Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------DEAR3(2)                                                                                   ----------->GT1                                                                           --------->ANAC58                                                                --------->ARR14(2)<---------DEAR4(1)                       <---------MYB52(1)                       <---------ARR14(2)<---------DREB2C(2)                  ------->TEIL                                 <------ZmHOX2a(1)  <---------DEAR3(1)                  --------->ARR14(2)                        <------ZmHOX2a(1)     <---------At1g77200                  <---------ARR14(2)                      --------->ALFIN1 --------->ANAC58            --------->ARR14(2)   <---------ARR14(2)      --------->ATERF1(1)     --------->DDF1            <---------ARR14(2)   --------->ARR11(3)      <------NtERF2    --------->SPL7          --------->LBD16        --------->ARR14(2)    --------->ALFIN1 <---------MYB52(1)         --------->HSFB2a(2)     <---------GLK1(2)     <---------DEAR3(1) --------->SPL1(2)         <---------HSFB2a(2)<-----------GT1           <---------LBD16   <---------SPL7    ------>ZmHOX2a(2)  --------->ARR14(2)       <---------HSFB2a(2)   <---------------AtSPL3   tattgatccctccagaactgtatccgatattcacagattttgccttgattttggaaggcggaggaggatagaccggtacggatgtcggtgaaaaaaactt  6546100                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                             <---------At4g35610                                    <                                             --------->At4g35610                                    <                                          --------->TGA2(2)                                     <----                      <---------MYB46(3) <-----------HVH21                                      <----                   <---------O2          <-----------TGA1                           <---------ICU4  -                   <---------ZAT2       --------->ANAC55(1)                         --------->YAB1<--                   --------->O2         <---------O2                               --------->ICU4----                   --------->ZAT2       --------->ANAC46                          -------------------            <--------P----------->GT1   --------->TGA1a                       ----------->GT1  ------            ======================================MYC_MYB                   <---------ZAT14    ------          <-----------RAV1(1)           --------->ANAC58                    <-------TEIL       ------          ===================RAV        --------->ANAC58                    --------->ZAT14    ------        <---------ANAC46                ==========================================bZIP_DOF     ------        <---------ANAC58                --------->bZIP60(2)             <---------------AtSPL8 <-----        <---------ANAC58                <---------TGA1a                ---------->DOF2         <-----      <---------DOF5.7(2)               --------->O2                   ==============================    --------->DOF5.7(2)    ----------------------->TaNAC69(2) ------>ZmHOX2a(1)  --------->YAB1------  --------->YAB1 <-----------RAV1(2)<-----------GT1      <---------DEAR3(2) --------->ZAT18    ------   ggaatcgttatcgtgttggccaggtggtttttttttttttacacgtcagcatatttggccggtcctacttatctaaagtacagtaataatgtcatacacg  6546200    <---------ARR14(2)    <---------ZAT14 ------NtERF2 ---------At4g35610 -------HVH21 -------TGA1 -------->At4g35610 -------WRKY12                --------->GLK1(2) ----->TGA2(2)      <---------ANAC46 ---->TaNAC69(2)    <---------ANAC58 --->ANAC58         <---------ANAC58 --->ANAC46     ------>ZmHOX2a(2) --->ANAC58    <------ZmHOX2a(2) --->ANAC55(1)--------->ARR14(2)                                                       <---------GLK1(2) --->O2       <---------AGP1  <---------ARR11(3)                                     --------->AHL20(1) ----TGA1a    <---------ARR14(2)                                                     --------->ARR11(3) ----O2       <---------ARR11(3)             --------->ICU4                          <---------AHL20(1) ====bZIP_DOF --------->ARR11(3)            <---------TOE2(3)                        <---------ARR11(3) --->bZIP60(2)--------->AGP1  --------->ARR11(3)                             ----------->GT1 --->TGA1a <---------WOX13(1) <-----------ARR10 <---------YAB1               <---------ZAT6        --   tcagcgtaaactgatagatcttccttggacaaaatctacttccgataatgttgattcccttctgtctgaattctctctagtgtaaaaaatattctcttga  6546300                                                                                  --------->ARR11(3)                             <---------WOX13(1)                                   <---------ARR11(3)                 --------->ALFIN1                                                 --------->AHL20(1)               <---------ANAC46                                                   <---------AHL20(1)               <---------ANAC55(1)                                                <---------AHL20(2)               <---------ANAC58                                             --------->YAB1     <<<<<<<<<MYB2         --------->ATHB12                                ----------->GT1 <---------  <---------TOE2(2)       --------->ICU4   --------->GLK1(2)            --------->ICU4 --------->YAB1  <---------TOE1(2)<---------ANAC46       <---------GLK1(2)    <---------TOE2(3)  --------->AHL20(2) ------->ATHB12<---------ANAC58  <---------------AGL15         <---------ANAC46  --------->AHL20(2) -   atccttggttttccatagcgtgtgtgtattgatttacaaatatagaatctacagaaaacaagattgagggtgcaaaaatgaaaatatattcagaattgag  6546400                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                      --------->At4g35610                    <-------                                                   ---------->DOF2                           <-------                                          --------->ANAC58      --------->ANAC58      --------->YAB1<                                          --------->ANAC58      --------->ANAC58      --------->AHL20(2)                    <----------DOF2   <---------ARR11(3)       --------->DAG2        <---------AHL20(2)      ----------->GT1                 --------->ARR11(3)      ---------->DOF2     --------->AHL20(2)= ---CBF  <-----------GT1          ------->TEIL    <------ZmHOX2a(1)  *TSS        <---------AHL20(2)-- ----------->CBF  ------>ZmHOX2a(1)  <---------CCA1(2)<---------At4g35610        --------->AHL20(2)<-   ggagcaatttgttacatttcctctttccagtctatgtatatatctcgcaagaggaaagctgaagaaaagcaaaaccctagaaaataaataatattccgtg  6546500      <---------At4g35610      <------NtERF2     ----------->RAV1(1)     ------>NtERF2   --------->At4g35610   <---------LBD16  <---------ATERF1(1) <---------DEAR3(1) ---------->RAV1(2) -------->ATERF1(1) --------RAP2.3(1) -------ANAC58 -------RAP2.6(2) -------PCF2 -------ANAC46                 ------>ZmHOX2a(2) -------ANAC58               <---------AGP1 -------RAP2.3(2)            <---------ARR14(2) ---NtERF2                   --------->ARR14(2) ----->ATERF1(1)             <---------ARR11(3) ----->RAP2.3(1)             <-----------ARR10 -----ATERF1(1)              <---------ARR11(1)                         --------->LBD16 ----DEAR3(1)               <---------CCA1(2)                          <---------ANAC46 --->ALFIN1                --------->LBD16                         <----------DOF2 -->LBD16                <---------LBD16               <---------ARR11(3) --ANAC55(1)            --------->MYB52(1)             --------->ARR14(2)     ======================= --ANAC58        <---------ATHB12            <------MYB46(1)      <---------ANAC58 ->ANAC55(2)     ----------->TGA1            <------MYB83         <---------ANAC58 --ANAC55(2)<---------ARR11(3)<---------GLK1(1)        <---------GLK1(2)------>NtERF2           <---- --ANAC58  --------->GLK1(1)<---------ARR14(1)         --------->ARR11(3)     <------ZmHOX2a(1) ----- --ANAC46<------NtERF2<---------ARR14(2)    --------->MYB59     <---------ANAC46           <---------ARR14(2) ------NtERF2<------ZmHOX2a(2)--------->GLK1(1)        <---------ARR14(2) <---------ANAC46 --------->ARR14(2) ================RAV<---------YAB1          <---------AtMYB61 <-----------HVH21  --------->At4g35610- ---->NtERF2--------->ARR11(3)<------ZmHOX2a(2)      ----------->ARR10<---------LBD16 ------------>MYB.PH3(1) --------ATERF1(1)--------->YAB1        --------->ATHB12     <-----------RAV1(1)--------->GLK1(2)<---   gcgcctgcggcagagatcaatgacgataccggatctctgtaacgatttggtcgatgagatactctgtcgcgttccggcgaggaatctgaaacggttacga  6546600                                                         <-------MYC2                                                         ------->MYC2                                                         ------->MYC3                                                         <-------PIF5                                                         ------->PIF5                                                     <---------ZAT18                                            --------->ANAC58                                           <-------TEIL  <-------PIF4                                          --------->ARR14(1)       --------->MYB52(1)                <---------GLK1(2)     --------->MYB46(3)                  --------->ARR14(2)     <---------MYB52(2)                  <---------ARR14(2)                        -------->P    --------->At4g35610                  --------->ARR11(1)     --------->DAG2     ------->TEIL   --------->ANAC46                     <---------HSFB2a(1)    ---------->DOF2    <-----------GT1   --------->ANAC58             <---------YAB1       --------->ZAT18           --------->ARR11(3)   --------->ANAC58           --------->YAB1--------->ANAC58--------->YAB1     --------->ARR14(2) ===HOX2a_HOX2a            ---------->DOF2--------->CCA1(2)<-------TEIL        <-----------ARR10 -----ARR11(3)      <---------MYB52(1)  <---------GLK1(1)<-------MYC4          <---------ARR14(2) ---->ARR11(3)    ----------->GT1      ----------->ARR10 ------->PIF4          --------->GLK1(2) ------->P     --------->ARR14(2)     <------ZmHOX2a(1)  <-------MYC3          <---------ARR11(3)  -- ---ZmHOX2a(2) <---------ARR14(2)--------->ATHB12    <---------ZAT14   ---------->DOF2             --   tctaccagcaaacgatggaaccgtttattcaaagatgataggagattcgcaagagagcacatgcataaagccccaaaggagtatctacctctcatgttga  