Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------AHL20(2)                ------>ZmHOX2a(1)        ===============HOX2a_HOX2a        ------>ZmHOX2a(2)       ================HOX2a_HOX2a       <------ZmHOX2a(2)                                                                       <-----       --------->CCA1(2)                                           ------->MYC3      <---------AHL20(2)      --------->AGP1--------->AHL20(2)                             <-------MYC3     --------->AHL20(2)      <---------ARR11(3)                                     ------>ZmHOX2a(1)      --------->YAB1      --------->ARR11(3)                                --------->RVE1(1)        --------->YAB1------ ->ALFIN1      --------->TOE2(3)                      --------->AHL20(2)        <---------AHL20(2) --   gaaattgagatctaaatcctaaaaaaatgttgatgtcaaacaaacaaacaaacaaaaaaaatcctaacacatgtattggtttttaataaaaatgtcattt  6516800                 ----------->GT1                 <---------ANAC46                 <------MYB46(1)                 --------->At4g35610                 <------MYB83                 <---------ANAC55(2)                --------->MYB111(2)                --------->MYB46(2)                --------->MYB52(2)                 <---------AHL20(1)                --------->MYB111(1)                --------->AHL20(1)           <---------ARR11(3)                      <---------AHL20(2)           --------->ARR11(3)                      --------->AHL20(2)       ---------->DOF2                       --------->YAB1    --------->ZAT6      ---------->DOF2      <-----------GT1                ------>MYB83   <--------- ----AHL20(2)   --------->MYB59           --------->YAB1                    ------>MYB46(1)---------- --->AHL20(2)  <---------MYB55(1)<---------At4g35610          <-----------GT1--------->ARR14(2)     < ------->YAB1 <---------MYB52(1) --------->At4g35610<---------AHL20(2) <-----------GT1   ---------->DOF2   attgtaacacaaagatgttaggtgaaaaaagaaacagatgacaaaaatcacaatttaatatagtttacatttttaaccaaatattcttacaaaaagaaaa  6516900                              <---------ARR11(3)               <---------YAB1 --------->ARR11(3)     --------->ZAT18         --------->RVE1(1)     <---------ZAT18         --------->CCA1(1)                                      <---------ANAC58     --------->ZAT14      <---------AHL20(2)                                        <---------ANAC58 <---------------AtSPL8  <---------AHL20(2)                                 <---------ZAT14 -ID1<---------ZAT14 <---------YAB1                    <---------ANAC58     --------->ZAT14        <- ->GT1   <----------DOF2 --------->AHL20(2)            <---------ANAC58     ------------>CBF    <---- ------------CBF  <---------YAB1                   <---------------AGL15 <---------At5g28300 <-------   aagattgtacactttgtatgattcttattaaatatctagtgagtagtctcattccattcgtggtataatgctattcactgcaatttgcttctgttcttta  6517000                                                                                                    <                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                               <-----                                   <-----------GT1               <---------AHL20(2)          <-------     <----------DOF2              ---------->ID1       --------->ARR11(3)                    <------- --------DAG2                <----------DOF2           <---------ARR11(3)                  --------->At4g35610 -------GT1             <---------DAG2                <---------CCA1(2)   --------->ZAT14  <---------ZAT2 ---DOF2                <----------DOF2      <------------CBF   --------->AHL20(2)         <---------At4g35610   acctttcctttgttcgtcttcagtaacttttcttttgtcactatctaaattgttttatatctctcatttaatgctctgttctcagtgattttcagctgtt  6517100                                                                                              -------                                                                                              <------         <---------ANAC58                                ------>NtERF2                      ---------       <-----------GT1                                   <------NtERF2                      --------- --------->MYB52(2)                                     <---------DEAR3(1)             <----------ID1 -------TEIL                                           <---------ANAC58                <---------ETT(2) ------DEAR3(2)                                --------->AHL20(2)                      <---------bZIP60(1) ---MYB46(1)                                   <---------AHL20(2)                      --------->bZIP60(1) ---MYB83<---------ANAC58                      --------->AHL20(1)                     --------->RAP2.6(3) ----->MYB55(2)                                <---------AHL20(1)                   ----------->TGA1 ------MYB46(3)                               --------->AHL20(2)                  <---------ICU4 ----MYB52(1)                                 <---------AHL20(2)                  --------->YAB1 --MYB46(3)                               --------->AHL20(2)                 --------->ARR14(2) ----RAV1(1)         <-----------GT1   <----------DOF2 <---------ANAC58      <---------ARR14(2)   