Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------YAB1                                                                     <---------ZAT18     --------->ICU4                                                               --------->ANAC58    <---------TOE2(3)        --------->ZAT6                                       --------->ANAC58 -------->YAB1      <---------ICU4                                           <---------ICU4 >GAMYB             --------->YAB1             ---------->DOF2     ------>ZmHOX2a(2)    --------->ZAT14 >At4g35610        --------->ICU4      --------->GLK1(2)   <---------GLK1(1)--------->ICU4 -At4g35610      --------->YAB1  ---------->DOF2--------->DAG2    --------->GLK1(1)     <---------ZAT14   gaaaataatgtttagtgtctcataatcactaacacaaaaggaatctaagaaaagttccaagagttctgatctctagtatttatgacgcactggactccaa  6574900                  --------->LBD16                                                                   <                 <---------HSFB2a(2)                               <---------TOE2(3)                <                 --------->HSFB2a(2)                    ------>MYB83                             <---                <---------LBD16                         ------>MYB46(1)                          <---              <-----------GT1  --------->YAB1          --------->WOX13(1)          ---------->DOF2  -   cttaacaagagattattttcccgagctaaacaagtataagtgttgagaaaactaaaccaatctgagattaatgaaatgacaaaacaaaagtagagaatag  6575000          <---------MYB52(1)       <---------ATHB12  ----------->GT1  <---------At4g35610   --------->ANAC58                                <---------GLK1(1) ---------ZAT18         --------->ANAC58                                --------->GLK1(1) ---------ZAT14       --------->MYB52(1)   ----------->RAV1(2)         <---------ARR11(3) ------ANAC58      --------->ANAC58  --------->ANAC58                  --------->ARR11(3) ------ANAC58      --------->ANAC46  --------->ANAC58            --------->YAB1 -------->ZAT18    --------->ANAC58---------->DOF2        --------->At4g35610        <-------TEIL   agtgtgctaatcgttttgttcaagaaacggaaatttcaaaagcaaacctggttccctctcttctgaatcaaaagatttctcaactggtacatgttccttc  6575100                                                                           --------->ZAT2                                                                           --------->At4g35610                                                            --------->ANAC58               <---------                                                       <-----------GT1     <---------ZAT2  <---------DAG2                                                     <---------AHL20(2)   ------->TEIL   ------------                    <---------ARR11(3)        --------->HSFB2a(2)--------->ANAC58        <-----------                <---------ICU4               <---------LBD16--------->ANAC58         --------->ZAT14               <---------YAB1<-----------HVH21<---------HSFB2a(2)--------->ANAC58<---------ICU4     ------>ZmHOX2a(1)     ---------->ID1  --------->ARR11(3)  ---------->DOF2   --------------->AtSPL8  ---------->ID1--------->YAB1          <---------GLK1(2)--------->MYB46(3)<---------At4g35610   tcttgtcctccttgttcatcataatcttcgtcgtcaaacacagaagctctggaatttaaaccactcaaagcaaatgcagctgataagtactctctttttg  6575200         ------>ZmHOX2a(2)                                                               --------->ANAC58       --------->ARR11(3)                                                                --------->ANAC46   <------MYB83                                                                          ============   <------MYB46(1)                                    <---------ICU4              --------->YAB1   --  --------->MYB111(1)                                 --------->ATHB12    --------->ANAC58         <- <--------P                   --------->At4g35610    <---------YAB1       --------->ANAC58      ----- -DOF2 <---------ARR11(3)  ---------->DOF2--------->YAB1                  --------->ANAC46<---------- --->AGL15    ------>ZmHOX2a(1)          <---------ATHB12               --------->ANAC46 --------->TGA1a ----AGL15   --------->TOE2(3)<---------At4g35610    --------->ICU4    <---------REM1(2) --------->ANAC58   gtagtaggtgatcttcctcagtaactacttgaagctcaggcccatcatactcttcatcattgctcccataatctacacgacatatcatcacaagtcagtg  6575300                                                                               --------->TOE2(3)                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                                            <---------GLK1(2)                                                                         --------->YAB1                                                                     <---------ARR14(2)         --------->LBD16                                             --------->ARR14(2)        <---------LBD16                                           <---------ANAC55(2)    ----------->HVH21                                             <---------ANAC46  --------->At4g35610                                             <---------ANAC58 ======bZIP_DOF                                                   --------->ANAC55(2) ------->At4g35610   <---------ZAT6                               <---------ANAC55(1) --------At4g35610 --------->MYB52(2)                        <-----------RAV1(1) ----->DOF2  <------------CBF                         --------->ALFIN1<---------CCA1(2)    <--------- -HVH21<---------LBD16                      <------------AtMYB77  <---------ANAC58   --------->YAB1   aagctgatgaccgggaattggtagtggcaaatagtttcagtttgtaactgctatgggtgggacttgttgcgtatatcaaaatctcaaacataaaaacctt  6575400                                     ------------>CBF                                    ----------->RAV1(1)                                    <---------------AGL15                           <---------AHL20(2)                           <---------AHL20(1)                  <----------CDC5   --------------->AGL15  --------->AHL20(2)       --------->AHL20(2)  <---------AHL20(2)       --------->AHL20(1)        --------->ZAT6         ------------>CBF --------->AHL20(2)   ------------>CBF              <---------YAB1    <------ZmHOX2a(1) <---------ATHB12 --GT1--------->AHL20(2)  <---------ATHB12        <---------ICU4  --------->TOE1(2)    <---------TOE2(3)   ctatttaattaactcaaaacgctgagcaataaattatcccacaataagtagattatgactagagcaaaactaggagaatgcaatacactaatgaagaaac  6575500                                                                                      ------------>CBF                                                                                    ----------->HVH21                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC46                                                                                  ===================                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                  ===================                                                                                  ===================                                                                                  <---------ANAC55(1)                                                                                  --------->bZIP60(1)                                                                                  <---------TGA1a                                                                                  --------->TGA1a                                                                                  <---------O2                                                                                  ----------->GT1                         --------->LBD16                                          <---------bZIP60(1)                       <---------LBD16                                            --------->O2                     --------->TOE1(2)                                         --------->ALFIN1<-----                  <-----------GT1                                           --------->DAG2     <-----               --------->YAB1                       --------->YAB1       ---------->DOF2     <-------   --------->ANAC58  --------->TOE2(2)  <-------GAMYB                    ===================bZIP_DOF   --------->ANAC58 ----------->RAV1(2)<---------MYB46(3)      --------->TOE1(2)  <---------bZIP60(2)   catgtaagaaactgcaaatataacctgcggaagtctcgttgtcgttggactcagacataataaaaccctcgaatgcaaagagtggcgtgacaattttgct  6575600   ---------->DOF2                                        ------->GAMYB ================================bZIP_DOF              --------->MYB52(1)                        ---- ==================bZIP_DOF     <------ZmHOX2a(1)--------->ANAC58                               <---- =============bZIP_DOF       --------->YAB1      --------->ANAC58 ------>MYB83                  ----- ----ANAC58                  <-----------RAV1(2) --------->ANAC46 ------>MYB46(1)              <----- ----ANAC58           ---------->DOF2       --------->ARR14(2)    -------->P                  <------ ----GT1---------->DOF2    --------->GLK1(2)<---------ARR14(2)  --------->TOE1(2)   --------->AtMYB61   tcccaaatagcaaaggaactactgaaaagaatcaggagcaagaacaaatccacgactcaacgaaaacctacaagggaaacataccaccatcaaattttcc  6575700                              --------->ANAC58                          --------->ANAC58 ----->LBD16              --------->ANAC46                        <------ZmHOX2a(1)                -- -----HSFB2a(2)           --------->ANAC58                      --------->ANAC58                ----- ---->HSFB2a(2)      <-------TEIL                     ---------->ID1                           ------ ----LBD16         --------->TOE2(3)       --------->TOE2(3)    --------->ANAC58            --------- -----GT1    --------->YAB1   --------->ANAC58      <-----------RAV1(1)                     <--------   ggtacaattagggaataacaacgttcatacccaagtaccaattttcgtcaaattttgttgtttagtaaggaaccaagaacaaaaccctcgttgatatcta  6575800  Previous    Next  AGI:  At3g19040.1    Description:  HAF2/TAF1/TAF1B (HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY, TBP-ASSOCIATED FACTOR 1B); DNA binding / transcription cofactor. Identical to Transcription initiation factor TFIID subunit 1-B (HAF2) [Arabidopsis Thaliana] (GB:Q6PUA2;GB:Q9LJ62); similar to HAF01 (HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 1), DNA binding [Arabidopsis thaliana] (TAIR:AT1G32750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69722.1); similar to Transcription initiation factor TFIID subunit 1 (TAFII250) (GB:Q67W65); similar to hypothetical protein OsJ_021294 [Oryza sativa (japonica cultivar-group)] (GB:EAZ37811.1); contains InterPro doma Range:  from: 6567163    to: 6575288    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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