Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ANAC58        <----------DOF2                              <                               <---------ANAC58        <---------DAG2                              <-       --------->ARR11(3)      <---------ANAC46     <-----------GT1                                <-       <---------ARR11(3)   <---------MYB52(1)     <-----------GT1                   <----------DOF2< --------ANAC46  --------->At4g35610           <----------DOF2 <----------DOF2    ------>ZmHOX2a(1)<- ---MYB46(3)  --------->At4g35610        ------>ZmHOX2a(1) ---------->ID1     <-----------GT1 <------ -->MYB52(2)  <---------At4g35610    <-----------GT1---------->ID1      <---------MYB52(1)<---------AHL20(2)   ggagtagacgatattgagcagattacatctgtttcgttttctccttcttcttttttcctttttctctttaatctgttttgtttcctcctttttatattgt  6465400                                                                                                -----                                                                                          <---------YAB1                                                                                        <---------GLK1(1)                                                                                        --------->GLK1(1)                                                                                       --------->ARR11(3)                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               --------->AGP1   <----                                                                               <---------AGP1  ------                                                                               --------->ARR14(2) ---------DAG2                                    <---------ARR14(2)           <---------ARR14(2) --------ANAC46                           --------->At4g35610                  --------->ARR11(3) --------ANAC58                        ---------->DOF2                         <---------ARR11(3) ----------DOF2                  <---------AHL20(2)                           <---------CCA1(2)------ --------ANAC58                 --------->AHL20(2)--------->ARR14(2)         ----------->ARR10 ------ -----RAV1(1)         --------->AHL20(2)  <---------At4g35610       --------->GLK1(2)  <---------ARR11(3)   tgcttttttagcaaaaaatatgaattaaaaactatataatacaaagctcacatatatgcaggcagacaagtttctggtttagatcttgagatatcattcc  6465500                          <-----------GT1                      <-----------ARR10             --------->ARR14(3)             <---------ARR14(3)             <---------ARR14(2)             <---------ARR11(3)  ---------->DOF2             --------->ARR11(3)  <---------ZAT14                     <---------WRKY18(1)             <---------GLK1(2)   --------->ZAT14                <---------YAB1           ----------->ARR10 --------->ZAT6                  <------ZmHOX2a(2)      ---------->DOF2 <---------ARR14(2)              --------->YAB1--------->WRKY38(1) ---------->AGL15     --------->ARR14(2)             <---------YAB1 --------->WRKY12 <-----------GT1 -----------AGL15    <---------CCA1(2)              <---------ARR11(3)    ------>MYB46(1)    <------- ----------->AGL3  <---------ANAC58     ---------->DOF2     --------->AGP1------>MYB83<---------At5g28300 ----------->AGL1  <---------ANAC46     <---------ZAT14    --------->At4g35610   <----------DOF2<---- ----------->AGL2  <---------ANAC58  ----------->GT1--------->ARR11(3)  <---------MYB59      --------   aatatcagtaaagaagattttgcgtatattaccagtaaagagtaaagagactaatatcatcagatcaacattgacctatctatctttttactgtcactat  6465600                                                              <--------HAHB4                                                              <---------ICU4                                                              --------->YAB1                                                              --------->ATHB12                                                             <---------ATHB12                                                             --------->ICU4      <---------MYB52(1)                              <---------ANAC58              <-----------GT1   <------------MYB.PH3(1)                            <-------GAMYB          --------->ANAC55(2)   <------------AtMYB77                       ----------->HVH21              <------MYB46(1)  <---------At5g28300                       --------->ANAC55(2)              ----------->GT1 <-----------GT1                            <---------ANAC55(2)              <---------ANAC55(2) ------------>MYB.PH3(1)              <---------AHL20(2)   --------->WOX13(1)<------MYB83---------->DOF2 --YAB1           <-------TEIL     ----------->GT1    <---------ANAC58      --------->MYB46(2) -----YAB1   ---------->DOF2   <---------AHL20(2)    <---------MYB46(3)     <---------TOE2(3)    ---- ->ICU4  <---------YAB1       --------->AHL20(2)  <----------DOF2           --------->MYB59    ------   tagtaaccgttattctaaagtacatttgtatattatatagtaaattatgtgactttggttgcaatcatttccaaaaattaggtaatttactgaaaggaaa  6465700                                                                           <---------TGA1a                                                                           ==================bZIP_DOF                                                                           --------->TGA1a                                                                          ------->MYC3                                                                          <-------MYC3                                                                    =========================bZIP_DOF                                                                    --------->ANAC58                 --------->ARR11(3)                                 ----------->HVH21                 <---------ARR11(3)                                 --------->ANAC58        <--------ATHB1                 <---------AHL20(1)                            ----------->HVH21            ---------     <---------TOE2(3)                                <---------YAB1--------->O2  ---------->DOF2    <-----------GT1    <---------YAB1               <---------ICU4  --------->ANAC46       <---------ATHB51 ------->GT1     --------->AHL20(1)                 --------->YAB1  --------->bZIP60(2)    <---------ATHB12 ---->DOF2      --------->CCA1(2)                  --------->ICU4   --------->TGA1a    ------------>CBF   agaaataaacgttttcagatatattttgatttttctcttaaaaaacagtgagaattatgaatgaagcgacacgacacatgtgagaaaagctcaataatac  6465800                               <----------DOF2                         <---------ALFIN1                           <---------YAB1                        --------->ZAT14                           --------->YAB1                        <---------ZAT14                          <---------YAB1             ----------->RAV1(1)                              --------->MYB46(3)            <----------ID1     *TSS                      <------NtERF2     --------->YAB1   --------->ANAC46                  ------>NtERF2                  --------->MYB46(3)    <---------YAB1  --------->ANAC46                   <---------ETT(2)       <-------TEIL         <- >YAB1   XXXXXXXXXXXXXXXXXXXX>MIR863-3P             <-----------RAV1(1)      --------->CCA1(2)  -----   atgagaattatagagcaacaaaacacaacactgctttacaactatcaaatactagtgtcgccaaaccatcataatagagatacaactcaacaaatgtcct  6465900                                                                                        <---------ATHB12                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                              <---------HSFB2a(2)                             <---------YAB1                                   <---------HSFC1(1)                          <---------AHL20(2)                                  --------->HSFB2a(2)                         --------->AHL20(2)                             <---------ICU4  <---------YAB1                     <---------AHL20(2)                                 --------->ATHB51--------->ICU4         --------->YAB1 <---------YAB1                                  --------->AHL20(2)      --------->YAB1 --------->AHL20(2)                                <---------AHL20(2)     <---------YAB1  <---------YAB1        <---------ATHB12            <---------AHL20(1)-------->HAHB4   --------->YAB1 <---------AHL20(1)      ------>MYB83                 --------->AHL20(2)--------->ATHB12  <---------YAB1  --------->AHL20(1)      ------>MYB46(1)          --------->YAB1<------ZmHOX2a(1) --------YAB1  <---------AHL20(2)      --------->ANAC55(2) <-------GAMYB<---------AHL20(2) <---------WOX13(1) ->ZmHOX2a(1)  --------->AHL20(2)      <---------ANAC55(2)<---------MYB46(3)  --------->HSFC1(1)   cttgattataatcagaattatatattattatatgatacaatacctatcaagttttgtttttggttgtaatcaaattatttctaggacgaaatgattgtcc  6466000                  --------->CCA1(2)                 --------->ARR14(2)                 --------->ARR11(3)                 <---------ARR14(2)              <---------TOE2(3)                                                         <---------PCF2   --------->ANAC58                               ---------->DOF2                <----------DOF2   --------->ANAC58                            --------->ANAC46               --------->ARR11(3) ---------->DOF2<------ZmHOX2a(1)        <----------DOF2  <------ZmHOX2a(1)   <---------ARR11(3)    -   ctacaaagcaattggtaaggatatggtaagaggcacaatctctctttatacacaaaggaaggactcatgggattggataagctctttctgggtccctaat  6466100                                                           <---------AHL20(2)                                    ------>MYB83           <---------AHL20(1)                                    ------>MYB46(1)        --------->AHL20(1)                                   ----------->RAV1(1)--------->AHL20(2)                            --------->HSFB2a(2)       --------->AHL20(1)                            <---------HSFB2a(2)       <---------AHL20(1)                       <---------HSFB2a(1)      =========================HOX2a_HOX2a                       --------->HSFC1(2)       ------>ZmHOX2a(2)                      ---------->DOF2                       --------->HSFB2a(1)    <---------ARR11(3)                     <---------YAB1 <---------ICU4        <---------HSFC1(2)     --------->ARR11(3)  ------>ZmHOX2a(1)--------->YAB1   < ----->ZmHOX2a(1)---------->DOF2 --------->MYB46(3)   <---------ARR11(3)          <---------YAB1  <--   tcctcatttcattttcagagaaagaagtttccaaaaccaacatttagtgatctctatatattatattcctattccccactaagtatcatcaaagctatat  6466200                                --------->AtMYB61                          ---------->ID1                                <---------MYB59                           <-----------GT1                             <-----------GT1                          <---------AHL20(2)                     --------->ANAC58                               <---------CCA1(1)                 --------->ANAC46                                   <---------RVE1(1)        <----------DOF2    <---------ATHB12                        <---------GLK1(2)     <---------ALFIN1--------->ANAC58                              <---------ARR11(3)        <-------  --------->ANAC46--------->MYB46(3) --------->AtMYB61             --------->ARR11(3)    <----------DOF2 -----------GT1  --------->ANAC58 ------>MYB83 ------>ZmHOX2a(1)  <---------RVE1(1) ---------->DOF2-- -------AHL20(2) --------->ANAC58 ------>MYB46(1)         --------->MYB52(1)   <----------DOF2     <-   ataaacaccactttgaatcacccaaggcaataaaccaaaccaaaacttcctaagaaaaaaaaacagagagattttttttctctttctaaagcttttttat  6466300  Previous    Next  AGI:  At3g18773.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G49200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75293.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6465831    to: 6467181    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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