Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------ANAC58                                     --------->MYB59                                   <---------MYB52(1)                                   <--------P                              =============================HOX2a_HOX2a                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            --------->ARR11(3)                     <---------TOE1(2)<------MYB83                     <---------TOE2(2)<------MYB46(1)               --------->ANAC58 ------>ZmHOX2a(1)          --------->At4g35610==============================HOX2a_HOX2a      ----------->RAV1(1)   <---------ARR14(2)     --------->MYB46(3)     --------->ARR14(2)  --------->REM1(1) ------>ZmHOX2a(1)<---------AtMYB61                                            <-- ------>At4g35610   ================HOX2a_HOX2a                                                   --- -------At4g35610   =================HOX2a_HOX2a                              <---------ALFIN1   ---- ----CDC5------->GAMYB<-----------RAV1(1)  <---------ANAC58   <-----------HVH21           <---------- --->RAV1(2)   --------->ANAC58 --------->LBD16     <------ZmHOX2a(1)       <---------------AGL15----   agcttcaacaacagcgcaagtcctatgttggatcctggttaggtttcgttccaaggactgaaccagtcccatgagttgctccacagagtaattgtcaaac  6418100                                 --------->ANAC58                                 --------->ANAC55(1)                                 --------->ANAC58                                 --------->ANAC55(2)                                 <---------TGA1a                                 ===================bZIP_DOF                                 --------->O2                                 --------->ANAC46                               <---------ALFIN1                         =============================                       ====================bZIP_DOF                     <------ZmHOX2a(2)    <-----------------AGL1    <-------TEIL                             <---------ARR11(3)    ----------------->AGL2 <---------ANAC58                        <---------LBD16    ----------------->AGL1 <---------ANAC58                    ------>ZmHOX2a(1) -------STY1(1)        <----------DOF2                         ================HOX2a_HOX2a      <---- ------>STY1(1)  --------->ANAC55(2)        <------------------------ANAC81<---------YAB1      ====== ----->TOE2(2)   <---------ANAC55(2)     <----------DOF2    ------>ZmHOX2a(1)                  <----- -HVH21       <---------ARR14(2) <---------O2               ===================HOX2a_HOX2a<---------HSFB2a(2) ----->TOE1(2)--------->ARR14(2) --------->TGA1a    <<<<<<<<<TBF1 <---------LBD16         --------->HSFB2a(2)   ctagggtcccaaactggatacttgactttgggtacacgtctcactttaatcttcttcttctcctccttctcgggatcatccttgttcatcttctcgagga  6418200                                                                     --------->WRKY12                                                                     ----------->HVH21                                                     --------->TOE1(2)                                                    <---------HSFC1(2)         <---------WRKY12                           <---------HSFB2a(1)        <------ZmHOX2a(2)                           --------->HSFC1(2)       <---------ARR11(3)                           --------->HSFB2a(1)       <-----------ARR10   <---------HSFB2a(1)     ------->TEIL      --------->WRKY45       --------->ARR11(3)  <---------HSFC1(2)      --------->SPL7  <----------DOF2 =HOX2a_HOX2a              --------->HSFB2a(1)   <---------SPL7   <---------ANAC46 -----ARR14(2)         ----------->HVH21       --------------->AtSPL8--------->WRKY38(1) --------->ANAC46 ==============HOX2a_HOX2a --------->HSFC1(2) <---------At5g28300 <---------ANAC58       --------->ANAC58 -ZmHOX2a(1)       <----------DOF2           <-----------GT1      <---------ANAC58       --------->ANAC58   actcgtgaagatcaacgcttcctttgcgacgcttcgtctcgcttaattcaccgtaccttcgagctatggctttgaccttctctctctcttcaggccatgt  6418300                          ----------->TGA1                          ----------->HVH21                        --------->At4g35610                    --------->MYB52(1)                   ----------->HVH21                  --------->LBD16                 --------->ANAC46                                          ---------->DOF2                 <---------ANAC55(2)                                 <----------DOF2                 --------->ANAC55(2)      <-----------HVH21    <----------DOF2         <---------MYB52(1)                ------>ZmHOX2a(2)        --------->bZIP60(1)<---------ARR11(3)        <-------GAMYB          <---------MYB52(1) <---------ANAC46           ---------->DOF2 --------->TOE2(3)   <--------  <---------At4g35610   <---------At4g35610----------->HVH21--------->ARR11(3)       <-----------RAV1(1)   cttaagctctccgtttgatccgtaacagatgacgcagacatcgatgtcacagagaattgaaagctctttagctttcttaaagacagtctgttgtcttttg  6418400                                               ---------->DOF2                                         <---------ANAC46                                    <------MYB83 <---------TOE2(3)                                    <------MYB46(1)                                       <------ZmHOX2a(1)                         --------->DAG2  <---------ANAC58                                <----------ID1                        ---------->DOF2  <---------ANAC58                      ---------->DOF2                   >>>>>>>>>TBF1   <---------TOE2(3)         <<<<<<<<<TBF1   --------->ANAC58 --DOF2      <---------HSFB2a(2)   --------->MYB59       ---------->ID1      --------->ANAC58    >>>>   atcaaacttgtggccctcgaagaagaaaaagcagaattaggtttcttgaaaaaggttttgttcttcttcgatgttgaaaacgaaagagaagaggacgaag  6418500                                                      <---------ANAC58                                                      <---------ANAC58                    -----------                                                  <------------CBF                        <<<<<<<<<<<                                                 <---------ICU4                          <-----------                                                 --------->ATHB12                        <-----------                                                --------->ICU4           --------->TOE2(3)<----------               --------->ARR14(2)         <---------DEAR3(1)      ----------->TBP   <---------GLK1(2)               <---------ARR14(2)         --------->ALFIN1      ----------->TBP  --------->HSFB2a(2) --------->ANAC58                         <---------AtMYB61    --------->AHL20(1)<---------HSFB2a(2) --------->ANAC58--------->KAN4(2)     --------->ALFIN1   <---------ANAC46<---------MYB52(1) >>>>>TBF1  <---------ANAC46<------------CBF    <---------YAB1 <---------ARR11(3)--------->HSFC1(1)   aagaagccatggttgtgtatattctctgtgaattgaatgaagaggtggtgatcattgtttgcgaatatataaaacccttagttcgagaatttctattttt  6418600                              <---------YAB1                            <---------ICU4                            --------->YAB1                  <-----------GT1                ----------->TGA1      --------->At5g28300  <---------AHL20(2)          >>>>>>>>>GT-2------------>CBF                    --------->AHL20(2)       ----------->GT1 <---------ATHB12                <----------DOF2 ---->AGL15  <---------AHL20(2)      ----------->GT1  <---------DAG2       <---------YAB1 <<AGL25--------->At5g28300--------->ICU4        <------------CBF   <---------DAG2       --------->AHL20(2) ------AGL2  --------->AHL20(2) ---------->DOF2 --------->ATHB12    <----------DOF2      <---------AHL20(2) ------AGL3 <---------YAB1 <---------ATHB51 --------->ARR11(3)   <-----------GT1       <-----------TBP -----AGL15 --------->ICU4 <---------ATHB12 <---------ARR11(3)  <---------AHL20(1) ------------>CBF<-   ggtctcgctcggtaattaatgacgaatcaataatgaaagcggtgaagatttcattgccttttttaatatacttttttctcatagaatcaatttatatgtt  6418700                  --------->YAB1                         --------->ARR11(3)               <-----------------AGL1                    <---------ARR11(3)               <-----------------AG                     <---------GLK1(1)              <-----------GT1                       <---------TOE2(3)  --------->GLK1(2)     <-------TEIL      --------->ALFIN1<---------TOE2(3)          <---------YAB1       <---------GLK1(2)  <-------TEIL      <---------REM1(1) <------ZmHOX2a(1)<-------GAMYB  --------->GLK1(1)            ------->TEIL --------TOE2(3)<---------------AGL15   <---------MYB46(3)  <----------DOF2          <-------TEIL   taacgaaggtgtagttttactaataaggaaaactttggtttttggttgaatattatggaaatctttagtagagattcttttcacatgtacatacatacac  6418800                                         --------->ANAC58                                         <---------ANAC55(2)                                         --------->ANAC55(1)                                         --------->ANAC55(2)                                         --------->ANAC46                                         --------->ANAC58  <---------ALFIN1                                  <-----------GT1         <---------ZAT14                         <--     <-------TEIL             <---------AHL20(2)          --------->ZAT18                         --- <-------TEIL                 --------->AHL20(2)          --------->ZAT14                      ------   aaatacatacactgatatacacacacatagatttatatactatacgtaatgtatacatactacactgcgattcgactaaaaatttggatttttcgaaagt  6418900                               <---------AHL20(2)                              <---------AHL20(1)                              <---------AHL20(2)                              --------->AHL20(2)    <-----------GT1        --------->WOX13(1)  --------->YAB1        --------->TOE2(3)       <----------DOF2 -------AHL20(2)       --------->REM1(1)  <---------ANAC58 ------>AHL20(2)      <-------TEIL        <---------ANAC58 ----->GT1        ----------->GT1    <-----------RAV1(1)                          <-----------GT1   ttaattatactacatatgtttagttacatcaattaatttgtgttgtttggctatatgtaagtctataatctatcgtttctgtataaactatttgaatgtt  6419000  Previous    Next  AGI:  At3g18650.1    Description:  AGL103 (AGAMOUS-LIKE 103); transcription factor. similar to AGL52, transcription factor [Arabidopsis thaliana] (TAIR:AT4G11250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81313.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70587.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 6417350    to: 6418510    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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