB52(1)   <-----------RAV1(1)       <---------ALFIN1--------->HSFB2a(1) ------->MYC3  --------->LBD16   tgagttcatctttggctctgttgtacagagagtggtgtggcctccacttccagaaacgacgcttctatttcgtctcccacgtttaacctcagccgcgagt  6699700                                                           <---------WRKY18(1)                                                       --------->MYB55(2)                                                       <---------MYB46(3)                                                  <-------MYC2                                                  ------->MYC3                                                  ------->MYC2                                                  <-------MYC3                                                  ------->PIF5                                                 ==============MYC_MYB                                                 --------->TGA1a                                                 <---------O2                                                 ============MYC_MYB                                                 --------->O2                                                 <---------ANAC46                                         --------->ANAC55(2)                                        <---------LBD16--------->MYB111(2)                                       <---------DOF5.7(2)--------->WRKY38(1)                                      <-------TEIL<-------PIF5                                     <-----------HVH21<--------P                                  <---------TOE2(2)  <-------GAMYB                                  --------->SPL7 <---------TGA1a                                  ------->TEIL   --------->ANAC55(2)                                  <---------TOE1(2)--------->ALFIN1                   <-----------HVH21 --------->DOF5.7(2)<-------GAMYB        --------->ATHB12       <----------DOF2            <-------TEIL   ============MYC_MYB        <---------YAB1 ------>MYB46(1)    --------->ANAC58            <---------SPL7<-------TEIL--------->WRKY12--------->YAB1   -------->P    --------->ANAC58          <---------------AtSPL3<---------MYB46(3)   <-------TEIL   --------->MYB46(3) ----P <---------DAG2       --------->ANAC46 <-----------HVH21<---------MYB59<---------ICU4------>MYB83   tggctcacgcttttcaaaccccttcataccacgacgtacgttcacgggttcacgtggttgttgaccttacacaaattcatcatcggctcatccaaccaga  6699800  Previous    Next  AGI:  At3g19323.1    Description:  pseudogene of poly(A) binding protein Range:  from: 6698520    to: 6699160    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g19330.1    Description:  polyadenylate-binding protein-related / PABP-related. Identical to UPF0496 protein At3g19330 [Arabidopsis Thaliana] (GB:Q9LT84;GB:Q3E7M1;GB:Q3EB43); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67266.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Range:  from: 6699347    to: 6701306    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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