Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->TOE2(2)             --------->TOE1(2)            <---------ANAC55(2)       <---------YAB1     --------->YAB1     <---------ICU4                                                                               <--    --------->ICU4                                                                             ------  <---------ICU4                                                                              <------ZmHOX2a(2)  --------->YAB1                                                                             -------- <---------AHL20(2)                                                                          <------- --------->AHL20(2)                                                                          -------- <---------ATHB51                                                                            <------- --------->ICU4        <---------ANAC58                <---------ANAC58                     --------- -------AHL20(2)       <---------ANAC58                <---------ANAC58                     <-------- ------>AHL20(2)       <---------ANAC46                <---------ANAC46               <---------ARR14(2) ----->AHL20(2) ----------->ARR10                 <---------GLK1(2)       ------>MYB46(1)--------->ANAC55(2) --->YAB1 <-----------GT1              --------->MYB111(2)                ------>MYB83--------->ARR14(2) -->AHL20(2)----------->RAV1(2)        <---------MYB46(3)               <---------MYB59  <---------ANAC55(2)   taaataattatgttacctgagatttgtgtggaagatggaagttgttggaatggattttcttggacttgttgagacctaatttccaccagttacgagatcc  6649700                     --------->ARR14(2)                     <---------ARR11(3)                       <---------At4g35610        <---------------AtSPL8                                ------>ZmHOX2a(1)        <---------------AtSPL3                           <----------DOF2 --------DOF2        --------->ARR11(3)                  ================================bZIP_DOF >ZmHOX2a(2)         --------->GLK1(2)             --------->TGA2(1) ->ARR11(3)          <---------ARR14(2)            <---------ANAC58            <---------O2 --ARR14(2)         <---------GLK1(2)              <---------bZIP60(1)         <---------TGA1a     -- ->ARR14(2)       ----------------------->TaNAC69(2)<-----------TGA1           ====================== --ARR11(3)    <-----------HVH21                   --------->bZIP60(1)         --------->O2       --- >GLK1(1)   --------->SPL7                         <---------ANAC58--------->ZAT14   ----------->RAV1(1) -GLK1(1) <---------SPL7    <---------ZAT18        <---------TGA2(1)           --------->TGA1a   ----   ctttgatgagatggtacggtcagaatcttgagcacttaattcatctctaagtgtcgtcactttcctctgagtagtcttctcaagtggcaacaaaactcca  6649800                   <-----------RAV1(2)                   <------NtERF2                  --------->LBD16                 --------->DEAR3(1)                 --------->RAP2.3(2)                 --------->RAP2.6(2)                 ----------->RAV1(1)            --------->At4g35610            <---------At4g35610        ------>ZmHOX2a(2)       <------ZmHOX2a(2)                                                      --------------->AtSPL8      <-----------ARR10                                                      <---------ANAC46      --------->ARR14(3)                                                     <---------ANAC58      <---------ARR11(3)                                                --------->ZAT2  --------->At4g35610      --------->ARR14(2)                                                --------->HSFC1(2)      --------->ARR11(3)                                                <---------At4g35610      <---------ARR14(3)                                                --------->HSFB2a(1)      <---------ARR14(2)                                                <---------HSFB2a(1)      <---------AGP1                                                  <------ZmHOX2a(1) ----------->RAV1(2) -------->DOF2 <---------At4g35610                                 <-----------RAV1(2)  <---------At4g35610 =========bZIP_DOF--------->At4g35610                       --------->LBD16  <---------ANAC58 ------>AtMYB61--------->At4g35610                     --------->GLK1(1)--------->At4g35610 ----->ANAC46--------->MYB46(3)                        <---------GLK1(1)<---------HSFC1(2)-----------   ccaaagaagatctcatcagccgcagaagtgaaaccgaagttttcgacattgaatttgaaatccgaagaaacaggagcttccttgtacttcatctgaccat  6649900                       <---------YAB1                             --------->ANAC46             <---------TOE2(2)                              <---------ANAC58                    -----            <---------MYB52(1)                              <---------ANAC46          <------ZmHOX2a(1)           <---------SPL7              --------->ATHB12     <---------ANAC58         <---------YAB1          <---------ANAC58             <---------ICU4   <---------ANAC58            <---------TOE2(3)          <---------ANAC46             -------->ATHB1 --------->GLK1(2)            --------->YAB1          <---------ANAC58            <---------YAB1 <---------GLK1(2) <------ZmHOX2a(1) --------->KAN4(1) >HVH21  --------------->AtSPL3      <---------ARR11(3) <---------ANAC58  ----------->GT1<---------KAN4(1)   ctgctcttgatgccgtatgtttactatcactgtctgcaaaatcattggagaacgagattcttgcgtctacgaaggatggatacaatgaggattgttctac  6650000                                <----------DOF2                          --------->ZAT14                        --------->ANAC46                     <---------REM1(2)            <---------ANAC58             <---------YAB1                     --------->ZAT14  --------->ZAT14                        ----------->GT1        <---------CCA1(2) <---------ZAT14         <---------ANAC58  <---------ZAT6 *TSS          <--- ---->ANAC46         <---------ZAT14  <---------ZAT14    <----------DOF2 <---------YAB1 --------->AtLEC2   agcattagccatctctctctctctacactgaacactttagttcagtaagtttgcttcttcttttgtgctagtcttaaaattgtgattttcatgcatcaac  6650100                --------->CCA1(2)         <---------AHL20(2)              --------->ZAT18        <-----------TBP                  <---------ZAT18      --------------->AGL15  --------->ANAC58      <---------------AGL15  --------->ANAC58                                             <---------YAB1 ------>ZmHOX2a(1)         <--------P  <-------MYC3     <---------AHL20(2)              <---------AHL20(2) ------ARR11(3)--------->ARR11(1)      ------->MYC3<----------DOF2              <---------YAB1   atcctttgcattttatagatatgagactggtaaggcatccatgtggacttcatcttttttaattctttcttctattcatcttatttttgtttatttttaa  6650200                                                                     <---------AHL20(2)                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                <---------AHL20(2)               <-----------GT1                            <----------DOF2         <---------AHL20(2)                               <---------DAG2     <---------AHL20(2)         ----------->GT1    ------->TEIL--------->AHL20(2)                ----    --------->AHL20(2)<-----------GT1           <---------ATHB12--------->AHL20(2)        <---------ANAC46   gtccgatttattttatatttctatatacaatactgagtaaaaccgattcaatgaactcaactttatttaattttatagttttgacttaatcttcgtggat  6650300                                             <---------ANAC46                                        <---------ICU4                                       --------->ICU4                                   --------->LBD16                                  --------->RAP2.3(3)                                  --------->RAP2.3(2)                                              <-                                  ----------->GT1                                                  --                           ---------->DOF2   <---------ANAC58                                  <-----                 <---------WOX13(1)--------->At5g28300                                     --------->AHL20(2)              --------->ICU4      <---------ANAC46     ----------->GT1         <---------YAB1  ------              <---------YAB1     --------->RAP2.3(1)  --------->DAG2 <---------ARR14(2)   <---------ARR11(3)     --------->YAB1     --------->TOE2(3)    <---------ANAC58    ----------------->AGL3   --------->AHL20(1) ----->AHL20(2)--------->ATHB12  <------NtERF2      ---------->DOF2  --------->ARR14(2)   <---------AHL20(1)   aaaataagcataagtattgattgaagcattaatgcgccgtaaatatggcttaagtaaaggtgataactccaaatttggattatagttctcaaaatattta  6650400                                                                  --------->YAB1         ------>MYB46(1)                                          <---------ICU4         ------>MYB83         <---------TOE2(3)                  <---------ATHB12        ----------->RAV1(1)  ---------->DOF2                   --------->WOX13(1)    <-----------GT1         --------->AHL20(2)                --------->AHL20(2) --------AHL20(2)           --------->YAB1                    <---------AHL20(2) ------->AHL20(2)        --------->WOX13(1)              <---------MYB59           <---------AHL20(2) ----AHL20(2)         --------->TOE2(3)              --------->ETT(2) <---------ICU4              <-- --->AHL20(2) --------->AHL20(2)   <-------TEIL      --------->MYB46(3)  <-----------GT1          <--   tttatattaccaacaaaaaaataacatcaattaaagtttcatttgatatttttcatcgaccgaattaatcaatatttacacttattttaaaatttagtat  6650500       --------->LBD16       <---------At4g35610       <------NtERF2       --------->At4g35610                                 <----------DOF2      --------->ANAC46    --------->ANAC58                 --------->TOE2(3)     <---------LBD16      --------->ANAC46              --------->ARR11(3) ---------GT1 <-----------GT1        --------->TOE2(3)  <---------ARR11(3) -------AHL20(2)          --------->ANAC58       <---------ARR11(3)                 ----------->GT1   atacttgtccgcagtataactatctataacgcaatacaaacttaaaaccaatatcaactatctttaatccaatatttgtatatgtttggataaaacttca  6650600  Previous    Next  AGI:  At3g19200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61148.1) Range:  from: 6649234    to: 6650083    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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