Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                          --------->AHL20(2)                                     ----                                          <---------AHL20(2)                                  <------ZmHOX2a(1)                                --------->WOX13(1)              ---------->DOF2          ------>MYB46(1)   <---------ATHB12           <---------ATHB12            ----------->GT1                -------->P ------->RAV1(1)       <----------ID1  --------->WOX13(1)<---------WOX13(1)              ------>MYB83   cacaaatcaacatgtccgaattaagagaacaaatcaattagcaattaaacttcaaacagattgaaaaaaagaagtatatgtgaaaaattccaaccaggat  6631600                          <------NtERF2                         ------>NtERF2                       <------NtERF2                      <---------RRTF1(1)                      <---------ERF1                      ------>NtERF2                      <---------ATERF1(1)                     <---------DEAR3(1)                                         <---------ARR14(2)                     --------->DEAR3(1)                                         --------->ARR14(2)                     <---------RAP2.3(3)                                       --------->GLK1(1)                     --------->O2                                         <------NtERF2                     <---------O2                                        <---------SPL7                     <---------RAP2.3(2)                                --------->ALFIN1                    --------->ATERF1(1)                                 <---------ANAC46                   ------>NtERF2                                        <---------DEAR3(1)                   <---------ATERF1(1)                                 <------NtERF2                  ----------->HVH21                                    <---------LBD16                  --------->ETT(2)                                     ------>NtERF2               --------->ALFIN1                                       <---------RAP2.3(1)             <---------ANAC58                                         <---------RRTF1(1)             <---------ANAC58                                         ------>NtERF2 ------>ZmHOX2a(1)             <-----------RAV1(1)                                     <---------RRTF1(3)          <--------P<------NtERF2                                    <---------RAP2.3(2)         <-------GAMYB<---------DEAR4(2)                             <---------DEAR3(1)      <---------ANAC46<---------RAP2.3(1)                            <---------RRTF1(2)     <---------At4g35610<---------ANAC46                            <---------LBD16--------->TOE2(3)    <---------ANAC46<---------------------WRI1                     <-----------RAV1(1) --------->ALFIN1 <---------DEAR3(1)                     --------->ZAT6--------->ATERF1(1)     <----- ------>DAG2 <---------ANAC46                         ----------->HVH21<---------At4g35610   <------- ------>DOF2 --------->ALFIN1              <---------ZAT14       <---------ZAT2<---------GLK1(1) <---   aaagtggagcgggttgtgtggcgacggcgcgaacagagaggcgagagaactgcccattgacactgcgaactgcggcggagggaatcctcaaacctcgtcg  6631700                                                                           <---------ETT(2)                                                                           --------->DEAR3(1)                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                         <-----------HVH21                                                                        <---------ANAC46                  ------>NtERF2                                         --------->DEAR3(1)                 --------->DEAR3(1)                                     <---------ATERF1(2)                --------->RAP2.3(1)                                     --------->ATERF1(2)               --------->ANAC46                                        --------->ATERF1(1)               --------->LBD16                                     --------->ZAT2              <---------ATERF1(2)                                  --------->At4g35610              --------->ATERF1(2)                                  <---------ZAT2            --------->MYB52(1)                                     <---------At4g35610       --------->O2                                          --------->ANAC58       <---------O2                  <---------DEAR3(1)      --------->ANAC58  ---------->DOF2----------->HVH21<---------ARR14(2)        <---------LBD16<---------DEAR3(1) ----DEAR3(1)--------->DEAR3(2)  <---------GLK1(1)        <---------ARR14(2) ----HVH21  -------->P         <------ZmHOX2a(1)        ----------->HVH21------>NtERF2 ---NtERF2--------->ETT(2)    ----------->GT1    <---------RAP2.6(2)  ------>NtERF2   gagcaaaagacgtctaccggcgactgagggagaggaaattcggcgaagattgcgactggggacacggagagctgccgtcgacgatgtgagagacatgtaa  6631800                                                                                               ------                                                   --------->At4g35610                       --------                                              --------->HSFB2a(2)                            <-------              ---------->DOF2                 <---------HSFB2a(2)                            <-------          --------->MYB52(1)                  --------->LBD16                             --------->AHL20(2)         ----------->HVH21                   <---------ANAC46     <---------SPL7 --------->MYB52(1)         ----------->TGA1                   <---------LBD16      --------->HSFC1(2) --------->LBD16 -        <---------MYB52(2)               <---------At4g35610     <---------HSFB2a(1)----------->GT1 <        --------->DEAR3(2)               <---------ZAT2          <---------HSFC1(2)--------->HSFB2a(2)       <---------At4g35610               --------->ZAT2          <---------DEAR3(2)<---------HSFB2a(2)       --------->At4g35610          <------ZmHOX2a(1)         --------->CCA1(2)  -------->P  --------     --------->ZAT18   ---------->DOF2   --------->At4g35610  ------------>AtMYB77<---------LBD16  <-   gagcgagggaactgacgaaagaagcgaaagaatagagaggacgagctgcgcgaagctaaacaagagacggttcggagcatagctaccggaaaaaaaatat  6631900      <---------ARR14(2)     <------NtERF2     --------->ATERF1(1)    --------->LBD16    <---------ATERF1(1)   <---------ANAC46   <---------DEAR3(1)  <------NtERF2 ------>NtERF2                                   --------->At4g35610 --------->LBD16                    --------->ARR14(2) --->KAN4(2)             --------->ANAC58        ----------->GT1 ->ARR11(3)              --------->ANAC58  ---------->DOF2       ------->GAMYB --AHL20(1)        <---------ANAC46 <---------ARR11(3)         --------->SPL7 --ARR11(3)      --------->MYB52(1) --------->ARR11(3)        --------->MYB52(1) -------->ANAC46----------->HVH21   <---------ARR14(2)        ------>MYB46(1) ---------LBD16 ----------->TGA1   <------ZmHOX2a(1)          ------>MYB83     <---------YAB1<------- ->AHL20(1)<---------At4g35610   <---------TOE1(3)         --------->ANAC46   <-----------GT1<------- --------LBD16<---------At4g35610<---------TOE2(3)       <-----------GT1----------->GT1      <-------   tcccggcggagactgctactgacggagacgaaattaaggatattgcaaagaagctaaataaacccaacggcaagaggttttatccttgtgtagttgtgtg  6632000                                                                        ----------->GT1                                                                      <------------CBF                                                                     <---------ICU4                                                                     --------->ATHB12                  ----------->GT1                                    -------->ATHB1                 --------->DAG2                                      --------->ATHB51                ---------->DOF2                                     <---------YAB1              XXXXXXXXXXXXXXXXXXXX>MIR1886.1                   --------->ANAC46            <------ZmHOX2a(1)                                --------->ANAC46      --------->REM1(2)                                      --------->ANAC58    <---------------AGL15              *TSS                  --------->ANAC58    =================================================================================================    --------------->AGL15           --------->AHL20(2)   ----------->RAV1(1)    --------->ARR11(3)   <---------AtLEC2            --------->AHL20(1)  <---------------AtSPL8       <---------ARR11(3)   <---------ANAC46            <---------AHL20(2)  --------------->AtSPL8       --------->AHL20(1)   <---------ANAC58            --------->AHL20(2) <---------ANAC58  <---------ATHB51          <------   <---------ANAC58       <---------AHL20(2)      <---------ANAC46  --------->ICU4<---------GLK1(2) --ANAC58  ----------->GT1--------->AHL20(2)      <---------ANAC58  <---------AHL20(2)        <------ --ANAC46 ----------->GT1 --------->AHL20(1)   <---------CCA1(2)    --------->AHL20(1)       <------- --ANAC58 ------------------------>ANAC81  --------->TOE2(3)------->GAMYB       <---------AHL20(1) <-   tttttgcttgtagaggaaaaaagtaaaataaaataaaatgaaatacctcatttcttgtacaacacacaaaattattgtgaaaaatattctctattttact  6632100                                                            ---------->DOF2        <---------AHL20(2)                                --------->ANAC58        <---------AHL20(1)                                --------->ANAC58    <------------------------ANAC81                --------->ARR14(2) ===========MADS_MADS                              <---------ARR14(2) --------->ALFIN1             <- -----------AGL1                               <---------At4g35610   ------->MYC3                  -- -----------AG                                 --------->At4g35610   <-------MYC3                <--- ----GT1--------->AHL20(2)             ---------->DOF2  <---------AtLEC2                         <--- -----------CBF                 <------NtERF2 --------->ALFIN1      <---------O2                 <---   aaattggcattttatttttctgaatttttaagtcgggacaaaaaagaggtgctgatttgcaagaaaggaaacgtggttctcatatagccaaatgtgtttg  6632200                                          --------->ARR11(3)                                          --------->AHL20(1)                               <---------ICU4                              --------->ICU4                              <---------YAB1                            --------->YAB1<---------ARR11(3)  --------->ARR11(3)                           <---------AHL20(2)           <-----------GT1                    <---------         <-----------GT1  <---------AHL20(1)     <---------ARR11(3)                        --------->GLK1(2) ----------RAV1(1)        --------->AHL20(2)     --------->ARR11(3)                        <---------ARR11(3) ------->ALFIN1           <---------AHL20(2)    <---------CCA1(2)                          --------->ARR14(2) ------ANAC46             --------->AHL20(1)--------->TOE2(3) <---------ARR11(3)     <-----------GT1 ------ANAC58          --------->AHL20(2)--------->RVE1(1)  <---------YAB1       --------->ICU4 ------ANAC58    ------>ZmHOX2a(1)       --------->CCA1(1)--------->YAB1      ---------->DOF2       -   agtgttgcaatttgctatcctccaaaaatataatgactacaaaatatcttaaatcttttttcatgatattaaacttaagtgaaagtattacaaaatctga  6632300                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                 <---------AHL20(2)                           <----------DOF2                                       --------->AHL20(2)             --------->ANAC46                ----------->GT1                    --------->AHL20(2) --ARR10     <-----------GT1           <---------AHL20(2)            --------->AHL20(2) ---------->GT1--------->ANAC46 --------->LBD16       --------->YAB1 <---------AHL20(2)   tcaagttaaaagtttacaccagacatatactttccaggtatttgattcagaaaaaatcatattgatcagatttaaacaaattttaaattatatataagtt  6632400                                                         <---------ANAC58                   --------->TOE2(3)                     <---------ANAC58                <-----------GT1                     <----------CDC5              --------->AHL20(2)              <---------ANAC58       --------->ANAC58                       <---------ANAC58       --------->ANAC46                    <--------P   --------->At4g35610                      <---       --------->ANAC58   <---------ICU4<---------ZAT6  --------->ZAT2                       <------NtERF2   ttttcttacacacaaattaaacctttgatcagtactagactactggtagcatgcgatgagcttgcagtagtttctctcgcacattagttatgggccgaga  6632500  Previous    Next  AGI:  At3g19170.1    Description:  ATPREP1/ATZNMP (PRESEQUENCE PROTEASE 1); metalloendopeptidase. Identical to Presequence protease 1, chloroplast/mitochondrial precursor (PREP1) [Arabidopsis Thaliana] (GB:Q9LJL3;GB:Q8RUN6); similar to ATPREP2, metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT1G49630.1); similar to ATPREP2, metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT1G49630.3); similar to ATPREP2, metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT1G49630.2); similar to hypothetical protein OsI_008851 [Oryza sativa (indica cultivar-group)] (GB:EAY87618.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47789.1); similar to hypothetical protein OsJ_008 Range:  from: 6625427    to: 6632039    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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