Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------YAB1                                                --------->GLK1(2)                                         --------->ANAC58                                  <---------DEAR3(1)                                         --------->AtLEC2                                 --------->At4g35610               <---------AHL20(2)        --------->ANAC58                                 <---------At4g35610              --------->AHL20(2)         --------->ANAC46                               <-----------RAV1(2)              <---------AHL20(2)        ------->MYC3                                  <-----------HVH21          <---------AHL20(2)            <-------MYC2                                --------->ZAT2          <---------YAB1                <-------MYC3                                <---------At4g35610        --------->YAB1      <---------AHL20(2) --------->ARR14(2)               <---------ALFIN1      <---------MYB52(1)    --------->AHL20(2) <---------ARR11(3)              <------NtERF2 <------NtERF2 --------->DEAR3(1)        <---------ATHB12    <---------GLK1(2)              --------->RAP2.6(2) --------At4g35610 --------->AHL20(2)   ------->MYC2                        --------->RAP2.6(3) <---- ------->At4g35610 <---------AHL20(2)<---------ALFIN1           <---------GLK1(2)   --------->At4g35610 ----->DOF2--------->YAB1  --------->AHL20(2)  <---------ARR14(2)        ---------->DOF2---------->CDC5   gagcagccgtttataattaaataaaatcaataaatgactccacatgcaagattctcatttgagacagaaactctccaaagcggcacagcttcagcggcga  6540900                                       ------->GAMYB                                    --------->MYB52(1)                                 --------->ANAC46                ------->GAMYB             ------->GAMYB         ---------->DOF2         --------->YAB1               --------->MYB52(1)        --------->MYB52(1) -----ARR14(2)            <----------ID1                   --------->ANAC46          --------->ANAC46   tttggagacccaaaagctaagtggcattgggccaaacacaaccgaagcctatttgttcaaaacacaaccgaagcctatttgttcaaaacacaaccgaagc  6541000                                                                                               ------                                                                                            ------>ZmHOX2a(1)                                                                                           ----------                                                                        ---------->DOF2    --------->TOE2(3)                                             ------>MYB46(1)          XXXXXXXXXXXXXXXXXXXX>MIR829.2                                             ------>MYB83           ---------->DOF2        <---------                 ------->GAMYB             ------->GAMYB       --------->TOE2(3)      <---------HSFC1(2)              --------->MYB52(1)        --------->MYB52(1)     ----------->GT1        --------->HSFC1(2)           --------->ANAC46          --------->ANAC46         ----------->GT1     --------->ANAC46<--   ctatttgttcaaaacacaaccgaagcctatttgttcaaaacacaaccgaacaaaaaaaactaaaatgttaaaaagaaagcttcaaggcaacttcctcaaa  6541100                                  --------->At4g35610                             <---------ARR11(3)                             --------->ARR11(3)  ---------->DOF2        ---------->DOF2                                ---------->DOF2  ------->TEIL ---->DOF2            --------->LBD16                              <---------REM1(1)------>MYB46(1) ----->AGL15     --------->ARR14(2)                                <---------ANAC46 ------>MYB83 ------AGL15     <---------ARR14(2)                         --------->YAB1        <---------MYB59 --------ID1    <----------TaMYB80<---------At4g35610      <---------YAB1  --------->At4g35610 ------   aggagaaagcttcaaggcaaattccccaaaagatttagctgactatcaggtttgaatgtttataatatgatgtagaaagctcaacctaatgcatctagca  6541200                                                --------->YAB1                                             <---------ICU4            <---------ANAC55(2)          --------->ICU4       --------->bZIP60(1)           ----------->GT1       <---------bZIP60(1)   ---------->DOF2 --------->YAB1     <------ZmHOX2a(1)   --------->TOE2(3)  --------->ICU4                                          -  <---------ICU4         --------->TOE1(3)--------->YAB1                                     -------- --->YAB1   --------->ANAC55(2)   --------->CCA1(2)  --------->AHL20(2)                 <-------TEIL-   taaataaggacatcacttaatccaaaaccttcaaagagatggaataataatcaaaataaaaacttataagcctaaacaaatattcgaaaattcattttaa  6541300                       <---------ANAC58                       <---------ANAC58                  <---------RVE1(1)                  <---------CCA1(1)                <------ZmHOX2a(1)              <---------TOE1(2)       <---------HSFB2a(1)                                         <---------ATHB12       --------->HSFC1(2)                                          --------->ICU4       --------->HSFB2a(1)                                    --------->ANAC58       <---------HSFC1(2)  <---------AtLEC2                   --------->ANAC58    *TSS      <---------TOE2(2)                             <---------ANAC58        <-----------GT1 -------->TOE1(2)<---------ARR11(3)                         <---------ANAC58     <<<<<<<<<ARR2 ->AHL20(2)   <---------TOE2(3)                             <---------ANAC46     <<<<<<<<<ARR1 -------->TOE2(2)--------->ARR11(3)              --------->HSFB2a(2)<---------ICU4--------->YAB1   --   aacatgggaaccttcttaggatattttgtgcctggtctctcacttgcacttctcggtctctggcatgtaatcaataccatacaatcttactctctaaatt  6541400                                                                                     <---------ICU4                                                                                  --------->ATHB12                                                                                  --------->YAB1                                                                                  <---------ICU4                                                                                 <---------YAB1                      <---------GLK1(2)                                        <---------ICU4                    --------->ICU4                                            --------->ICU4                    <---------YAB1      --------->LBD16                    <---------YAB1               --------->ANAC46        <---------ANAC46                   <-----------TGA1 <---------             <-----------GT1          <---------LBD16              <---------At4g35610  <-----------GT1 ------->LBD16 <---------At4g35610<----------DOF2           --------->ARR11(3)<---------YAB1   ccccaaaccaaaatttcacctcatgattctggttccctttcccgtataacaaaaaactcaaacatctcgagctcatcgtcattatcattgttactttctt  6541500                                  --------->AHL20(2)                                ------>ZmHOX2a(1)                               --------->TOE1(3)                       <-----------GT1                     --------->GLK1(1)                                                            <--                     <---------GLK1(1)                   --------->GLK1(1)                        <--                    <---------GLK1(2)<---------AHL20(2)  <---------GLK1(1)                        <--                    --------->ARR14(2)                --------->LBD16                       <--------           ------>ZmHOX2a(1)   --------->TOE2(3)    <---------LBD16 --------->At4g35610     <-------- -DOF2  ------>ZmHOX2a(1)  <----------DOF2   <----------DOF2        <---------At4g35610     <--------   atccattttcctcctaaactcagatttccctttccttaaattatcgtctttcaaaccggaaatcaaacacatctgcatagtcttccaactcatttcgttt  6541600                                 <-----------------AGL1                          <---------ICU4                    --------->ANAC55(2)                    <---------ANAC55(2)                    ----------->GT1       <------ZmHOX2a(1)     <---------ALFIN1     <---------AHL20(2)    <-----------GT1                 <<<<<<<<<MYB2 -------ANAC58      --------->bZIP60(1)  ----------->GT1                  --------->ATHB12 -------ANAC46      --------->ANAC46    <---------TOE2(3)               ----------->RAV1(1) -------ANAC58     ---------->ID1<-----------------AG                --------->AtLEC2 -ANAC46           <---------TOE2(3)    <---------TOE1(3)            --------->ANAC58 --------->AtLEC2 -ANAC58         ----------->HVH21 --------->LBD16                   --------->ANAC46 --------->ANAC58 -ANAC58       <----------DOF2  ------>ZmHOX2a(1)--------->MYB52(1)  --------->ANAC58 --------->ANAC58   gcgtcttccactctcatctttgacgtaataaatcctcccgataaggatatataccggtttcatcgggcttcatgcaacattggttttcatgcaagaagta  6541700                                --------->MYB59                         ------>NtERF2                   --------->ZAT14                                   <---------At4g35610                 --------->ANAC58                                    --------->At4g35610                 --------->ANAC58                                <---------ARR14(2)                 <                 --------->ANAC46                                --------->ARR14(2)                 <          <---------GLK1(2)   <---------MYB52(1)             <---------HSFB2a(2)                    <      <---------ANAC58  --------->YAB1                       --------->HSFB2a(2)             <-------      <---------ANAC58 <---------ATHB12                      ------>ZmHOX2a(1)      ------>ZmHOX2a(1)   <----------DOF2 <---------ZAT14--------->ARR11(3)      ------>ZmHOX2a(1)    ---------->ID1--------   ctcttctttcttgattctcactccactgatcacttaggtcttgaaggccagtaccatgtcctcctcgaattcgctgccttcgtctccttctcttcagctc  6541800  Previous    Next  AGI:  At3g18955.1    Description:  pseudogene, hypothetical protein Range:  from: 6541304    to: 6542234    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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