Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ----------->GT1    <---------ANAC46   <------NtERF2   --------->ALFIN1  --------->MYB55(2)  <---------MYB46(3) <---------ANAC46 --------->ALFIN1 -----MYB83 --------ZAT2 -----MYB46(1)                            <-----------GT1 -------MYB46(3)                       <---------ICU4 ------>MYB55(2)                     --------->ARR11(3) ------ANAC58                        <---------ARR11(3)                                           --- ------ANAC46                   --------->YAB1                                            --------->TOE2(3) ------ANAC58                --------->WOX13(1)                   --------->TOE2(3)--------->TOE2(3) >NtERF2         --------->YAB1<---------ATHB12           <---------YAB1           --------->TOE1(3)   ctggtggggggaaacaaaatcaaaacttcatcaatcataaatctttacaacatttgttttatgagaaacatcaaatgctactaaaccctaaacctttttc  6528800                                                      <----------DOF2                                                     <---------HSFB2a(1)                                                     --------->HSFB2a(1)                                                  <---------ZAT18                                               --------->ALFIN1                   <---------LBD16            --------->ALFIN1                    <---------TOE2(3)                  <---------ANAC58         --------->DAG2                         <---------------AtSPL8         <---------YAB1  --------->GLK1(1)---------->DOF2                         <---------------AtSPL3       --------->YAB1<---------TOE1(2) --------->ANAC58                         ---------->DOF2      <-------TEIL<---------ANAC46     --------->ANAC58              <-----------GT1  <-------TEIL <- --->ZmHOX2a(1)   <---------ANAC58  ----------------->AGL3    <-----------GT1  <---------ATHB12 <----   ctacaagtttcatgactgtttcgtgggatttcaatgttcccaagaaaagttggggactttctaatttctattttctcttcaataaaggtacagtttttaa  6528900                                                                             --------->ANAC58                                       --------->At4g35610                   --------->ANAC58        ----------->GT1             ---------->DOF2               --------->ANAC58                  -       --------->ANAC58      --------->ARR14(2)                   --------->ANAC58           <-------       --------->ANAC58      <---------ARR14(2)                  --------->DAG2              -------- ---------DOF2       <---------------AtSPL8        <------ZmHOX2a(2) ---------->DOF2    <---------MYB52(2) -----TOE1(3)     ---------->DOF2 <---------HSFB2a(2)           ---------->DOF2      --------->MYB46(3)   gctttagagacggaaatatcgaaagggaacgaatacccagaagcagagaacagatcgaaatcggagaaaagcaaaggaaacgaaacaacaacttacgaga  6529000       --------->ANAC58                                 <---------YAB1                      <--------       --------->ANAC58                 --------->MYB46(3)                      --------->GLK1(2) --------->DOF2           <---------ANAC58  ------->GAMYB                       --------->ARR14(2) --HSFB2a(2)              <---------ANAC58 --------->MYB46(3)                  <---------GLK1(2) ->HSFB2a(2) --------->YAB1<----------DOF2 <---------MYB52(2)            ----------->HVH21  ---------   actaaagtcgagcaatcttcattcactagctttccttcttcaacaacaaactccatttatgaaggcaaaacactggtgacagaatcggattgcaagtttc  6529100                            <---------ANAC58           *TSS                            <---------ANAC58       <---------AtMYB61                                -                 <-----------ARR10               <----------DOF2                                  <--   --------->ARR11(3)  ------>NtERF2        <<<<<<<<<TBF1             --------->ANAC58            --- -HSFC1(2)       --------->GLK1(2)      <---------ARR14(2)            --------->ANAC58      <-------- >HSFC1(2)      <---------GLK1(2)       --------->ARR14(2)          ---------->DOF2        <---------RAP2.6(3)   ccaaatatcaagttcgaagaatctctgcctgcgttcagaacagttcttcttctttggtcgagcttgaagagaaagccagtgactaatttgggccgatatt  6529200                                      <----------ID1                                     <---------TOE2(3)                                     ----------->GT1                                   ---------->DOF2                                  <---------ATHB12<---------WOX13(1)                               <---------------AGL15       ----------->GT1        ----------------->AGL1   --------->YAB1             <---------------AGL15  <---------ATHB12            <-----------------AGL1              <---------ANAC46 -------->WOX13(1)            --------------->AGL15               ----------->GT1 -------YAB1                  ----------------->AGL2          --------->ZAT14    ----------->HVH21 --------->CBF                ------------>CBF <---------YAB1 <---------ZAT14    ----------->TGA1 -ARR14(2)               ---------->DOF2  ---------->DOF2--------->REM1(1)<---------AHL20(2)   atcaatcaaatgtaatatgggccatattaaagcccaataaaggaaaaagatgatggactacaactgtagagtatatatacttggtgacgattttgtccaa  6529300              ----------->GT1                                          <---------------AtSPL3            <---------ANAC46                                           --------------->AtSPL8         ----------->HVH21                                             <---------------AtSPL8         ----------->TGA1         ---------->DOF2          <---------ANAC46      --------->DAG2  ---------->DOF2                    <---------ANAC46          <---------YAB1   -    ---------->DOF2  --------->AHL20(2)                  ----------->GT1   --------->SPL7       -----   aaaaaaaaaaggtgacgagaaaataaaagaagaaatgaaagtctataatctactacatgcggtgtaaatgtagttagtacgacttatgctaacattctac  6529400        --------->DAG2                                           ---------->DOF2       ---------->DOF2                                       <----------ID1    --------->AHL20(2)    <---------ARR11(3)               <---------------AtSPL8                 <--  ------>MYB46(1)         --------->ARR14(2)              --------->DAG2                          ---  ------>MYB83            <---------ARR14(2) <---------------AGL15                    ---------->DOF2 ------>GAMYB     ------->TEIL               --------------->AGL15             <---------TOE2(3)  <-- ---->REM1(1)    <---------CCA1(2)       --------->ZAT18 ---------->DOF2 --------->AHL20(2)--------->CCA1(2)   aaccaaataaaaagttgatgtatctcagtatctactattgaagtgaaccatttgagggaaaaaggaacaaagcatatatataagattggaaagagatgag  6529500                                                                  <-----------HVH21                                                               <---------WOX13(1)      <---------DEAR3(2)                                  <---------ANAC55(2)      ----------->GT1                         <---------AHL20(2) <------MYB83     <---------ATERF1(2)          <------MYB83--------->AHL20(2) <------MYB46(1)    --------->AHL20(2)     <---------MYB46(3)         <---------MYB52(1) --------->AHL20(2)            <----------DOF2     --------->ATERF1(2)       <-------GAMYB<----------DOF2  --------->ATHB12   <---------DAG2 -------ZAT2                  <-----------RAV1(1)  <---------AHL20(2)     <---------------AtSPL8 ------>ZAT2         --------->TOE2(3)  <---------GLK1(2) --------->ANAC55(2) ------->TEIL -------ZAT14      <-----------GT1<------MYB46(1) <---------AHL20(2)      --------------->AtSPL8   agcagggccggtacaatgttttttcttaatttctgttggtcatattctttaatttatatcaagtgattggtcatatcaagtaccttttaaataagtagaa  6529600                                                        ------>MYB83                                -                                                        ------>MYB46(1)                             <                                                    ------->TEIL                                    <                                                --------->DAG2                                      <                    <----------DOF2             <---------------AtSPL8                              -              --------->ANAC58                 ---------->DOF2                                      <              --------->ANAC58            <---------------AGL15                                     <             --------->WOX13(1)           --------------->AGL15                    <---------TOE2(3)-     <-----------HVH21 --------->ZAT6    ----------------->AGL3              <---------YAB1    <-----    <------MYB83 ------->TEIL            <-----------------AGL3    <-------GAMYB  ---------->DOF2 <--    <------MYB46(1)<---------DAG2        ============================================================   gaaggctggtcatatcaagcacctttcactagggatagttctatctaaaaaaagtacctacagaaatggggttatagttttgattaaagaagcactagta  6529700  Previous    Next  AGI:  At3g18940.1    Description:  clast3-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN60895.1); contains InterPro domain Uncharacterised conserved protein UCP010044 (InterPro:IPR016562) Range:  from: 6526964    to: 6529155    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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