Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ------->TEIL             <-------TEIL         <---------------AtSPL8         --------------->AtSPL8         <---------TOE2(3)       <---------AHL20(2)      --------->AHL20(2)                                                       --------->ANAC46   --------->ATHB51           ----------->GT1                      --------->RVE1(1)   --------->AHL20(2)  --------->YAB1              <---------CCA1(2)   --------->TOE2(3)      <------  <---------MYB52(1)   ----------->GT1   <---------YAB1        --------->AHL20(2)     ---------->DOF2  --------->ICU4      <---------ATHB12<---------YAB1------->TEIL   --------->CCA1(1)<---------YAB1<--   agccattatttaatgtacatactaatcgtgaatagtgaatatgatgaaacattgtatcttattgtataaatatccataaacacatcatgaaagacacttt  6474500                                                                                              ------>NtERF2                                                                                             --------                   <---------YAB1                                                         --------->ANAC46                 <---------ICU4                                                         ------->GAMYB                 -------->HAHB4                                                        <---------MYB55(2)                 --------->YAB1                                                        --------->MYB46(3)                <---------ATHB51                    <---------ANAC46                  -------->P                --------->ICU4<---------YAB1  <---------AHL20(2)                      ------>MYB46(1)             --------->AHL20(2)               --------->AHL20(1)                 --------->ANAC46  <---------At5g28300       --------->YAB1    --------->AHL20(2)                 --------->ANAC58 ----DOF2    --------->AHL20(1)              --------->AHL20(2)                  --------->ANAC58---- --------DOF2<---------AHL20(2)              <---------AHL20(2)        <---------YAB1 ------>MYB83 <-   ctttcacggtctgaattaattatgatacaattctaatagaaaacgaattaaattacgttgaattgtatgaaatctaattgaacaagccaaccacgacgac  6474600                                                                              ----------->HVH21         <---------LBD16                                              ------>ZmHOX2a(2)        <---------ANAC46                                        <-------MYC3 <-----------HVH21        <---------AtLEC2                                ----------->GT1  <---------ZAT2        <---------ANAC58                                <---------ANAC55(2) --------->ANAC58        <---------ANAC58                                --------->ANAC55(2) --------->At4g35610  <---------TOE1(3)                              --------->At4g35610<---------ARR14(2)  <---------TOE2(3)                              --------->ZAT2 ------->MYC3--------->ANAC58       -- --------->MYB52(1)                              <---------ZAT2 <---------LBD16                  ---- ->DEAR3(1)                <---------TOE2(3)     <---------At4g35610--------->ARR14(2)    --------->ANAC58 -->NtERF2    <---------WOX13(1) --------->MYB46(3) <-----------HVH21<------ZmHOX2a(2)    --------->ANAC58 --------MYB52(2)      <----------DOF2     --------->MYB52(1)  --------->ANAC46      --------->YAB1--   gactaacgttgcctggattgactcggtttaagttaaccactaaaaaaacggagctgtcatgtaacacgcggatcgagcaggtcacagtcatgaagccatc  6474700                                                                                            <--------                                                                                         <---------MYB52(1)                                                                                         --------->DOF5.7(2)                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC55(2)                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->O2                                                                                   <-----------HVH21                               <---------AHL20(2)                                 --------->At4g35610                               --------->AHL20(2)                                 <---------At4g35610                              <---------WOX13(1)                                  --------->bZIP60(2)                            --------->ATHB12                                      --------->TGA1a ---   ---------->DOF2          ----------->GT1                      --------->DAG2   =================== ------->ANAC58            <---------YAB1                      =============================bZIP_DOF< ------>DOF2               --------->ICU4             --------->ZAT6     ----------->HVH21 <---------ARR11(3) ------->ANAC58          <---------At4g35610<---------ICU4     ---------->DOF2    --------->O2<------   aaagcaaaagaactaatccaagggctgagatgattaattagtttaaaaattagttaacacgagggaaaaggctgtctgacagccaggtcacgttatcttt  6474800                <---------ANAC58                <---------ANAC58       <---------AHL20(2)            --------->ATHB12         <---------YAB1            -------->HAHB4         <---------AHL20(2)           <---------ATHB12        <---------ICU4   <---------MYB46(3)              --------->AHL20(2)  --------->ALFIN1                 --------->ATHB51                                                 <  <---------AtMYB61            <---------YAB1---------->DOF2                          <---------AHL20(2) -YAB1     --------->ICU4      --------->AHL20(2)          --------->DAG2      --------->LBD16  <---- -------->RAV1(2)              <---------AHL20(2)         ---------->DOF2      ------>NtERF2   <----- ====bZIP_DOF   <---------ANAC46  --------->ICU4    <------NtERF2             --------->ANAC46<------ -----------RAV1(1)           <---------AHL20(2)   --------->RAP2.6(2)       *TSS     --------->AHL20(2) ----DOF2  <---------YAB1     --------->AHL20(2)   ----------->GT1        <-----------GT1  <-------TEIL   acctgtggtcgaaatgattcgtgtctgtcgattttaattatttttttgaaaggccgaaaataaagttgtaagagataaacccgcctatataaattcatat  6474900                                                                   --------->O2                                                                   <---------O2                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                             <---------DEAR3(1)                                                  <---------MYB52(1)                                            --------->MYB46(3)------>NtERF2                                           <---------At4g35610--------->LBD16    ------>ZmHOX2a(1)                    --------->YAB1     <---------LBD16 <-----------GT1                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -----------GT1                       <----------DOF2    <---------GLK1(1)          --------->ANAC46 -----AHL20(2)                    ------>ZmHOX2a(1)     ------->TEIL                --------->ANAC58 ----AHL20(1)                  ------>ZmHOX2a(1) <---------RAP2.6(3) ----------->HVH21 ---CCA1(2)<----------DOF2--------->WRKY12 --------->At4g35610<---------ATERF1(1)   --------->ANAC58   attttcctctccgctttgaattgtctcgttgtcctcctcactttcatcagccgttttgaatctccggcgacttgacagagaagaacaaggaagaagacta  6475000                                                                                                   --                                                                                                   <-                                                                                                  <--                           <-------TEIL                                                        <-----                      <------ZmHOX2a(1)                                                       -------                    --------->LBD16               ------>ZmHOX2a(1)                           -------                   <---------LBD16               --------->TOE2(3)          <----------DOF2   <------                --------->GLK1(2)          ------->TEIL                 <----------DOF2       <------             --------->ARR11(3)      <---------MYB52(1)               <----------DOF2      ==========   ---------->DOF2 <-----------RAV1(2)    <---------CCA1(2)         <---------At4g35610    <------ZmHOX2a(1)   agagagaaagtaagagataatccaggagattcattctccgttttgaatcttcctcaatctcatcttcttccgctctttctttccaaggtaataggaactt  6475100        <---------DAG2                                    <---------GLK1(1)        <----------DOF2                               <---------HSFB2a(2)    ------>ZmHOX2a(2)                                 --------->HSFB2a(2)  --------->ARR14(2)                                 ------>ZmHOX2a(2)  <---------AGP1                                    <------ZmHOX2a(2)  <---------ARR14(2)                                --------->CCA1(2)  <---------ARR11(3)        ------>ZmHOX2a(2)      <---------AGP1 ------->HSFB2a(2)        --------->ARR11(3)       --------->ARR11(3) --------HSFB2a(2)        <---------ARR11(3)       --------->AGP1 -------LBD16       --------->ARR14(2)             --------->ARR14(2)            ------->TEIL -----DOF2          <---------AGP1                 <---------ARR11(3)      ------>ZmHOX2a(2) -->HSFB2a(1)       <---------ARR14(2)            <---------GLK1(1)      --------->ARR14(2) -->HSFC1(2)        <---------ARR11(3)           ----------->ARR10       <---------ARR14(2)    <----- ---HSFB2a(1)       --------->ARR11(3)       <---------ANAC58    --------->AHL20(2)         <-------- ---HSFC1(2)       <---------CCA1(2)<-----------GT1<---------ARR14(2)    <---------AGP1     --------- ==========HOX2a_HOX2a------>ZmHOX2a(2)      <---------ANAC58    <---------AHL20(2)     --------->ANAC46   tctggatctactttatttgctggatctcgatcttgttttctcaatttccttgagatctggaattcgtttaatttggatctgtgaacctccactaaatctt  6475200                                     --------->At4g35610                                     <---------At4g35610                                    --------->MYB59                                  <---------MYB52(1)              <---------WRKY18(1)             ---                              <------ZmHOX2a(2)                  ----------->HVH21       <-------TEIL                        <---------WRKY18(1)              --------->GLK1(2)         <-------TEIL   <--                        >>>>>>>>>>WRKY6                 <---------GLK1(2)         <------ZmHOX2a(2)       --------->HSFB2a(2)-------->ZAP1              <---------HSFB2a(2)         --------->AGP1   ---    <-----------GT1     >>>>>>>>>>WRKY11             --------->HSFB2a(2)         --------->ARR11(3) -----DOF2             --------->WRKY38(1)         -------->P  <---------ANAC58  <---------ARR11(3) - -ARR11(3)             ----------->HVH21           --------->MYB52(1)           <---------GLK1(1)<--- >ARR11(3)             --------->WRKY12     --------->YAB1     <---------ANAC58 --------->GLK1(1)----   ttggttttactagaatcgatctaagttgaccgatcagttagctcgattatagctaccagaatttggcttgaccttgatggagagatccatgttcatgtta  6475300       --------->ATHB12      --------->ICU4 ------>TOE2(2)                                                 <-----------HVH21 -------LBD16                                                 <<<<<<<<<TAC1                     <---- ------>TOE1(2)                                             --------->ZAT6             --------->ZAT6 -------->LBD16                                            <---------ZAT14            <---------ZAT14 ------ANAC46                                              --------->ZAT14            --------->ZAT14 ------->RAV1(2)           <---------GLK1(1)         ------->TEIL               ------->TEIL    <----   cctgggaaatgatttgtatatgtgaattgaaatctgaactgttgaagttagattgaatctgaacactgtcaatgttagattgaatctgaacactgtttaa  6475400  Previous    Next  AGI:  At3g18779.1    Description:  unknown protein Range:  from: 6474548    to: 6474691    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g18780.1    Description:  ACT2 (ACTIN 2); structural constituent of cytoskeleton. Identical to Actin-2 (ACT2) [Arabidopsis Thaliana] (GB:Q96292;GB:Q42056); similar to ACT11 (ACTIN-11), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G12110.1); similar to ACT8 (ACTIN 8), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT1G49240.1); similar to ACT7 (actin 7) [Arabidopsis thaliana] (TAIR:AT5G09810.1); similar to actin 8 [Arabidopsis halleri subsp. gemmifera] (GB:AAY29145.1); similar to actin [Striga asiatica] (GB:AAC49651.1); similar to actin [Brassica oleracea] (GB:AAD02328.1); contains InterPro domain Actin/actin-like; (InterP Range:  from: 6474877    to: 6477210    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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