Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ANAC55(2)                                   ------>MYB83     <----------TaMYB80            ------>MYB46(1)      ------>MYB46(1)    ---------->TaMYB80           <---------MYB59     --------->ANAC46    <---------ARR14(2)           --------->AtMYB61 <-----------GT1    --------->ARR14(2)          ----------------->AGL1<---------MYB46(2) ----->ZmHOX2a(2)         --------->ZAT6  <---------ZAT18                                  <---------At4g35610 -----ZmHOX2a(2)         --------->ZAT14 <------ZmHOX2a(1)           <---------ICU4        --------->At4g35610 ------>ARR14(2)         <---------ZAT14--------->ANAC46------>MYB83--------->ICU4         <------NtERF2 ---ALFIN1  <----------DOF2     <-----------------AGL1--------->MYB46(3)<-----------GT1   -----------   gatcggtatatgctctttcgcattccgaacactgaccaaaccaggacacttattcaccaaacactctgcaattcttacaattccaccagtggcagcataa  6426100                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                              --------->ARR11(3)                                                                              <---------ARR14(2)                                                                              <---------ARR11(3)                                                                              <---------ARR14(3)                                                                              --------->ARR14(2)                                                                              --------->ARR14(3)                                           <---------LBD16          ------>ZmHOX2a(2)       <--------                  <---------YAB1   --------->ZAT6                 <---------ARR11(3)        ---------               <---------YAB1 <----------DOF2                     --------->ARR11(3)       --------->MYB46(3)             <---------ICU4  ------>ZmHOX2a(2)     <---------YAB1--------->YAB1        ----------->HVH21     <---------ANAC46      <---------ARR11(3)    --------->YAB1 <---------ATHB12------>ZmHOX2a(2) >RAV1(1) <-----------GT1  --------->ARR11(3)   <------ZmHOX2a(2)<---------ICU4<------ZmHOX2a(2)  ---   gtaagcgctgtataaccattatcgttcttgatctttaacacttgctctggatcatgaattcttctaatgatctcttccacgatcttgatgtgacccgaca  6426200                                            --------->At5g28300                                            <-------GAMYB                                           <---------MYB46(3)                                          <---------ANAC46                                          <---------RAP2.6(2)                                          <---------ANAC58                                          <---------TOE2(3)    <----------DOF2                       <---------ANAC58    <---------DAG2      --------------->AGL15 --->RAV1(1)            <---------------AGL15                                       <---------ANAC58 >ANAC58               ----------------->AGL3                                       <---------ANAC58 >ANAC58          --------->ALFIN1       <---------LBD16                            <---------ANAC46 >ANAC46        <---------ANAC58    <---------TOE2(3)                          <---------ANAC58 -ETT(1)<---------TOE2(3)           <---------TOE1(3)                          <---------ANAC58 <---- -->HVH21 --------->ATHB12    <---------TOE2(3)---------->DOF2                 <---------ANAC46<----- ------>MYB52(1)<---------ANAC58    <---------YAB1    <-----------RAV1(2)   <----------DOF2    ------   aaacagctttatggattggagtgtctccattagaggttaagattgcggttaaagcttcagggtttcggtccaagaagtctttcgtggcttccaactctcc  6426300                                                      <----------DOF2                                                    ---------->ID1                                              <---------ARR14(2)               <---------ARR14(2)                                              ------->TEIL                     --------->ARR14(2)                           <------MYB83       --------->ARR14(2)        <----------DOF2                           <------MYB46(1)    <-----------ARR10       --------->At4g35610                          --------->MYB59     <---------ARR11(1)      <---------At4g35610                      --------->ANAC58       <---------CCA1(2)     <---------At4g35610                      --------->ANAC58       <---------ARR14(1)    --------->At4g35610 -----ALFIN1      <------ZmHOX2a(1)        <---------ANAC58      ------>ZmHOX2a(2) ----ZAT14       <----------ID1            <---------ANAC58    --------->ARR14(2) --->ZAT14<---------HSFB2a(2)             ---------->ID1       <---------ARR14(2)------>ZmHOX2a(2) --   actgtctatgttcttgaagaggacaagataggtcgagttctcttgtcgtatctcgtctttttgtagatcggctgcttcatcgatctgcatactatcaaac  6426400                                                                                                <----                                                                                               ------                                                                                            ---------                 --------->ARR14(2)                                                        --------->ANAC46                 <---------ARR14(2)                                                 <---------ANAC58           --------->PCF2                                                           <---------ANAC58           ------>NtERF2                                                         <--------P--------->ANAC58          <---------PCF2                                                         <---------MYB52(1)       --------->HSFB2a(2)                                                      <-------GAMYB  ------       <-----------RAV1(1)                                                     <---------MYB46(3)       <---------HSFB2a(2)                                                     <---------DEAR3(2)     ----------->RAV1(2)                                                      <---------At1g77200    --------->GLK1(2)                           <---------LBD16               <---------DREB2C(2)   <  <---------HSFC1(2)                    ----------->HVH21           <---------ARR14(2)     --------->ANAC58  --------->HSFC1(2)                <---------ZAT14                 --------->ARR14(2)    <---------LBD16 -------->DOF2  <---------MYB52(1)  --------->ZAT14        <----------DOF2 <-----------RAV1(1) ------   cgaaagcttctggggcccgtttctggtcgtagactctctgctctgaaacctctgggataacctttctcggtatccatttgtcggttgcttctcccgcaag  6426500     <---------AtMYB61  --------->ALFIN1 <-------MYC3                                                              <---------MYB52(1) ------->MYC3                                                        <----------DOF2                - -----MYB52(2)                                                    <---------ARR11(3)               <- --->ANAC58                               <---------AHL20(2)      <---------ARR11(1)               -- >LBD16                                   <---------YAB1          --------->ARR11(3)               -- --->ANAC46                          <----------DOF2              <-----------ARR10          <-------MYC3 ---------O2                  <------------CBF                   <---------CCA1(2)           ------->MYC3 --->ANAC58             ----------->GT1 --------->YAB1 ---------->DOF2    <-------GAMYB    <-------TEIL   aaacgtggtggtatgtgtttgtttaagtgtaaaattgttcttttataatttttctgtaaaagaaaacatatctttccgttattcgaacagaggcacatga  6426600                                                                                        <---------YAB1                                                                                       --------->AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                      --------->YAB1                                                                                     <---------YAB1                                                                                    --------->TOE2(3)                             <----------DOF2                                       --------->YAB1                           <---------YAB1                                      --------->AHL20(2)                         <---------CCA1(2)                               --------->ANAC55(2)        ---------->DOF2<---------ANAC58                                  --------->ANAC58   <---------ZAT6      <---------ANAC46                          --------->ANAC58  <---------ICU4   ----------->GT1     <---------ANAC58                     <----------ID1 --------->AHL20(2) -------->DAG2        <------NtERF2             <------ZmHOX2a(1)--------->ANAC58<-----------GT1 --------ZAT14      <---------RAP2.6(2)        <----------ID1--------->CCA1(2) <---------AHL20(2) -------->DOF2   <---------AtMYB61--------->ANAC58      ---------->DOF2  --------->ANAC46       ----- ------->ZAT14   --------->ALFIN1 --------->ANAC58 ---------->DOF2       --------->ANAC58--------->YAB1   gtaaagtgttaaaagagttgtggtggcttatctttgaagcaaggtttcaaggacaaagaaaagagacaaggattcaagtaattaaacattataataaact  6426700                                                  <---------YAB1                                                <---------ICU4                                               --------->ICU4                                  <-----               <---------WRKY18(1)           <---------ICU4                                   <------          <---------YAB1                    <------ZmHOX2a(2)                             <---------DAG2        --------->KAN4(2)                   <---------YAB1                                <----------DOF2        --------->YAB1--------->YAB1       --------->ARR11(3)                          <-----------GT1       <---------KAN4(1)           --------->ARR11(3)                               <----------DOF2       --------->KAN4(1)           <---------ARR11(3)                            <-----------GT1 ----      <---------KAN4(2)        ---------->DOF2 <---------YAB1                 --------->MYB52(2)----- ------>GT1 --------->TOE2(3)<---------YAB1<---------ARR11(3)<-----------GT1  <---------MYB46(3)<----   gtaatacgaataatccttgactattcataccatgaaagatttcaagatcattatcagtgtttttttcttcttatatgtgtttgttacttttacttttccc  6426800        ---------->DOF2      <---------AHL20(2)  --------->ICU4 <---------KAN4(2)                                --------->ANAC58                        ----------- ----LBD16              <---------ZAT6            --------->ANAC58                      <---------ANAC55(1) ---LBD16          <----------DOF2              ---------->DOF2                         <---------ANAC58 ----->LBD16 <------ZmHOX2a(2)             <-------GAMYB                                <---------ANAC58 ---->LBD16 <---------ARR11(3)         --------->ANAC46            <-----------GT1      <---------ANAC46 -----LBD16 --------->ARR11(3)       <-----------GT1 ---------->DOF2                   --------->MYB52(2)   gggaatatttaaaagatcgagctttagtgttacaaaaatttacgtcgttgcaaagcaaagaatttagtttcactcttcaaaaacaatgttacttgtaaat  6426900                                                               --------->ANAC58                                                               --------->ANAC58                                                       --------->ATHB12                                                    --------->ANAC58                 --------->ARR14(2)                                                <-----------GT1----------->GT1     <---------MYB46(3)   --------->ICU4                --------->ANAC58   --------->ANAC58          <----------DOF2 >GT1                            --------->ANAC58   --------->ANAC46  --------->YAB1 <---------ARR14(2)   ttgcaattagtaaacttttaaaacttgaacttggtaagaaaactcatatttttcaagtcattgaaacgaaaataagaatgctttgtggttcttcacttct  6427000  Previous    Next  AGI:  At3g18670.1    Description:  ankyrin repeat family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68568.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 6424141    to: 6426477    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version