6546700                    <---------MYB52(1)                   <---------At4g35610                                                  --------->LBD16                   --------->At4g35610                                                ------>ZmHOX2a(2)                   --------->LBD16                                                    <---------LBD16              ----------->HVH21                                                      --------->ARR14(1)             ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)            <------ZmHOX2a(2)                                                        --------->CCA1(2)           --------->ARR11(3)                                                       <---------ARR14(2)           <---------ARR11(3)                                                       --------->AGP1           --------->GLK1(2)                                                        <---------GLK1(2)           <---------ARR14(2)                                                       --------->ARR11(3)           --------->ARR14(2)                                                       <---------ARR11(3)           <-----------ARR10                                                        --------->ARR14(2)           <---------AGP1                                ----------->GT1       --------->MYB52(1)          <---------GLK1(2)                              <---------ZAT6        ------>MYB46(1)          <------ZmHOX2a(1)                          --------->ZAT14           ------>MYB83      <---------ZAT14        --------->WOX13(1)      <---------ZAT14  --------->At4g35610   --------- ------->ANAC58  <---------LBD16          --------->ARR11(3)          <---------At4g35610  <---------KAN4(2) ------->ANAC58<-----------HVH21          <---------ARR11(3) ---------->DOF2   -------->P <---------GLK1(2)   caagcgagtacaggatctgtccggtgagcatcaatctccaaggagatgttccttctgtagtgttaaagagagagcttagcctaccagatccggattattc  6546800                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              ------->TEIL                                                                           <---------ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC55(2)                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                 --------->ARR14(2)                                                                 --------->GLK1(2)                                                                <---------GLK1(2)                                              --------->ANAC58--------->ANAC58<---------AGP1                                      --------->ATHB12    --------->ANAC58 --------->ANAC58                                  ------>NtERF2           --------->ANAC58 --------->ANAC55(1)                                 <---------DEAR3(1)   --------->ANAC46--------->LBD16                                --------->ATERF1(1)   <---------O2    --------->ANAC46                               <---------ATERF1(1)    --------->O2  <---------LBD16                              ----------->HVH21    --------->MYB46(3)--------->LBD16                          <---------At5g28300 --------->ANAC58--------->ANAC58--------->ARR14(2) >KAN4(1)             <----------DOF2<----------DOF2------->GAMYB<---------ARR14(2)         <--------   acatcaattcgatataggtcgagtctttcactgcgacggcttattggtatgcaaccacgtaggcaagaatccccgatacggatctaaaatcgtggtttgg  6546900                                  <------NtERF2                                 --------->LBD16                                <---------RAP2.6(2)                                --------->ATERF1(2)            <---------WRKY38(1) --------->RAP2.6(2)           --------->WRKY18(1)  <---------ATERF1(2)          <-----------HVH21    --------->ATERF1(1)                                   --------->ANAC58     ------>NtERF2             --------->RAP2.6(3)                        <---------ARR14(2)    --------->WRKY38(1)       <---------ATERF1(1)                         --------->ARR14(2)    --------->WRKY12          --------->ZAT2                              <---------GLK1(2)    ----------->HVH21     ------>ZmHOX2a(2)                           --------->HSFB2a(2)   <----------CDC5 --------->ZAT2------>NtERF2                        <---------HSFB2a(2)  --------->LBD16<-----------RAV1(2)                                  <---------LBD16--------->ANAC58  --------->At4g35610 <---------MYB46(3)                      <---------GLK1(2)<---------At4g35610  <---------At4g35610--------->ALFIN1                         --------->ARR14(2)     --------->ANAC46 -ANAC46 ----------->GT1<---------ARR14(2)                    <---------ARR14(2)  -------->P   aacccgctgactggtcaaaccaggtggatcgaagccggctatcgttggaaggaatacgaagtcagatttgttctcggatactgctaccagcaagacgaga  6547000  Previous    Next  AGI:  At3g18980.1    Description:  F-box family protein. Identical to F-box protein At3g18980 [Arabidopsis Thaliana] (GB:Q9LJ68;GB:Q8LB99); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G18910.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 6546469    to: 6548068    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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