Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------ARR14(2)                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                               --------->DEAR3(1)                                                                              --------->RAP2.3(1)                                                                              --------->ATERF1(1)                                                                              --------->DEAR4(2)                                                                             <---------RAP2.3(1)                                                                             --------->ABI4(1)                                                                             ------>NtERF2                                                                             <---------ATERF1(1)                                                                            --------->ANAC46                                                                            <---------DEAR3(1)                                                                            <---------ATERF1(2)                                                                            --------->ATERF1(2)                                                                            --------->RAP2.3(3)                                                                           --------->RAP2.3(1)                                                                           --------->ATERF1(1)                                                                   <---------ICU4       --------->ARR11(3)                                                                   --------->YAB1       --------->ARR14(2)                   --------->ANAC55(2)                            <---------YAB1------>NtERF2                   --------->ANAC46                      --------->At4g35610--------->RAP2.3(2)                   <---------ANAC55(2)                   --------->ZAT2    --------->DEAR4(2)                   --------->ANAC55(1)            <-----------RAV1(1) <---------ICU4  <---------MYB46(3)                   --------->ANAC58               <---------MYB46(3) <---------YAB1  <---------ANAC46       --------->ARR11(3)              <-------TEIL      <---------At4g35610--------->DEAR3(1)      <------ZmHOX2a(1)  --------->ARR11(3)    --------->GLK1(2)--------->YAB1<------NtERF2   <---------ICU4  --------->ANAC58  --------->ARR14(2)  <---------ZAT2    --------->ERF1 ----->At4g35610  <---------LBD16    <---------ARR14(2) <-----------RAV1(1)--------->ORA47(2) <------ ------At4g35610 <-----------GT1    <------ZmHOX2a(1)  <---------RAP2.6(2)<---------ATERF1(1) <------ ---At4g35610 <---------YAB1      <---------TOE2(3)   <---------At4g35610--------->DEAR3(1)   <------   gctgataaggaccttgattatacggaacatattgatgaggatacatcagcatctgttgctgctgcatcatcatcatcgccgccgctggtggatattgcat  6613700                                         --------->ZAT2                                         <---------ZAT2                              <---------MYB52(1)                                         --------->ZAT14                            --------->LBD16                                         <---------ZAT14                           <---------HSFB2a(2)                                         --------->At4g35610                       --------->HSFB2a(2)                                --------->At4g35610                               <---------LBD16                                <---------At4g35610                               <------NtERF2                                <---------ZAT2                                  <---------ARR14(2)                             <---------ZAT2                                  --------->ALFIN1                             --------->At4g35610                           <---------ANAC46                            <-----------RAV1(1)                           <------NtERF2                           <---------RAP2.6(2)<---------ANAC46           <---------DEAR3(2)                       <-------GAMYB <---------ALFIN1        --------->MYB52(2) <---------PCF2      --------->MYB46(3)  <---------At4g35610<---------AtMYB61<-------GAMYB--------->ALFIN1  --------->MYB46(3)  <-----------RAV1(1)<---------At4g35610 <---------MYB46(3) --------->ARR14(2) <------NtERF2        <XXXXXXXXXXXXXXXXXXXXMIR834     --------->ALFIN1   <---------MYB46(3) ---ANAC58       <-------GAMYB  --------->ZAT2<---------bZIP60(2)       <---------DEAR3(1) ---ANAC58      <-----------RAV1(1)------>NtERF2     <------ZmHOX2a(1) <---------ABI4(1)--------->HSFC1(2) ---AtLEC2<-----------RAV1(1)<---------At4g35610--------->ALFIN1     <---------DEAR3(1) <---------HSFC1(2)   