Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                              --------->TGA1a   -----                                                                              --------->O2      -----                                                                    <---------ANAC58            -----                                                                    <---------ANAC46            -----                                                                    --------->ANAC55(2)         -----                                                                    <---------ANAC58            -----                                                                    <---------ANAC55(2)         -----                                                                 <---------MYB52(1)             -----                                                               --------->ANAC55(2)             ------                                                               <---------ANAC58<-------MYC3    ------                                                               <---------ANAC58------->MYC3    ------                                                            <---------MYB52(1)<---------TGA1a <------                         --------->YAB1                  <---------TOE1(3)    <---------ANAC46-------                --------->TOE2(2)                   <---------ZAT6  <---------ANAC55(1)       <------       ----------->GT1   --------->AHL20(2)     <---------ZAT14<---------ANAC55(2)   --------->ICU4-- --------->YAB1 --------->TOE2(3)  <---------ARR14(2)    <---------YAB1       <---------O2    ------- ---------ATHB12--------->TOE1(2)  --------->ARR14(2)    <---------TOE2(3)    =======================   taatcaaaacagaaaaaacctaagtaataaaaatcaagttccgcttggagaatagtgttatcgttacgttacgttttgcaacgtgtgaagatgatcagcc  6536300  <---------ALFIN1 ---------->RAV1(1) ----->NtERF2                                                               --------->ANAC58 ----NtERF2                                                              <---------SPL7 ------RAP2.6(3)                                                        --------->ANAC58 -->NtERF2                                                              --------->DEAR3(2) ------ATERF1(1)                                                        --------->ANAC58 -----ATERF1(2)                                                        --------->SPL1(2) ---->RRTF1(2)                                                         --------->SPL7 ---->DEAR3(1)                                                        --------->SPL1(1) ---->RAP2.6(2)                                                       <---------SPL1(1) ---->DREB2C(2)                                                 --------->HSFC1(2) ---->RAP2.3(3)                                                 --------->HSFB2a(1) ---->RAP2.3(2)                                                 <---------HSFC1(2) ---->RRTF1(3)                                                  <---------HSFB2a(1) ---->ATERF1(2)                                                ------->TEIL --------->ANAC58 -------- -->GAMYB                                                      <-----------ARR10             -------- ---->ANAC46          --------->YAB1                           --------->GLK1(2)             -------- --->RAP2.3(1)      --------->ARR11(3)              --------->YAB1<------------------SPL14   <------- --->ERF1 <---------ALFIN1                      <---------HSFB2a(2)  <---------SPL7          <------- --->MYB46(3)   <<<<<<<<CAMTA3             ------>MYB46(1)     <---------ARR11(1)            <------- ---ATERF1(1) --------->ANAC46             ------>MYB83        <---------ARR14(2)            -------- -->At4g35610 --------->ANAC58           ------->GAMYB         --------->ARR14(2)           <-------- ---At4g35610 --------->ANAC58          --------->MYB46(3)    <---------ARR14(1)    <---------TOE1(2) ------->DEAR3(1)   <---------ARR11(3)  <---------MYB55(2)    <---------GLK1(2) <---------At4g35610<- -->ZAT2----------->RAV1(1)            --------->ANAC46       <---------CCA1(2)------->TEIL --------- ===MYC_MYB <---------ALFIN1    <---------YAB1  --------->HSFB2a(2)<---------------AtSPL3   <--------   gccaacacagccacacacgcgttatcttgattttcttattcaaccaacttctaaaaataaacccgaatcttcgtacggacgcatctcatgttcaattatt  6536400 ->YAB1 >ATHB1 ->AHL20(2) --AHL20(2)                                                      --------->MYB46(3) --ICU4                                                          --------->ETT(2) -HAHB4                                                          <---------ETT(2) ->ATHB51                                                        ----------->HVH21 -ATHB51                  <-----------GT1                       --------->SPL7 ----------GT1    ------->TEIL                                <---------SPL7                     ---- >ICU4           <---------AtLEC2                        <----------DOF2           --------------->AGL15 -ATHB12       --------->AtLEC2     <----------DOF2  <----------DOF2    --------->SPL7<----------DOF2   ttcacattgctctaaccatgcatgtaatttactcaaggctttgttttgagaccgtctttcttttcggacgaccgtccatccattactccttttagtcttt  6536500                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                  ---                                                                                                 ----                                           <-----------GT1   <---------YAB1                     -----                                      --------->ICU4 --------->ZAT6                             <----                                     --------->TOE2(3)--------->YAB1                           <-----                                  <-----------GT1 <---------ICU4  --------->ATHB12             <-----      <----------DOF2          <---------ICU4     <---------AHL20(2)                           ------   <---------ALFIN1           <---------AHL20(2)  --------->AHL20(2)        <-----------HVH21 <------ ----->YAB1                   --------->AHL20(2) --------->AHL20(2) <---------WOX13(1)     <---------   catcaacactttcttatttccaaagttgcatattaattacattattaactaattaatactaatattcttgattaacacggtctcatgtgaaaactggcgc  6536600                                           --------->WOX13(1)                                        <-----------HVH21        --------->MYB52(1)            <-------MYC3       ----------->HVH21              ------->MYC3     <---------At4g35610              ------->MYC4     --------->At4g35610              <-------MYC4    <---------ARR14(2)                ------->MYC2    --------->GLK1(2)                 <-------MYC2    --------->ARR14(2)                <-------PIF5            --------->WRKY38(1)   --------->ARR14(2)                 ------->PIF5           <---------MYB52(1)   <---------ARR14(2)                <---------ANAC55(2)   <---------DEAR3(2)   <---------GLK1(2)                 <<<<<<<<<<AtMYC2      <---------MYB46(3)  <------NtERF2                      <---------O2         <---------TOE1(2) --------->LBD16                     --------->ANAC55(2)  --------->SPL7 <---------RAP2.6(3)                 <<<<<<<<<<HY5   <-----------HVH21 -------->HSFB2a(2)                  --------->TGA1a--------->bZIP60(2) -------->RAP2.6(2)                  <--------ABF1  --------->TGA1a -------->LBD16                      ============================================bZIP_DOF --------LBD16                       =========================bZIP_bZIP --->NtERF2     <---------O2         <<<<<<<<<<ABI5 <---------TGA1a ----->DEAR3(1) <---------TGA1a      <---------TGA1a<---------O2 ---->ATERF1(1) <---------ANAC55(2)  --------->O2   =============================bZIP_DOF --NtERF2       --------->ANAC58     --------->bZIP60(2)<---------SPL7       <-----------GT1 ----At4g35610  --------->TGA1a     ------>NtERF2   --------->O2           <-----------GT1 ----ATERF1(1)  --------->O2    --------->ANAC58  <---------ALFIN1    <---------DAG2 --->At4g35610  --------->ANAC55(2)<---------ALFIN1 --------->ANAC46  <----------DOF2 ---DEAR3(1)    --------->ANAC58--------->ANAC46 --------->DEAR3(1) ------>MYB83  ----------->TBP <-- --RAV1(1)  <-----------HVH21   --------->ANAC58 --------->MYB46(3) ------>MYB46(1)   <-----------GT1   tgccggaatctgacggtcacgtcttcagtctaaaacgccacgtgtcattcacccacgtcgtccgttcaccaactttttttctctatatatacaaatccaa  6536700                                               --------->AHL20(2)                                            <---------ANAC55(2)             <---------AHL20(2)                                           <-------TEIL                    <---------AHL20(2)                                        ------>MYB46(1)                    --------->AHL20(2)                                        ------>MYB83                       --------->AHL20(1)              <----------DOF2         --------------->AGL15                <---------AHL20(1)         <---------ALFIN1             <---------MYB59                --------->ANAC46        <---------ZAT14              ----------------->AG            --------->ANAC58               -        --------->ZAT14            <-----------GT1             --------->ARR14(2)        <---------ANAC58  ------>ZmHOX2a(1)  *TSS        <---------ANAC58              <---------ARR14(2)        <---------ANAC58 -------ARR11(3)  <-----------GT1<---------ANAC58    <-----------GT1 --------->ANAC58  <-----------ARR10   catcctcttctacactctttatacatttcaatatttcttaccaaatacataaatttttctctccaaatcccaagaaataaaatttcgaatttcttccctc  6536800                 --------->ANAC58                 --------->ANAC58             <-----------HVH21            --------->O2            --------->ANAC58            --------->ANAC55(1)            <---------TGA1a            --------->bZIP60(2)            --------->ANAC46            --------->ANAC58            <---------O2            --------->TGA1a          <---------ALFIN1                                    <---------MYB111(1)         <---------REM1(2)                                    --------->MYB46(3)               ------        <---------ALFIN1                              <---------HSFB2a(1)            <---------ZAT6   <-----------ARR10                                <-----------GT1                  <---------ANAC46   --------->ARR11(3)                    <---------ANAC58------>MYB83              <---------ANAC46   <---------ARR11(3)                    <---------ANAC58------>MYB46(1)         <---------ZAT14  --------->CCA1(1)                --------->AHL20(2) --------->HSFB2a(1)        --------->ZAT14  --------->RVE1(1)        <-----------GT1        --------->AHL20(2)    <---------AHL20(2) --------->ARR11(3) -------->AHL20(2)      --------->AHL20(2)       <---------ATHB12    ----------->GT1 ----------->GT1<   aaaaaaatctccacacgtcaaggaaattaaaaccccataaattccttgccaataaaaccttccaactactcaagttaattttctgtagtgtataatcttg  6536900                                                                                      ------>NtERF2                                                                                     ----------->HVH21                                                                                     --------->WRKY12                                                                                     ----------->TGA1                                                                                   ------>NtERF2                                                                                   --------->At4g35610                                                                                   <---------ATERF1(1)                                                                                   <---------At4g35610                                                                                  --------->DEAR3(1)                                                                                  --------->RAP2.3(2)                                                                                 --------->RAP2.3(1)                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                                --------->LBD16                                   <---------ICU4                             <---------LBD16                                   --------->YAB1             =====================HOX2a_HOX2a                       ----------->RAV1(1)          <----------DOF2        <---------ARR14(2)    ----------->GT1    --------->MYB52(1)   --------->ARR14(2)------>ZmHOX2a(1)--------->ANAC46 ----->GT1            --------->AtMYB61   --------->LBD16  ------>NtERF2   --------->ARR14(2) ---------ARR14(2)   --------->MYB46(3) <---------LBD16   --------->DEAR3(1)<------ZmHOX2a(2)>>>>>>>>   aaaatatggtaatagctacagaaaccaccagtagtagtcatcaccggagactcactttcgcctccttcttaaactccgatcccgccgctgacgaagaaga  6537000                                                                            <---------ETT(1)                                                                          <---------At5g28300                                                                          --------->MYB52(1)                                                                         <-----------GT1                              --------------->AGL15                      <<<<<<<<<GT-2                              <---------------AGL15                   <---------ICU4                       <---------YAB1                                 --------->ATHB51                      --------->TOE2(3)                               <--------HAHB4                     --------->YAB1                                  --------->ICU4     --------->ANAC58                  --------->bZIP60(1)   ----------->RAV1(1)          <---------YAB1     --------->ANAC58                  <---------bZIP60(1)  <----------ID1           --------->WOX13(1)      --------->ANAC46               <---------YAB1----------------->AGL2         --------->GLK1(1)   ---------->DOF2    -- >TBF1   <---------ANAC46--------->WOX13(1)      --------->TOE2(3) --------->YAB1     ---------->DOF2   acagagtcatggtgttgatgatatcatcaatcccagtagtagcaacaaaaacatcaacaaggatgtccatcataattaccgacaaagtcaaagcaatgct  6537100                                                                          --------->ANAC46                                                                        ----------->RAV1(1)                                                                       --------->DREB2C(2)                                                                       --------->DEAR4(1)                                                              <---------SPL7    ------->GAMYB                                                            --------------->AtSPL3   --------->ANAC58                                                            --------------->AtSPL8   --------->ANAC58                                                       ------>MYB46(1) <---------ETT(1)                                                       -------->P      --------->DEAR3(1)                                                       ------>MYB83    --------->At1g77200                                                     <---------MYB59  --------->DEAR3(2)          --------->At5g28300                     ------>MYB46(1)  <---------ZAT14   --------->ANAC46          <-----------HVH21                     <---------MYB59 --------->SPL7 <---------MYB52(2)      --------->MYB52(1)       <---------ARR11(3) ------>MYB83--------->LBD16  --------->MYB46(3)    <---------MYB52(2)    <---------ATHB12      --------->AtMYB61  --------->ZAT14 <---------ALFIN1 ------->HSFB2a(2)     ------>ZmHOX2a(1)  --------->AtLEC2------------------>SPL14 --------->ZAT6   tcgacaactagcggtgagtcgtctcctaatcaagttctatcgccatggaaccaaacctactctccgtactacaccgacacaacaaacactccatcgatgt  6537200  Previous    Next  AGI:  At3g18950.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G49450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47693.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 6536721    to: 6538664    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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