ggttcgtttttacttgtgagttttttcaaatcacaaaaactctttaaaataaattaggcgggcgatttcaagttgttcatatactcatgacgacaagaac  6517200                       <-------TEIL                    <---------HSFB2a(1)                    <---------HSFC1(2)               <---------HSFB2a(2)               --------->HSFC1(1)                                                                   -    --------->YAB1  --------->HSFC1(2)                                                   <----------DOF2 -->ARR11(3)   <---------HSFC1(1)                                             --------->MYB52(2)   <- ---ARR11(3)   --------->HSFB2a(2)      --------->TOE2(3)   <---------At5g28300      <---------At4g35610 >ANAC58       >>>>>>>ZML2             --------->ATHB12    <-----------GT1 --------->TOE2(3)      <-- >ANAC58  --------->HSFB2a(1)      <<<<<<<<<TBF1     <---------AHL20(2)    --------->TOE1(3)      ---   ttcgaatcacaaacgttctagaaggttcactctcttcttcttcattagtttatatttcattttacagtcttgtcttaccttagtttctgctctttccagc  6517300               --------->RVE1(1)              --------->GLK1(2)              --------->ARR11(3)              <---------ARR11(3)         --------->ANAC58                                                   ---------->DOF2         --------->ANAC58                                             --------->ARR14(2)     <<<<<<<<   <-----------HVH21                                                  --------->GLK1(2)  <---------AHL20(2) ----->ZmHOX2a(2)                                                     <---------KAN4(2) --------->AHL20(1) -----ZmHOX2a(2)                  ---------->DOF2                    <---------GLK1(2)  <---------AHL20(1) -------ARR14(2)           --------->AHL20(2) <----------DOF2       <------ZmHOX2a(1)--------->AHL20(2) ------>ARR14(2)        --------->YAB1    ------>NtERF2        <-----------HVH21 ----------->GT1-----   gatccggtcccaagaaaatctctcaagaataaaaaatcaagcgaggccctttacaacattcacatggtcaggaatcttcaaaggtgtttatatatttttc  6517400                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                      <----------DOF2                                                     <----------DOF2              --------->RVE1(1)                                            <---------TOE2(3)                    --------->ARR11(3)                            --------->ARR11(3)     ------->TEIL                  <---------ARR11(3) <<GT-3b   --------->YAB1   <---------ARR11(3)<------ZmHOX2a(1)            --------->At4g35610  ----- ---->TOE2(3)     <---------ATHB12       <----------DOF2                  ----------->GT1 ---------->DOF2   ttaatcttcttgatcatcaaatcaacttaagttcttaattgttctttaggatgaacttttgcagagagagatagaacagctaaaatctcttttaaagtcc  6517500                    <------ZmHOX2a(1)                   --------->At4g35610                 <-----------RAV1(2)           <---------LBD16                                                                          -           --------->LBD16                                                                         --           <---------ANAC46                                                                        <-          <---------LBD16                                                                         ---    <-----------GT1<---------At4g35610                                                            <-- ------->GT1 --------->LBD16                 <---------TOE2(3)                                    <-- ----->LBD16--------->LBD16           ----------->GT1                    <---------TOE1(3)        <-- -----HSFB2a(2) <------NtERF2        <---------TOE2(3)                   <---------TOE2(3)        --- ---->HSFB2a(2)------>NtERF2  --------->ANAC55(2)         --------->ANAC46                --------->YAB1   agaaaattacatcccgggggcaggagagtctcaagtgatgaggttttaagaaattttttcacagaagattgtttttaggtttctaagaaaaatcaaaaca  6517600           <-----------GT1        <----------DOF2     <---------ARR11(1)     --------->ARR11(3)           <---------AHL20(2)    <---------CCA1(2)        <---------WOX13(1) ----->ZmHOX2a(2)       --------->ZAT14     --------->HSFB2a(2) ------->GLK1(1)        <---------ZAT14 <---------ANAC58 -----ZmHOX2a(2)        <---------At4g35610 <---------HSFB2a(2) ------>ARR14(2) <---------ZAT14  --------->AHL20(2) -------ARR11(3) <---------ARR14(2)     <---------ANAC58           <---------ANAC58        --------->ANAC58 -------ARR14(2) --------->ARR14(2)--------->ATHB12                <---------ANAC46        --------->ANAC46 -------AGP1<---------At5g28300--------->ATHB12                    <---------ANAC58        --------->ANAC58 ------>ARR11(3) --------->ZAT14 <---------WOX13(1)             <---------DEAR3(1)    ------>ZmHOX2a(1)   gatctcaaatcttttactgtatactctgcagattgatttattgcttcaagaagatgaagtcttagttcggcgtgaaatgaagacagtccttggacgcaaa  6517700  Previous    Next  AGI:  At3g18900.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G18910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47675.1); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Protein of unknown function DUF547 (InterPro:IPR006869) Range:  from: 6517187    to: 6520798    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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