ggcagccatccactgttgctgttgctgttgctgctgctgccactgctgaggtggaggaggggtttgttgattcggcggtgtggctccggaagttgccaac  6613800                                                ---------->DOF2                                              --------->LBD16                                             <---------HSFB2a(2)               <-------GAMYB                 --------->ANAC46               <---------ANAC58              --------->HSFB2a(2)               <---------ANAC58             <-----------------AGL1              --------->MYB52(2)            <---------LBD16              <---------MYB46(3)            ----------------->AGL1              <------MYB46(1)               <-----------------AG              <------MYB83                ------>ZmHOX2a(2)             <---------AtMYB61           <---------GLK1(1)            <---------MYB52(1)           --------->GLK1(1)          <---------MYB46(3)            --------->ARR11(3)  <-----------ARR10                  ------>ZmHOX2a(2)  <---------ARR14(2)               --------->ARR14(2)  --------->ARR14(2)               <---------ARR14(2)                                            ----  --------->GLK1(2)     ------->TEIL<------ZmHOX2a(2)        <---------GLK1(2)               --------  ------->TEIL--------->MYB55(2)------>ZmHOX2a(2)  ----------->GT1                <-------TEIL  <----   gtcgaatctgagccgttggttgtctgcatcttgatccgatctgatctccggaaagggaaaacagagtctccgagttgttttagattcaagagtttcgaga  6613900                     <---------ANAC58                     <---------ANAC58                   <-----------GT1               --------->ARR11(3)               --------->AHL20(1)               --------->AHL20(2)                                            <------NtERF2          <---------YAB1                    ---------->DOF2                 --------->LBD16 <<<<<<<<<TBF1 <---------ARR11(3)       ---------->DOF2       <---------At4g35610 ----->GLK1(2) <---------AHL20(1)    <---------ANAC58         --------->At4g35610      --------->CCA1(2) ->HSFB2a(2)   <---------AHL20(2)    <---------ANAC58    <-------GAMYB     <---------ANAC46 -----GLK1(2)------->TEIL        --------->ALFIN1    <---------ZAT2       <---------LBD16 <---------TOE2(3)   ttcttcttctctatgaatatatttcgttccaacaagtgtgcgtaaagaaagtgagagctcgttgagctctggtaatggcggagagagagatagaggtaga  6614000                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                               ------                                                                                              -------                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             --------                       <------NtERF2                                                     <------NtERF2                     <---------ANAC46                                                    <---------RAP2.6(3)                  <---------DEAR3(1)                                                    --------->RAP2.6(2)             ---------->DOF2                                     ------------>CBF   --------->ALFIN1      <------MYB46(1)<---------DEAR3(1)                  <---------TOE1(3)    <---------HSFB2a(2) ---      <------MYB83--------->ALFIN1                   ================================================     --------->MYB59<------NtERF2    <---------ZAT14 <----------DOF2          --------->HSFB2a(2)<---   --------->CCA1(2)--------->ATERF1(1)           *TSS   <---------TOE2(3)   <---------LBD16 <-------   gagagatttggtcttaaaaggaggcggagagagagagagagaagtgagttaatgggtttaaggctgaaacaatgggtcttggggaagtggccgaaacgtg  6614100 ---->NtERF2 --------PCF5 ------->PCF2 --------TCP15(1) ------>TCP15(1) -------PCF2 --->ALFIN1          --------->ALFIN1 >MYC3  <---------ANAC55(1)                                                         <-----------GT1 -MYC3  <---------ANAC58                                                       --------->ATHB51 ->TGA1a--------->ANAC55(2)                                                    --------->AHL20(2) --TGA1a<---------ANAC58                                                       <---------ICU4 ->O2   <---------ANAC46                      <---------YAB1                   <---------AHL20(2) ------>TCP20      <---------ANAC46      ------>NtERF2 --------->DEAR3(1)  --------->AHL20(2) ==bZIP_DOF        <---------ANAC58     <---------RAP2.3(2)                <---------AHL20(2) ------TCP15(2)    <---------ANAC58     <---------DEAR3(1)    <-----------GT1 --------->ICU4 --O2   <---------ANAC55(2)         <------ZmHOX2a(2) --------->ANAC46    --------->AHL20(2)   gggcccatttacgtgcttaagccgtgttgttttttgagatcgacggctctgattccaccgcatttagccacttacatttaattatttcaccttctagggt  6614200                            ----------->GT1                            <---------ANAC46                       <---------ICU4                       --------->YAB1                       -------->ATHB1                            <-----------GT1              -------                      <---------ATHB12                      <---------YAB1                    <------                      --------->ICU4              <---------ANAC55(2)                         <------                      <---------YAB1              <---------ANAC46                            -------               <----------DOF2                    <---------ANAC55(1)          <-----------HVH21               <---------DAG2                     <---------ANAC58 <------------MYB.PH3(1)  <--------           ------->GAMYB   <---------MYB46(3)     --------->ANAC55(2) <---------MYB52(1)  <----------        <-----------GT1--------->ATHB12           <---------ANAC58<---------At5g28300---------->DOF2 --------->AHL20(2)<---------AHL20(2)           <-----------GT1  --------->MYB52(1)<---------YAB1   ttttaaaatataactgactttttaatcattgggtaaaaacaaaaacatatttacgtgataatatgattaaccgttttgtactgtcatgaaagagtcagct  6614300       <---------ZAT18                     <---------At5g28300       --------->ZAT14                    <-----------GT1                           --------->GLK1(2) -->At4g35610                           <----------DOF2                             <---------ARR14(2) ---ZAT2                              <---------RAP2.6(3)                           --------->ARR14(2) ---At4g35610                   ------->GAMYB                                 <-----------GT1 -->ZAT2                      <---------At5g28300               ---------->DOF2  ------->GAMYB ---RAV1(2)                  <-----------GT1          --------->At5g28300     --------->MYB52(1)   <- -HVH21<---------ZAT14       --------->MYB52(1)      ----------->GT1  ----------->GT1        ------->TEIL   gttctacagtaaactctaggcctatgcaaattaaccgagccgttttactgttctacagtaaattttaaaagtatgtaaattaaccgaatcggatgtatcg  6614400                                                                                    --------->MYB52(1)                                                                                    ------>MYB83                                              ----------->GT1                       ------>MYB46(1)                                             <-------TEIL                         <---------MYB46(2)                                            --------->CCA1(2)               --------------->AtSPL3                                            --------->ARR14(1)              --------------->AtSPL8                               --------->TOE2(3)      --------->MYB52(1)  --------->GLK1(2)         ----------->GT1<---------AHL20(2) --------->ARR14(2)            <---------GLK1(2)   --------        <---------TOE2(3)<---------ICU4    <---------GLK1(2)     <---------RVE1(1)--------->AtMYB61       ---------->DOF2  --------->AHL20(1) <---------ARR14(2)    <---------CCA1(1)<---------MYB59 --------->LBD16        --------->AHL20(2) --------->ARR11(1)   --------->ARR11(3)--------->MYB46(3) --------LBD16         --------->AHL20(2)<---------ATHB12       <---------ARR11(3)<---------MYB111(1)   aaccggaactaaagtaaaaaaaaaaaaaaattacattaaaccaaagattcgaaaaaaaacagaatagatattttagaatcggtaccaaaccgatataaaa  6614500                                              --------->ARR11(3)          --------->AHL20(1)                                              <---------ARR11(3)          <---------AHL20(1)                                              --------->AHL20(1)          <---------ARR11(3)                                              <---------AHL20(1)       --------->AHL20(2)                                           --------->AHL20(2)      --------->YAB1               -----                                          --------->AHL20(2)   <---------AHL20(2)               -----   --------->YAB1   ----------->GT1    --------->YAB1         --------->AHL20(2)       ---------->DOF2   <---------AHL20(2)                 <---------AHL20(2)  <---------ARR11(3)          --------->AHL20(2)   --------->AHL20(2)      --------->YAB1 --------->YAB1  --------->AHL20(1)       --------->YAB1   - ->AHL20(2)       ---------->DOF2 --------->AHL20(2)    --------->GLK1(2) --------->ARR11(3)>>>>>>>>>   tacaattatatatccaaaacaaaagttatttataaactaaataataaaaatatttgagaatatataaaatcataaaaatattcaaaaataaaagaaaaat  6614600  Previous    Next  AGI:  At3g19130.1    Description:  ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding. similar to ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A), RNA binding [Arabidopsis thaliana] (TAIR:AT1G49600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47776.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 6611204    to: 6614050    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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